RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 ALDH3B2P48448 385 aa2.81□□□□□ -1.96
PMS1-203ENST00000409593 UCP2P55851 309 aa2.81□□□□□ -1.96
PMS1-203ENST00000409593 NLRP11P59045 1033 aaKnown RBP2.81□□□□□ -1.96
PMS1-203ENST00000409593 KRTAP10-8P60410 259 aa2.81□□□□□ -1.96
PMS1-203ENST00000409593 SMC1AQ14683 1233 aaKnown RBP2.81□□□□□ -1.96
PMS1-203ENST00000409593 BNIPLQ7Z465 357 aa2.81□□□□□ -1.96
PMS1-203ENST00000409593 CEND1Q8N111 149 aa2.81□□□□□ -1.96
PMS1-203ENST00000409593 MLKLQ8NB16 471 aa2.81□□□□□ -1.96
PMS1-203ENST00000409593 FAM122AQ96E09 287 aa2.81□□□□□ -1.96
PMS1-203ENST00000409593 NLNQ9BYT8 704 aa2.81□□□□□ -1.96
PMS1-203ENST00000409593 TMEM9Q9P0T7 183 aa2.81□□□□□ -1.96
PMS1-203ENST00000409593 COPS7AQ9UBW8 275 aa2.81□□□□□ -1.96
PMS1-203ENST00000409593 APOBEC3BQ9UH17 382 aaKnown RBP2.81□□□□□ -1.96
PMS1-203ENST00000409593 ZNF175Q9Y473 711 aa2.81□□□□□ -1.96
PMS1-203ENST00000409593 LRRK1Q38SD2 2015 aa2.8□□□□□ -1.96
PMS1-203ENST00000409593 TNRQ92752 1358 aa2.8□□□□□ -1.96
PMS1-203ENST00000409593 SLC17A2O00624 439 aa2.8□□□□□ -1.96
PMS1-203ENST00000409593 ECDO95905 644 aaPredicted RBP2.8□□□□□ -1.96
PMS1-203ENST00000409593 AREGP15514 252 aa2.8□□□□□ -1.96
PMS1-203ENST00000409593 CTNNA1P35221 906 aaKnown RBP2.8□□□□□ -1.96
PMS1-203ENST00000409593 ACVR1BP36896 505 aa2.8□□□□□ -1.96
PMS1-203ENST00000409593 NPY2RP49146 381 aa2.8□□□□□ -1.96
PMS1-203ENST00000409593 METAP1P53582 386 aa2.8□□□□□ -1.96
PMS1-203ENST00000409593 KIAA1024LP59773 190 aa2.8□□□□□ -1.96
PMS1-203ENST00000409593 PDE7AQ13946 482 aa2.8□□□□□ -1.96
PMS1-203ENST00000409593 GLYR1Q49A26 553 aaPredicted RBP2.8□□□□□ -1.96
PMS1-203ENST00000409593 TOM1L2Q6ZVM7 507 aa2.8□□□□□ -1.96
PMS1-203ENST00000409593 CADM2Q8N3J6 435 aa2.8□□□□□ -1.96
PMS1-203ENST00000409593 PSMA8Q8TAA3 256 aa2.8□□□□□ -1.96
PMS1-203ENST00000409593 FNDC8Q8TC99 324 aa2.8□□□□□ -1.96
PMS1-203ENST00000409593 HCAR1Q9BXC0 346 aa2.8□□□□□ -1.96
PMS1-203ENST00000409593 NMUR2Q9GZQ4 415 aa2.8□□□□□ -1.96
PMS1-203ENST00000409593 TRPV6Q9H1D0 765 aa2.8□□□□□ -1.96
PMS1-203ENST00000409593 ISG20L2Q9H9L3 353 aaKnown RBP2.8□□□□□ -1.96
PMS1-203ENST00000409593 PIGVQ9NUD9 493 aa2.8□□□□□ -1.96
PMS1-203ENST00000409593 NDUFA13Q9P0J0 144 aa2.8□□□□□ -1.96
PMS1-203ENST00000409593 KLHDC2Q9Y2U9 406 aa2.8□□□□□ -1.96
PMS1-203ENST00000409593 FLVCR1Q9Y5Y0 555 aa2.8□□□□□ -1.96
PMS1-203ENST00000409593 CCDC69A6NI79 296 aa2.79□□□□□ -1.96
PMS1-203ENST00000409593 CPN1P15169 458 aa2.79□□□□□ -1.96
PMS1-203ENST00000409593 OR3A4PP47883 348 aa2.79□□□□□ -1.96
PMS1-203ENST00000409593 POU3F4P49335 361 aa2.79□□□□□ -1.96
PMS1-203ENST00000409593 NOP14P78316 857 aaKnown RBP2.79□□□□□ -1.96
PMS1-203ENST00000409593 CCZ1BP86790 482 aa2.79□□□□□ -1.96
PMS1-203ENST00000409593 CCZ1P86791 482 aaPredicted RBP2.79□□□□□ -1.96
PMS1-203ENST00000409593 EIF4EBP2Q13542 120 aaPredicted RBP2.79□□□□□ -1.96
PMS1-203ENST00000409593 EIF2B1Q14232 305 aaKnown RBP2.79□□□□□ -1.96
PMS1-203ENST00000409593 CMPK2Q5EBM0 449 aa2.79□□□□□ -1.96
PMS1-203ENST00000409593 PRAMEF7Q5VXH5 474 aa2.79□□□□□ -1.96
PMS1-203ENST00000409593 PRR5LQ6MZQ0 368 aa2.79□□□□□ -1.96
PMS1-203ENST00000409593 IYDQ6PHW0 289 aa2.79□□□□□ -1.96
PMS1-203ENST00000409593 CCDC91Q7Z6B0 441 aa2.79□□□□□ -1.96
PMS1-203ENST00000409593 C14orf178Q8N769 122 aaPredicted RBP2.79□□□□□ -1.96
PMS1-203ENST00000409593 SETD7Q8WTS6 366 aaKnown RBP2.79□□□□□ -1.96
PMS1-203ENST00000409593 TMEM37Q8WXS4 190 aa2.79□□□□□ -1.96
PMS1-203ENST00000409593 P3H4Q92791 437 aa2.79□□□□□ -1.96
PMS1-203ENST00000409593 FRAT1Q92837 279 aaPredicted RBP2.79□□□□□ -1.96
PMS1-203ENST00000409593 DEFB118Q96PH6 123 aa2.79□□□□□ -1.96
PMS1-203ENST00000409593 SDHCQ99643 169 aaPredicted RBP2.79□□□□□ -1.96
PMS1-203ENST00000409593 C2orf40Q9H1Z8 148 aa2.79□□□□□ -1.96
PMS1-203ENST00000409593 CWC25Q9NXE8 425 aaPredicted RBP2.79□□□□□ -1.96
PMS1-203ENST00000409593 RPS6KB2Q9UBS0 482 aa2.79□□□□□ -1.96
PMS1-203ENST00000409593 WI2-2373I1.2A0A1W2PRP0 233 aa2.79□□□□□ -1.96
PMS1-203ENST00000409593 FMO6PO60774 539 aa2.79□□□□□ -1.96
PMS1-203ENST00000409593 SYNGR4O95473 234 aa2.79□□□□□ -1.96
PMS1-203ENST00000409593 HSPB1P04792 205 aaKnown RBP2.79□□□□□ -1.96
PMS1-203ENST00000409593 APRTP07741 180 aa2.79□□□□□ -1.96
PMS1-203ENST00000409593 HOXB7P09629 217 aa2.79□□□□□ -1.96
PMS1-203ENST00000409593 ZNF18P17022 549 aa2.79□□□□□ -1.96
PMS1-203ENST00000409593 PSMB1P20618 241 aaKnown RBP2.79□□□□□ -1.96
PMS1-203ENST00000409593 IGHV1-2P23083 117 aa2.79□□□□□ -1.96
PMS1-203ENST00000409593 PTBP1P26599 531 aaKnown RBP eCLIP2.79□□□□□ -1.964e-17■■■■■ 65.4
PMS1-203ENST00000409593 RPA1P27694 616 aa2.79□□□□□ -1.96
PMS1-203ENST00000409593 MARCKSP29966 332 aaPredicted RBP2.79□□□□□ -1.96
PMS1-203ENST00000409593 BTG3Q14201 252 aaPredicted RBP2.79□□□□□ -1.96
PMS1-203ENST00000409593 DCAF4L1Q3SXM0 396 aa2.79□□□□□ -1.96
PMS1-203ENST00000409593 ZNF530Q6P9A1 599 aaPredicted RBP2.79□□□□□ -1.96
PMS1-203ENST00000409593 IQCA1Q86XH1 822 aa2.79□□□□□ -1.96
PMS1-203ENST00000409593 C10orf53Q8N6V4 93 aa2.79□□□□□ -1.96
PMS1-203ENST00000409593 PTP4A1Q93096 173 aa2.79□□□□□ -1.96
PMS1-203ENST00000409593 TSSK1BQ9BXA7 367 aa2.79□□□□□ -1.96
PMS1-203ENST00000409593 OPN3Q9H1Y3 402 aaPredicted RBP2.79□□□□□ -1.96
PMS1-203ENST00000409593 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.78□□□□□ -1.96
PMS1-203ENST00000409593 ARPC1BO15143 372 aaKnown RBP2.78□□□□□ -1.96
PMS1-203ENST00000409593 SDC3O75056 442 aa2.78□□□□□ -1.96
PMS1-203ENST00000409593 SERF1AO75920 110 aa2.78□□□□□ -1.96
PMS1-203ENST00000409593 NOL4O94818 638 aa2.78□□□□□ -1.96
PMS1-203ENST00000409593 PGK1P00558 417 aa2.78□□□□□ -1.96
PMS1-203ENST00000409593 H2AFZP0C0S5 128 aa2.78□□□□□ -1.96
PMS1-203ENST00000409593 TMOD1P28289 359 aa2.78□□□□□ -1.96
PMS1-203ENST00000409593 NT5C2P49902 561 aa2.78□□□□□ -1.96
PMS1-203ENST00000409593 ZNF133P52736 654 aaPredicted RBP2.78□□□□□ -1.96
PMS1-203ENST00000409593 DIO3P55073 304 aa2.78□□□□□ -1.96
PMS1-203ENST00000409593 WNT4P56705 351 aa2.78□□□□□ -1.96
PMS1-203ENST00000409593 PUDPQ08623 228 aa2.78□□□□□ -1.96
PMS1-203ENST00000409593 IL18R1Q13478 541 aa2.78□□□□□ -1.96
PMS1-203ENST00000409593 MORF4L2Q15014 288 aa2.78□□□□□ -1.96
PMS1-203ENST00000409593 ZKSCAN8Q15776 578 aaPredicted RBP2.78□□□□□ -1.96
PMS1-203ENST00000409593 LGSNQ5TDP6 509 aa2.78□□□□□ -1.96
PMS1-203ENST00000409593 MEDAGQ5VYS4 303 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms