RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 SDC3O75056 442 aa19.38■□□□□ 0.69
USP39-203ENST00000409470 ATP1B1P05026 303 aa19.38■□□□□ 0.69
USP39-203ENST00000409470 RAB38P57729 211 aa19.38■□□□□ 0.69
USP39-203ENST00000409470 NXPH1P58417 271 aa19.38■□□□□ 0.69
USP39-203ENST00000409470 CSNK2BP67870 215 aa19.38■□□□□ 0.69
USP39-203ENST00000409470 MLIPQ5VWP3 458 aa19.38■□□□□ 0.69
USP39-203ENST00000409470 GTF2IRD2BQ6EKJ0 949 aa19.38■□□□□ 0.69
USP39-203ENST00000409470 HEPHL1Q6MZM0 1159 aa19.38■□□□□ 0.69
USP39-203ENST00000409470 Q7L0L9 218 aa19.38■□□□□ 0.69
USP39-203ENST00000409470 GTF2IRD2Q86UP8 949 aa19.38■□□□□ 0.69
USP39-203ENST00000409470 VRK2Q86Y07 508 aa19.38■□□□□ 0.69
USP39-203ENST00000409470 MUL1Q969V5 352 aa19.38■□□□□ 0.69
USP39-203ENST00000409470 ZG16BQ96DA0 208 aa19.38■□□□□ 0.69
USP39-203ENST00000409470 RHNO1Q9BSD3 238 aa19.38■□□□□ 0.69
USP39-203ENST00000409470 UCK2Q9BZX2 261 aa19.38■□□□□ 0.69
USP39-203ENST00000409470 NAA50Q9GZZ1 169 aaKnown RBP19.38■□□□□ 0.69
USP39-203ENST00000409470 ADAP2Q9NPF8 381 aa19.38■□□□□ 0.69
USP39-203ENST00000409470 DSPPQ9NZW4 1301 aa19.38■□□□□ 0.69
USP39-203ENST00000409470 LILRA5A6NI73 299 aa19.37■□□□□ 0.69
USP39-203ENST00000409470 H3BMQ9 156 aa19.37■□□□□ 0.69
USP39-203ENST00000409470 RGS10O43665 173 aa19.37■□□□□ 0.69
USP39-203ENST00000409470 ITIH1P19827 911 aa19.37■□□□□ 0.69
USP39-203ENST00000409470 PCMT1P22061 227 aa19.37■□□□□ 0.69
USP39-203ENST00000409470 POU1F1P28069 291 aa19.37■□□□□ 0.69
USP39-203ENST00000409470 UGT2B15P54855 530 aa19.37■□□□□ 0.69
USP39-203ENST00000409470 EMX1Q04741 257 aaPredicted RBP19.37■□□□□ 0.69
USP39-203ENST00000409470 PTGES3Q15185 160 aaKnown RBP19.37■□□□□ 0.69
USP39-203ENST00000409470 CWF19L1Q69YN2 538 aaKnown RBP19.37■□□□□ 0.69
USP39-203ENST00000409470 IPCEF1Q8WWN9 437 aaPredicted RBP19.37■□□□□ 0.69
USP39-203ENST00000409470 TCTN2Q96GX1 697 aa19.37■□□□□ 0.69
USP39-203ENST00000409470 COG8Q96MW5 612 aa19.37■□□□□ 0.69
USP39-203ENST00000409470 CACYBPQ9HB71 228 aaKnown RBP19.37■□□□□ 0.69
USP39-203ENST00000409470 WARS2Q9UGM6 360 aaKnown RBP19.37■□□□□ 0.69
USP39-203ENST00000409470 C19orf53Q9UNZ5 99 aaPredicted RBP19.37■□□□□ 0.69
USP39-203ENST00000409470 A0A1W2PRQ8 180 aa19.37■□□□□ 0.69
USP39-203ENST00000409470 SYT5O00445 386 aa19.37■□□□□ 0.69
USP39-203ENST00000409470 FCMRO60667 390 aa19.37■□□□□ 0.69
USP39-203ENST00000409470 CSNK1EP49674 416 aaKnown RBP19.37■□□□□ 0.69
USP39-203ENST00000409470 CRISP1P54107 249 aa19.37■□□□□ 0.69
USP39-203ENST00000409470 DGCR6Q14129 220 aa19.37■□□□□ 0.69
USP39-203ENST00000409470 DUSP5Q16690 384 aa19.37■□□□□ 0.69
USP39-203ENST00000409470 PUS10Q3MIT2 529 aaKnown RBP19.37■□□□□ 0.69
USP39-203ENST00000409470 SLC36A4Q6YBV0 504 aa19.37■□□□□ 0.69
USP39-203ENST00000409470 DNAJC22Q8N4W6 341 aa19.37■□□□□ 0.69
USP39-203ENST00000409470 RHOXF1Q8NHV9 184 aa19.37■□□□□ 0.69
USP39-203ENST00000409470 SLC7A13Q8TCU3 470 aa19.37■□□□□ 0.69
USP39-203ENST00000409470 PRRC1Q96M27 445 aa19.37■□□□□ 0.69
USP39-203ENST00000409470 DOK1Q99704 481 aa19.37■□□□□ 0.69
USP39-203ENST00000409470 CTPS2Q9NRF8 586 aa19.37■□□□□ 0.69
USP39-203ENST00000409470 TMEM9Q9P0T7 183 aa19.37■□□□□ 0.69
USP39-203ENST00000409470 MKLN1Q9UL63 735 aa19.37■□□□□ 0.69
USP39-203ENST00000409470 PCDHGB1Q9Y5G3 927 aa19.37■□□□□ 0.69
USP39-203ENST00000409470 PCDHGA10Q9Y5H3 936 aa19.37■□□□□ 0.69
USP39-203ENST00000409470 SH3PXD2BA1X283 911 aa19.36■□□□□ 0.69
USP39-203ENST00000409470 LMO7DNF2Z398 122 aa19.36■□□□□ 0.69
USP39-203ENST00000409470 CHST10O43529 356 aa19.36■□□□□ 0.69
USP39-203ENST00000409470 SRPX2O60687 465 aaPredicted RBP19.36■□□□□ 0.69
USP39-203ENST00000409470 BCKDHBP21953 392 aa19.36■□□□□ 0.69
USP39-203ENST00000409470 CHMP24386 653 aa19.36■□□□□ 0.69
USP39-203ENST00000409470 CTSKP43235 329 aa19.36■□□□□ 0.69
USP39-203ENST00000409470 MAPK10P53779 464 aa19.36■□□□□ 0.69
USP39-203ENST00000409470 CDC42P60953 191 aa19.36■□□□□ 0.69
USP39-203ENST00000409470 TMEM236Q5W0B7 351 aa19.36■□□□□ 0.69
USP39-203ENST00000409470 PODNL1Q6PEZ8 512 aa19.36■□□□□ 0.69
USP39-203ENST00000409470 AHSA2Q719I0 299 aa19.36■□□□□ 0.69
USP39-203ENST00000409470 ABCA7Q8IZY2 2146 aa19.36■□□□□ 0.69
USP39-203ENST00000409470 NLGN4XQ8N0W4 816 aa19.36■□□□□ 0.69
USP39-203ENST00000409470 OR52P1PQ8NH57 321 aa19.36■□□□□ 0.69
USP39-203ENST00000409470 IRAK4Q9NWZ3 460 aa19.36■□□□□ 0.69
USP39-203ENST00000409470 A0A087WV62 115 aa19.35■□□□□ 0.69
USP39-203ENST00000409470 A0A0A6YYC8 382 aaPredicted RBP19.35■□□□□ 0.69
USP39-203ENST00000409470 ZNF99A8MXY4 864 aaPredicted RBP19.35■□□□□ 0.69
USP39-203ENST00000409470 I3L1I5 382 aaPredicted RBP19.35■□□□□ 0.69
USP39-203ENST00000409470 INMTO95050 263 aa19.35■□□□□ 0.69
USP39-203ENST00000409470 MT-ND2P03891 347 aa19.35■□□□□ 0.69
USP39-203ENST00000409470 ACP2P11117 423 aa19.35■□□□□ 0.69
USP39-203ENST00000409470 SOX18P35713 384 aa19.35■□□□□ 0.69
USP39-203ENST00000409470 MAP2K4P45985 399 aa19.35■□□□□ 0.69
USP39-203ENST00000409470 TARDBPQ13148 414 aaKnown RBP eCLIP19.35■□□□□ 0.69
USP39-203ENST00000409470 NDUFA9Q16795 377 aa19.35■□□□□ 0.69
USP39-203ENST00000409470 PRTGQ2VWP7 1150 aa19.35■□□□□ 0.69
USP39-203ENST00000409470 ARHGAP11BQ3KRB8 267 aa19.35■□□□□ 0.69
USP39-203ENST00000409470 FHL5Q5TD97 284 aa19.35■□□□□ 0.69
USP39-203ENST00000409470 CCDC81Q6ZN84 652 aa19.35■□□□□ 0.69
USP39-203ENST00000409470 SVOPQ8N4V2 548 aa19.35■□□□□ 0.69
USP39-203ENST00000409470 FAR1Q8WVX9 515 aa19.35■□□□□ 0.69
USP39-203ENST00000409470 RORBQ92753 470 aa19.35■□□□□ 0.69
USP39-203ENST00000409470 TGM7Q96PF1 710 aa19.35■□□□□ 0.69
USP39-203ENST00000409470 FUZQ9BT04 418 aa19.35■□□□□ 0.69
USP39-203ENST00000409470 DCUN1D5Q9BTE7 237 aa19.35■□□□□ 0.69
USP39-203ENST00000409470 KLHL28Q9NXS3 571 aa19.35■□□□□ 0.69
USP39-203ENST00000409470 ZNF226Q9NYT6 803 aa19.35■□□□□ 0.69
USP39-203ENST00000409470 FTSJ1Q9UET6 329 aa19.35■□□□□ 0.69
USP39-203ENST00000409470 WDR45Q9Y484 360 aa19.35■□□□□ 0.69
USP39-203ENST00000409470 MRPS14O60783 128 aaKnown RBP19.35■□□□□ 0.69
USP39-203ENST00000409470 SLITRK5O94991 958 aa19.35■□□□□ 0.69
USP39-203ENST00000409470 ATE1O95260 518 aa19.35■□□□□ 0.69
USP39-203ENST00000409470 ZIC2O95409 532 aaPredicted RBP19.35■□□□□ 0.69
USP39-203ENST00000409470 OSMP13725 252 aa19.35■□□□□ 0.69
USP39-203ENST00000409470 PRKAR1BP31321 381 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms