RNA–Protein interactions for RNA: ENST00000409828.7

PAX3-208, Transcript of paired box 3, humanhuman

TSL 1 (best) BASIC

Gene PAX3, Length 1,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX3-208ENST00000409828 TEX19Q8NA77 164 aa16.76■□□□□ 0.27
PAX3-208ENST00000409828 GOLM1Q8NBJ4 401 aa16.76■□□□□ 0.27
PAX3-208ENST00000409828 MDS2Q8NDY4 140 aa16.76■□□□□ 0.27
PAX3-208ENST00000409828 BBC3Q96PG8 261 aaPredicted RBP16.76■□□□□ 0.27
PAX3-208ENST00000409828 PHF12Q96QT6 1004 aa16.76■□□□□ 0.27
PAX3-208ENST00000409828 NXF5Q9H1B4 397 aaKnown RBP16.76■□□□□ 0.27
PAX3-208ENST00000409828 ANKRA2Q9H9E1 313 aa16.76■□□□□ 0.27
PAX3-208ENST00000409828 ZCCHC3Q9NUD5 404 aaKnown RBP16.76■□□□□ 0.27
PAX3-208ENST00000409828 PLA2G3Q9NZ20 509 aa16.76■□□□□ 0.27
PAX3-208ENST00000409828 LRFN1Q9P244 771 aa16.76■□□□□ 0.27
PAX3-208ENST00000409828 ERVK-11Q9UQG0 969 aa16.76■□□□□ 0.27
PAX3-208ENST00000409828 A8MVJ9 347 aa16.75■□□□□ 0.27
PAX3-208ENST00000409828 SHOX2O60902 331 aaPredicted RBP16.75■□□□□ 0.27
PAX3-208ENST00000409828 NEURL1O76050 574 aa16.75■□□□□ 0.27
PAX3-208ENST00000409828 ZCCHC18P0CG32 403 aa16.75■□□□□ 0.27
PAX3-208ENST00000409828 EFNA1P20827 205 aaPredicted RBP16.75■□□□□ 0.27
PAX3-208ENST00000409828 UQCRC2P22695 453 aa16.75■□□□□ 0.27
PAX3-208ENST00000409828 SOX3P41225 446 aa16.75■□□□□ 0.27
PAX3-208ENST00000409828 MAGEA8P43361 318 aa16.75■□□□□ 0.27
PAX3-208ENST00000409828 CD97P48960 835 aa16.75■□□□□ 0.27
PAX3-208ENST00000409828 TXNL4AP83876 142 aaKnown RBP16.75■□□□□ 0.27
PAX3-208ENST00000409828 OR1C1Q15619 314 aa16.75■□□□□ 0.27
PAX3-208ENST00000409828 MAPKAPK3Q16644 382 aa16.75■□□□□ 0.27
PAX3-208ENST00000409828 ZNF791Q3KP31 576 aaPredicted RBP16.75■□□□□ 0.27
PAX3-208ENST00000409828 CYP27C1Q4G0S4 372 aa16.75■□□□□ 0.27
PAX3-208ENST00000409828 ZNF468Q5VIY5 522 aaPredicted RBP16.75■□□□□ 0.27
PAX3-208ENST00000409828 OR4A15Q8NGL6 344 aa16.75■□□□□ 0.27
PAX3-208ENST00000409828 SPACA9Q96E40 222 aaPredicted RBP16.75■□□□□ 0.27
PAX3-208ENST00000409828 SPDL1Q96EA4 605 aa16.75■□□□□ 0.27
PAX3-208ENST00000409828 ITCHQ96J02 903 aa16.75■□□□□ 0.27
PAX3-208ENST00000409828 SECISBP2Q96T21 854 aaKnown RBP16.75■□□□□ 0.27
PAX3-208ENST00000409828 ELAC2Q9BQ52 826 aaKnown RBP16.75■□□□□ 0.27
PAX3-208ENST00000409828 EPN3Q9H201 632 aa16.75■□□□□ 0.27
PAX3-208ENST00000409828 LIN28AQ9H9Z2 209 aaKnown RBP16.75■□□□□ 0.27
PAX3-208ENST00000409828 SLC52A3Q9NQ40 469 aa16.75■□□□□ 0.27
PAX3-208ENST00000409828 SERHLQ9NQF3 203 aa16.75■□□□□ 0.27
PAX3-208ENST00000409828 SAR1AQ9NR31 198 aa16.75■□□□□ 0.27
PAX3-208ENST00000409828 HPF1Q9NWY4 346 aa16.75■□□□□ 0.27
PAX3-208ENST00000409828 CCDC167Q9P0B6 97 aa16.75■□□□□ 0.27
PAX3-208ENST00000409828 ADAM21Q9UKJ8 722 aa16.75■□□□□ 0.27
PAX3-208ENST00000409828 SNX8Q9Y5X2 465 aa16.75■□□□□ 0.27
PAX3-208ENST00000409828 NPFFR2Q9Y5X5 522 aa16.75■□□□□ 0.27
PAX3-208ENST00000409828 A0A1W2PP18 115 aa16.74■□□□□ 0.27
PAX3-208ENST00000409828 CCDC154A6NI56 674 aa16.74■□□□□ 0.27
PAX3-208ENST00000409828 ZNF354AO60765 605 aaPredicted RBP16.74■□□□□ 0.27
PAX3-208ENST00000409828 CCDC22O60826 627 aa16.74■□□□□ 0.27
PAX3-208ENST00000409828 ABCB7O75027 752 aa16.74■□□□□ 0.27
PAX3-208ENST00000409828 NKX2-2O95096 273 aa16.74■□□□□ 0.27
PAX3-208ENST00000409828 HMGN2P05204 90 aaKnown RBP16.74■□□□□ 0.27
PAX3-208ENST00000409828 CD46P15529 392 aa16.74■□□□□ 0.27
PAX3-208ENST00000409828 ABCD3P28288 659 aa16.74■□□□□ 0.27
PAX3-208ENST00000409828 OC90Q02509 493 aaPredicted RBP16.74■□□□□ 0.27
PAX3-208ENST00000409828 ZNF169Q14929 603 aaPredicted RBP16.74■□□□□ 0.27
PAX3-208ENST00000409828 INAQ16352 499 aa16.74■□□□□ 0.27
PAX3-208ENST00000409828 NTRK2Q16620 822 aa16.74■□□□□ 0.27
PAX3-208ENST00000409828 AGKQ53H12 422 aa16.74■□□□□ 0.27
PAX3-208ENST00000409828 SOWAHCQ53LP3 525 aaPredicted RBP16.74■□□□□ 0.27
PAX3-208ENST00000409828 SLC6A19Q695T7 634 aa16.74■□□□□ 0.27
PAX3-208ENST00000409828 MFSD12Q6NUT3 480 aa16.74■□□□□ 0.27
PAX3-208ENST00000409828 C16orf47Q6ZP98 133 aaPredicted RBP16.74■□□□□ 0.27
PAX3-208ENST00000409828 RTL4Q6ZR62 310 aa16.74■□□□□ 0.27
PAX3-208ENST00000409828 PIGWQ7Z7B1 504 aa16.74■□□□□ 0.27
PAX3-208ENST00000409828 ANKRD46Q86W74 232 aa16.74■□□□□ 0.27
PAX3-208ENST00000409828 ZNF227Q86WZ6 799 aa16.74■□□□□ 0.27
PAX3-208ENST00000409828 CYP4Z2PQ8N1L4 340 aa16.74■□□□□ 0.27
PAX3-208ENST00000409828 DNAJB8Q8NHS0 232 aa16.74■□□□□ 0.27
PAX3-208ENST00000409828 MIPOL1Q8TD10 442 aa16.74■□□□□ 0.27
PAX3-208ENST00000409828 SCMH1Q96GD3 660 aa16.74■□□□□ 0.27
PAX3-208ENST00000409828 PANX1Q96RD7 426 aa16.74■□□□□ 0.27
PAX3-208ENST00000409828 STACQ99469 402 aa16.74■□□□□ 0.27
PAX3-208ENST00000409828 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.74■□□□□ 0.27
PAX3-208ENST00000409828 Q9N2J8 555 aa16.74■□□□□ 0.27
PAX3-208ENST00000409828 DUSP22Q9NRW4 184 aa16.74■□□□□ 0.27
PAX3-208ENST00000409828 GPATCH2Q9NW75 528 aa16.74■□□□□ 0.27
PAX3-208ENST00000409828 VPS4AQ9UN37 437 aa16.74■□□□□ 0.27
PAX3-208ENST00000409828 PRRC2CQ9Y520 2896 aaKnown RBP16.74■□□□□ 0.27
PAX3-208ENST00000409828 EML6Q6ZMW3 1958 aa16.73■□□□□ 0.27
PAX3-208ENST00000409828 C9JVG2 144 aa16.73■□□□□ 0.27
PAX3-208ENST00000409828 RFXANKO14593 260 aa16.73■□□□□ 0.27
PAX3-208ENST00000409828 OR6B1O95007 311 aa16.73■□□□□ 0.27
PAX3-208ENST00000409828 CPSF4O95639 269 aaKnown RBP16.73■□□□□ 0.27
PAX3-208ENST00000409828 ABCB1P08183 1280 aaPredicted RBP16.73■□□□□ 0.27
PAX3-208ENST00000409828 ZNF155Q12901 538 aaPredicted RBP16.73■□□□□ 0.27
PAX3-208ENST00000409828 SPDYE7PQ495Y7 208 aa16.73■□□□□ 0.27
PAX3-208ENST00000409828 TIGD2Q4W5G0 525 aa16.73■□□□□ 0.27
PAX3-208ENST00000409828 CDC73Q6P1J9 531 aa16.73■□□□□ 0.27
PAX3-208ENST00000409828 TMEM81Q6P7N7 255 aa16.73■□□□□ 0.27
PAX3-208ENST00000409828 NPSR1Q6W5P4 371 aa16.73■□□□□ 0.27
PAX3-208ENST00000409828 SLC34A3Q8N130 599 aa16.73■□□□□ 0.27
PAX3-208ENST00000409828 TMEM178AQ8NBL3 297 aa16.73■□□□□ 0.27
PAX3-208ENST00000409828 GTF2H4Q92759 462 aa16.73■□□□□ 0.27
PAX3-208ENST00000409828 TMEM125Q96AQ2 219 aa16.73■□□□□ 0.27
PAX3-208ENST00000409828 MAGED4Q96JG8 741 aa16.73■□□□□ 0.27
PAX3-208ENST00000409828 SIGLEC12Q96PQ1 595 aa16.73■□□□□ 0.27
PAX3-208ENST00000409828 ACTRT3Q9BYD9 372 aa16.73■□□□□ 0.27
PAX3-208ENST00000409828 SH2D2AQ9NP31 389 aa16.73■□□□□ 0.27
PAX3-208ENST00000409828 TIMMDC1Q9NPL8 285 aa16.73■□□□□ 0.27
PAX3-208ENST00000409828 MRTO4Q9UKD2 239 aaKnown RBP16.73■□□□□ 0.27
PAX3-208ENST00000409828 SMG1Q96Q15 3661 aaKnown RBP16.73■□□□□ 0.27
PAX3-208ENST00000409828 RNF103-CHMP3A0A140T963 221 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 106.2 ms