RNA–Protein interactions for RNA: ENST00000409498.6

SUMO1-207, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3 BASIC

Gene SUMO1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-207ENST00000409498 CD46P15529 392 aa13.63□□□□□ -0.23
SUMO1-207ENST00000409498 ARFIP2P53365 341 aa13.63□□□□□ -0.23
SUMO1-207ENST00000409498 NME5P56597 212 aa13.63□□□□□ -0.23
SUMO1-207ENST00000409498 NRG3P56975 720 aa13.63□□□□□ -0.23
SUMO1-207ENST00000409498 STX1BP61266 288 aa13.63□□□□□ -0.23
SUMO1-207ENST00000409498 PRR5P85299 388 aa13.63□□□□□ -0.23
SUMO1-207ENST00000409498 OC90Q02509 493 aaPredicted RBP13.63□□□□□ -0.23
SUMO1-207ENST00000409498 SQLEQ14534 574 aa13.63□□□□□ -0.23
SUMO1-207ENST00000409498 ZNF766Q5HY98 468 aa13.63□□□□□ -0.23
SUMO1-207ENST00000409498 TMEM81Q6P7N7 255 aa13.63□□□□□ -0.23
SUMO1-207ENST00000409498 PAOXQ6QHF9 649 aa13.63□□□□□ -0.23
SUMO1-207ENST00000409498 NPSR1Q6W5P4 371 aa13.63□□□□□ -0.23
SUMO1-207ENST00000409498 RTL4Q6ZR62 310 aa13.63□□□□□ -0.23
SUMO1-207ENST00000409498 FUNDC1Q8IVP5 155 aa13.63□□□□□ -0.23
SUMO1-207ENST00000409498 CLECL1Q8IZS7 167 aa13.63□□□□□ -0.23
SUMO1-207ENST00000409498 CYP4Z2PQ8N1L4 340 aa13.63□□□□□ -0.23
SUMO1-207ENST00000409498 CPSF7Q8N684 471 aaKnown RBP13.63□□□□□ -0.23
SUMO1-207ENST00000409498 PAQR8Q8TEZ7 354 aa13.63□□□□□ -0.23
SUMO1-207ENST00000409498 NTNG2Q96CW9 530 aa13.63□□□□□ -0.23
SUMO1-207ENST00000409498 THOC1Q96FV9 657 aaKnown RBP13.63□□□□□ -0.23
SUMO1-207ENST00000409498 MARK4Q96L34 752 aa13.63□□□□□ -0.23
SUMO1-207ENST00000409498 MS4A4EQ96PG1 132 aa13.63□□□□□ -0.23
SUMO1-207ENST00000409498 SECISBP2Q96T21 854 aaKnown RBP13.63□□□□□ -0.23
SUMO1-207ENST00000409498 BARD1Q99728 777 aaKnown RBP13.63□□□□□ -0.23
SUMO1-207ENST00000409498 RABEP2Q9H5N1 569 aa13.63□□□□□ -0.23
SUMO1-207ENST00000409498 SLC52A3Q9NQ40 469 aa13.63□□□□□ -0.23
SUMO1-207ENST00000409498 ANKRD10Q9NXR5 420 aa13.63□□□□□ -0.23
SUMO1-207ENST00000409498 COPG1Q9Y678 874 aaKnown RBP13.63□□□□□ -0.23
SUMO1-207ENST00000409498 EXPH5Q8NEV8 1989 aa13.62□□□□□ -0.23
SUMO1-207ENST00000409498 ASPDHA6ND91 283 aa13.62□□□□□ -0.23
SUMO1-207ENST00000409498 NME2P1O60361 137 aa13.62□□□□□ -0.23
SUMO1-207ENST00000409498 SLC25A12O75746 678 aa13.62□□□□□ -0.23
SUMO1-207ENST00000409498 NKX2-2O95096 273 aa13.62□□□□□ -0.23
SUMO1-207ENST00000409498 EFNA1P20827 205 aaPredicted RBP13.62□□□□□ -0.23
SUMO1-207ENST00000409498 NME2P22392 152 aa13.62□□□□□ -0.23
SUMO1-207ENST00000409498 ABCD3P28288 659 aa13.62□□□□□ -0.23
SUMO1-207ENST00000409498 CCT3P49368 545 aaKnown RBP13.62□□□□□ -0.23
SUMO1-207ENST00000409498 TMED10P49755 219 aaKnown RBP13.62□□□□□ -0.23
SUMO1-207ENST00000409498 POLR2JP52435 117 aaKnown RBP13.62□□□□□ -0.23
SUMO1-207ENST00000409498 CYP27C1Q4G0S4 372 aa13.62□□□□□ -0.23
SUMO1-207ENST00000409498 MFSD12Q6NUT3 480 aa13.62□□□□□ -0.23
SUMO1-207ENST00000409498 BLOC1S3Q6QNY0 202 aa13.62□□□□□ -0.23
SUMO1-207ENST00000409498 IL20RBQ6UXL0 311 aa13.62□□□□□ -0.23
SUMO1-207ENST00000409498 SLC34A3Q8N130 599 aa13.62□□□□□ -0.23
SUMO1-207ENST00000409498 CDRT4Q8N9R6 151 aa13.62□□□□□ -0.23
SUMO1-207ENST00000409498 TMEM178AQ8NBL3 297 aa13.62□□□□□ -0.23
SUMO1-207ENST00000409498 OR56A1Q8NGH5 318 aa13.62□□□□□ -0.23
SUMO1-207ENST00000409498 OR9I1Q8NGQ6 314 aa13.62□□□□□ -0.23
SUMO1-207ENST00000409498 TMEM125Q96AQ2 219 aa13.62□□□□□ -0.23
SUMO1-207ENST00000409498 SLC35A4Q96G79 324 aa13.62□□□□□ -0.23
SUMO1-207ENST00000409498 C5orf34Q96MH7 638 aa13.62□□□□□ -0.23
SUMO1-207ENST00000409498 OR52E6Q96RD3 313 aa13.62□□□□□ -0.23
SUMO1-207ENST00000409498 TIMMDC1Q9NPL8 285 aa13.62□□□□□ -0.23
SUMO1-207ENST00000409498 MRGBPQ9NV56 204 aa13.62□□□□□ -0.23
SUMO1-207ENST00000409498 GPATCH2Q9NW75 528 aa13.62□□□□□ -0.23
SUMO1-207ENST00000409498 PCDHGB4Q9UN71 923 aa13.62□□□□□ -0.23
SUMO1-207ENST00000409498 ANKRD33BA6NCL7 494 aa13.61□□□□□ -0.23
SUMO1-207ENST00000409498 TSPAN2O60636 221 aa13.61□□□□□ -0.23
SUMO1-207ENST00000409498 PPM1BO75688 479 aa13.61□□□□□ -0.23
SUMO1-207ENST00000409498 ABCB1P08183 1280 aaPredicted RBP13.61□□□□□ -0.23
SUMO1-207ENST00000409498 LSP1P33241 339 aa13.61□□□□□ -0.23
SUMO1-207ENST00000409498 PRIM2P49643 509 aa13.61□□□□□ -0.23
SUMO1-207ENST00000409498 ST13P50502 369 aaKnown RBP13.61□□□□□ -0.23
SUMO1-207ENST00000409498 DGKQP52824 942 aa13.61□□□□□ -0.23
SUMO1-207ENST00000409498 CORO7P57737 925 aa13.61□□□□□ -0.23
SUMO1-207ENST00000409498 C19orf57Q0VDD7 668 aa13.61□□□□□ -0.23
SUMO1-207ENST00000409498 RCAN2Q14206 197 aa13.61□□□□□ -0.23
SUMO1-207ENST00000409498 MAPKAPK3Q16644 382 aa13.61□□□□□ -0.23
SUMO1-207ENST00000409498 BHLHB9Q6PI77 547 aa13.61□□□□□ -0.23
SUMO1-207ENST00000409498 NUP54Q7Z3B4 507 aa13.61□□□□□ -0.23
SUMO1-207ENST00000409498 MDGA2Q7Z553 956 aa13.61□□□□□ -0.23
SUMO1-207ENST00000409498 PSD4Q8NDX1 1056 aa13.61□□□□□ -0.23
SUMO1-207ENST00000409498 TSPEARQ8WU66 669 aa13.61□□□□□ -0.23
SUMO1-207ENST00000409498 RNF138Q8WVD3 245 aa13.61□□□□□ -0.23
SUMO1-207ENST00000409498 C10orf82Q8WW14 230 aa13.61□□□□□ -0.23
SUMO1-207ENST00000409498 MAGED4Q96JG8 741 aa13.61□□□□□ -0.23
SUMO1-207ENST00000409498 RILPQ96NA2 401 aa13.61□□□□□ -0.23
SUMO1-207ENST00000409498 PHF12Q96QT6 1004 aa13.61□□□□□ -0.23
SUMO1-207ENST00000409498 STACQ99469 402 aa13.61□□□□□ -0.23
SUMO1-207ENST00000409498 SERHLQ9NQF3 203 aa13.61□□□□□ -0.23
SUMO1-207ENST00000409498 ZCCHC3Q9NUD5 404 aaKnown RBP13.61□□□□□ -0.23
SUMO1-207ENST00000409498 CNIH4Q9P003 139 aa13.61□□□□□ -0.23
SUMO1-207ENST00000409498 KLF13Q9Y2Y9 288 aaPredicted RBP13.61□□□□□ -0.23
SUMO1-207ENST00000409498 CHCHD2Q9Y6H1 151 aaPredicted RBP13.61□□□□□ -0.23
SUMO1-207ENST00000409498 GMNCA6NCL1 334 aa13.6□□□□□ -0.23
SUMO1-207ENST00000409498 OR6C70A6NIJ9 312 aa13.6□□□□□ -0.23
SUMO1-207ENST00000409498 C9JVG2 144 aa13.6□□□□□ -0.23
SUMO1-207ENST00000409498 CFLARO15519 480 aa13.6□□□□□ -0.23
SUMO1-207ENST00000409498 NME6O75414 186 aaPredicted RBP13.6□□□□□ -0.23
SUMO1-207ENST00000409498 HMGN2P05204 90 aaKnown RBP13.6□□□□□ -0.23
SUMO1-207ENST00000409498 ZCCHC18P0CG32 403 aa13.6□□□□□ -0.23
SUMO1-207ENST00000409498 CNR1P21554 472 aa13.6□□□□□ -0.23
SUMO1-207ENST00000409498 UQCRC2P22695 453 aa13.6□□□□□ -0.23
SUMO1-207ENST00000409498 MAN2A2P49641 1150 aa13.6□□□□□ -0.23
SUMO1-207ENST00000409498 PNLIPRP2P54317 469 aa13.6□□□□□ -0.23
SUMO1-207ENST00000409498 ZNF155Q12901 538 aaPredicted RBP13.6□□□□□ -0.23
SUMO1-207ENST00000409498 GAB1Q13480 694 aa13.6□□□□□ -0.23
SUMO1-207ENST00000409498 ZNHIT3Q15649 155 aaPredicted RBP13.6□□□□□ -0.23
SUMO1-207ENST00000409498 VPS26BQ4G0F5 336 aa13.6□□□□□ -0.23
SUMO1-207ENST00000409498 SLC22A10Q63ZE4 541 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms