RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 PLPP5Q8NEB5 264 aa11.81□□□□□ -0.52
CHRNA1-205ENST00000409542 TRPV3Q8NET8 790 aa11.81□□□□□ -0.52
CHRNA1-205ENST00000409542 OR5T3Q8NGG3 340 aa11.81□□□□□ -0.52
CHRNA1-205ENST00000409542 FAM57AQ8TBR7 257 aa11.81□□□□□ -0.52
CHRNA1-205ENST00000409542 ELP5Q8TE02 316 aa11.81□□□□□ -0.52
CHRNA1-205ENST00000409542 ZFAND2BQ8WV99 257 aa11.81□□□□□ -0.52
CHRNA1-205ENST00000409542 PPWD1Q96BP3 646 aaKnown RBP11.81□□□□□ -0.52
CHRNA1-205ENST00000409542 TM4SF19Q96DZ7 209 aa11.81□□□□□ -0.52
CHRNA1-205ENST00000409542 PEX11GQ96HA9 241 aa11.81□□□□□ -0.52
CHRNA1-205ENST00000409542 EGFL8Q99944 293 aa11.81□□□□□ -0.52
CHRNA1-205ENST00000409542 COQ3Q9NZJ6 369 aa11.81□□□□□ -0.52
CHRNA1-205ENST00000409542 EGFL7Q9UHF1 273 aa11.81□□□□□ -0.52
CHRNA1-205ENST00000409542 RNF6Q9Y252 685 aa11.81□□□□□ -0.52
CHRNA1-205ENST00000409542 ACANP16112 2415 aa11.8□□□□□ -0.52
CHRNA1-205ENST00000409542 FEZF1A0PJY2 475 aa11.8□□□□□ -0.52
CHRNA1-205ENST00000409542 MANBAO00462 879 aa11.8□□□□□ -0.52
CHRNA1-205ENST00000409542 CCNDBP1O95273 360 aa11.8□□□□□ -0.52
CHRNA1-205ENST00000409542 GUCA1CO95843 209 aa11.8□□□□□ -0.52
CHRNA1-205ENST00000409542 B3GALT4O96024 378 aa11.8□□□□□ -0.52
CHRNA1-205ENST00000409542 TPOP07202 933 aa11.8□□□□□ -0.52
CHRNA1-205ENST00000409542 MPC1LP0DKB6 136 aa11.8□□□□□ -0.52
CHRNA1-205ENST00000409542 G6PDP11413 515 aa11.8□□□□□ -0.52
CHRNA1-205ENST00000409542 PCSK2P16519 638 aa11.8□□□□□ -0.52
CHRNA1-205ENST00000409542 FASP25445 335 aa11.8□□□□□ -0.52
CHRNA1-205ENST00000409542 IMPA1P29218 277 aa11.8□□□□□ -0.52
CHRNA1-205ENST00000409542 PTGS2P35354 604 aa11.8□□□□□ -0.52
CHRNA1-205ENST00000409542 GGT5P36269 586 aa11.8□□□□□ -0.52
CHRNA1-205ENST00000409542 ARL1P40616 181 aaPredicted RBP11.8□□□□□ -0.52
CHRNA1-205ENST00000409542 PWP1Q13610 501 aa11.8□□□□□ -0.52
CHRNA1-205ENST00000409542 KIAA0040Q15053 153 aa11.8□□□□□ -0.52
CHRNA1-205ENST00000409542 NSDHLQ15738 373 aa11.8□□□□□ -0.52
CHRNA1-205ENST00000409542 RABL3Q5HYI8 236 aa11.8□□□□□ -0.52
CHRNA1-205ENST00000409542 NANOGP8Q6NSW7 305 aa11.8□□□□□ -0.52
CHRNA1-205ENST00000409542 DLEU7Q6UYE1 221 aa11.8□□□□□ -0.52
CHRNA1-205ENST00000409542 ZBTB49Q6ZSB9 765 aa11.8□□□□□ -0.52
CHRNA1-205ENST00000409542 RPS19BP1Q86WX3 136 aaKnown RBP11.8□□□□□ -0.52
CHRNA1-205ENST00000409542 CCDC71Q8IV32 467 aaPredicted RBP11.8□□□□□ -0.52
CHRNA1-205ENST00000409542 SLC5A8Q8N695 610 aa11.8□□□□□ -0.52
CHRNA1-205ENST00000409542 GLB1L3Q8NCI6 653 aaPredicted RBP11.8□□□□□ -0.52
CHRNA1-205ENST00000409542 OR8J3Q8NGG0 315 aa11.8□□□□□ -0.52
CHRNA1-205ENST00000409542 CENPNQ96H22 339 aaPredicted RBP11.8□□□□□ -0.52
CHRNA1-205ENST00000409542 ZBTB18Q99592 522 aa11.8□□□□□ -0.52
CHRNA1-205ENST00000409542 LPAR4Q99677 370 aa11.8□□□□□ -0.52
CHRNA1-205ENST00000409542 SLC29A1Q99808 456 aa11.8□□□□□ -0.52
CHRNA1-205ENST00000409542 GSX1Q9H4S2 264 aaPredicted RBP11.8□□□□□ -0.52
CHRNA1-205ENST00000409542 NANOGQ9H9S0 305 aa11.8□□□□□ -0.52
CHRNA1-205ENST00000409542 EIF3LQ9Y262 564 aaKnown RBP11.8□□□□□ -0.52
CHRNA1-205ENST00000409542 POLR3HQ9Y535 204 aaPredicted RBP11.8□□□□□ -0.52
CHRNA1-205ENST00000409542 VPS13CQ709C8 3753 aa11.8□□□□□ -0.52
CHRNA1-205ENST00000409542 KCNE1BA0A087WTH5 132 aa11.79□□□□□ -0.52
CHRNA1-205ENST00000409542 SLC16A5O15375 505 aa11.79□□□□□ -0.52
CHRNA1-205ENST00000409542 HS6ST1O60243 411 aa11.79□□□□□ -0.52
CHRNA1-205ENST00000409542 STK16O75716 305 aa11.79□□□□□ -0.52
CHRNA1-205ENST00000409542 CATP04040 527 aaKnown RBP11.79□□□□□ -0.52
CHRNA1-205ENST00000409542 C8GP07360 202 aa11.79□□□□□ -0.52
CHRNA1-205ENST00000409542 EPB42P16452 691 aa11.79□□□□□ -0.52
CHRNA1-205ENST00000409542 MSX1P28360 303 aa11.79□□□□□ -0.52
CHRNA1-205ENST00000409542 MEOX1P50221 254 aa11.79□□□□□ -0.52
CHRNA1-205ENST00000409542 SH3BGRP55822 239 aaPredicted RBP11.79□□□□□ -0.52
CHRNA1-205ENST00000409542 OR4D2P58180 307 aa11.79□□□□□ -0.52
CHRNA1-205ENST00000409542 SP140Q13342 867 aa11.79□□□□□ -0.52
CHRNA1-205ENST00000409542 ATP6AP1Q15904 470 aa11.79□□□□□ -0.52
CHRNA1-205ENST00000409542 NRF1Q16656 503 aa11.79□□□□□ -0.52
CHRNA1-205ENST00000409542 CNPY1Q3B7I2 92 aa11.79□□□□□ -0.52
CHRNA1-205ENST00000409542 GGTA1PQ4G0N0 100 aa11.79□□□□□ -0.52
CHRNA1-205ENST00000409542 EMC4Q5J8M3 183 aa11.79□□□□□ -0.52
CHRNA1-205ENST00000409542 THEMIS2Q5TEJ8 643 aa11.79□□□□□ -0.52
CHRNA1-205ENST00000409542 SLC2A7Q6PXP3 512 aa11.79□□□□□ -0.52
CHRNA1-205ENST00000409542 LRRC70Q7Z2Q7 622 aa11.79□□□□□ -0.52
CHRNA1-205ENST00000409542 TMEM200AQ86VY9 491 aa11.79□□□□□ -0.52
CHRNA1-205ENST00000409542 SULF2Q8IWU5 870 aa11.79□□□□□ -0.52
CHRNA1-205ENST00000409542 HORMAD2Q8N7B1 307 aa11.79□□□□□ -0.52
CHRNA1-205ENST00000409542 LILRB4Q8NHJ6 448 aa11.79□□□□□ -0.52
CHRNA1-205ENST00000409542 ASB11Q8WXH4 323 aa11.79□□□□□ -0.52
CHRNA1-205ENST00000409542 CGREF1Q99674 301 aa11.79□□□□□ -0.52
CHRNA1-205ENST00000409542 CIB1Q99828 191 aa11.79□□□□□ -0.52
CHRNA1-205ENST00000409542 C9orf16Q9BUW7 83 aa11.79□□□□□ -0.52
CHRNA1-205ENST00000409542 ANKRD60Q9BZ19 345 aa11.79□□□□□ -0.52
CHRNA1-205ENST00000409542 LIME1Q9H400 295 aa11.79□□□□□ -0.52
CHRNA1-205ENST00000409542 TRIM45Q9H8W5 580 aaPredicted RBP11.79□□□□□ -0.52
CHRNA1-205ENST00000409542 TMEM184CQ9NVA4 438 aa11.79□□□□□ -0.52
CHRNA1-205ENST00000409542 MAGEL2Q9UJ55 1249 aa11.79□□□□□ -0.52
CHRNA1-205ENST00000409542 AURKCQ9UQB9 309 aa11.79□□□□□ -0.52
CHRNA1-205ENST00000409542 AP3M1Q9Y2T2 418 aa11.79□□□□□ -0.52
CHRNA1-205ENST00000409542 RNF11Q9Y3C5 154 aa11.79□□□□□ -0.52
CHRNA1-205ENST00000409542 NAALAD2Q9Y3Q0 740 aa11.79□□□□□ -0.52
CHRNA1-205ENST00000409542 ANKHD1Q8IWZ3 2542 aaKnown RBP11.79□□□□□ -0.52
CHRNA1-205ENST00000409542 MAGEB17A8MXT2 336 aa11.78□□□□□ -0.52
CHRNA1-205ENST00000409542 GFYI3L273 518 aa11.78□□□□□ -0.52
CHRNA1-205ENST00000409542 CDC40O60508 579 aaKnown RBP eCLIP11.78□□□□□ -0.52
CHRNA1-205ENST00000409542 ULK1O75385 1050 aa11.78□□□□□ -0.52
CHRNA1-205ENST00000409542 PDE9AO76083 593 aa11.78□□□□□ -0.52
CHRNA1-205ENST00000409542 CLPTM1O96005 669 aa11.78□□□□□ -0.52
CHRNA1-205ENST00000409542 TFAP2AP05549 437 aa11.78□□□□□ -0.52
CHRNA1-205ENST00000409542 HSD17B2P37059 387 aa11.78□□□□□ -0.52
CHRNA1-205ENST00000409542 PEX19P40855 299 aa11.78□□□□□ -0.52
CHRNA1-205ENST00000409542 MLF1P58340 268 aa11.78□□□□□ -0.52
CHRNA1-205ENST00000409542 RPS15AP62244 130 aaKnown RBP11.78□□□□□ -0.52
CHRNA1-205ENST00000409542 OLR1P78380 273 aa11.78□□□□□ -0.52
CHRNA1-205ENST00000409542 CYP51A1Q16850 503 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms