RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 CELF6Q96J87 481 aaKnown RBP10.05□□□□□ -0.8
NIF3L1-204ENST00000409357 SLC38A3Q99624 504 aa10.05□□□□□ -0.8
NIF3L1-204ENST00000409357 NIPSNAP1Q9BPW8 284 aa10.05□□□□□ -0.8
NIF3L1-204ENST00000409357 INPP5KQ9BT40 448 aa10.05□□□□□ -0.8
NIF3L1-204ENST00000409357 THAP7Q9BT49 309 aaPredicted RBP10.05□□□□□ -0.8
NIF3L1-204ENST00000409357 SLC25A32Q9H2D1 315 aa10.05□□□□□ -0.8
NIF3L1-204ENST00000409357 KCNK12Q9HB15 430 aa10.05□□□□□ -0.8
NIF3L1-204ENST00000409357 NLE1Q9NVX2 485 aaPredicted RBP10.05□□□□□ -0.8
NIF3L1-204ENST00000409357 DDIT4Q9NX09 232 aa10.05□□□□□ -0.8
NIF3L1-204ENST00000409357 MLXQ9UH92 298 aa10.05□□□□□ -0.8
NIF3L1-204ENST00000409357 DPP7Q9UHL4 492 aa10.05□□□□□ -0.8
NIF3L1-204ENST00000409357 PLCL2Q9UPR0 1127 aa10.05□□□□□ -0.8
NIF3L1-204ENST00000409357 EXO1Q9UQ84 846 aaKnown RBP10.05□□□□□ -0.8
NIF3L1-204ENST00000409357 SNX11Q9Y5W9 270 aa10.05□□□□□ -0.8
NIF3L1-204ENST00000409357 CFAP54Q96N23 3096 aa10.05□□□□□ -0.8
NIF3L1-204ENST00000409357 ZFHX2Q9C0A1 2572 aaPredicted RBP10.04□□□□□ -0.8
NIF3L1-204ENST00000409357 LINC00587B1AMM8 73 aa10.04□□□□□ -0.8
NIF3L1-204ENST00000409357 GTPBP1O00178 669 aaKnown RBP10.04□□□□□ -0.8
NIF3L1-204ENST00000409357 TLR4O00206 839 aa10.04□□□□□ -0.8
NIF3L1-204ENST00000409357 WRBO00258 174 aa10.04□□□□□ -0.8
NIF3L1-204ENST00000409357 EIF1BO60739 113 aaKnown RBP10.04□□□□□ -0.8
NIF3L1-204ENST00000409357 ENTPD6O75354 484 aa10.04□□□□□ -0.8
NIF3L1-204ENST00000409357 OAZ2O95190 189 aa10.04□□□□□ -0.8
NIF3L1-204ENST00000409357 LPLP06858 475 aa10.04□□□□□ -0.8
NIF3L1-204ENST00000409357 NR2F6P10588 404 aa10.04□□□□□ -0.8
NIF3L1-204ENST00000409357 PKMP14618 531 aaKnown RBP10.04□□□□□ -0.8
NIF3L1-204ENST00000409357 CPN1P15169 458 aa10.04□□□□□ -0.8
NIF3L1-204ENST00000409357 ENGP17813 658 aa10.04□□□□□ -0.8
NIF3L1-204ENST00000409357 RHCEP18577 417 aa10.04□□□□□ -0.8
NIF3L1-204ENST00000409357 PRPS1L1P21108 318 aa10.04□□□□□ -0.8
NIF3L1-204ENST00000409357 ACSL1P33121 698 aa10.04□□□□□ -0.8
NIF3L1-204ENST00000409357 CNR2P34972 360 aa10.04□□□□□ -0.8
NIF3L1-204ENST00000409357 HSD17B2P37059 387 aa10.04□□□□□ -0.8
NIF3L1-204ENST00000409357 RFC3P40938 356 aa10.04□□□□□ -0.8
NIF3L1-204ENST00000409357 EIF1P41567 113 aaKnown RBP10.04□□□□□ -0.8
NIF3L1-204ENST00000409357 CLCN7P51798 805 aa10.04□□□□□ -0.8
NIF3L1-204ENST00000409357 RPS7P62081 194 aaKnown RBP10.04□□□□□ -0.8
NIF3L1-204ENST00000409357 SIGLEC14Q08ET2 396 aa10.04□□□□□ -0.8
NIF3L1-204ENST00000409357 DYRK1AQ13627 763 aa10.04□□□□□ -0.8
NIF3L1-204ENST00000409357 GPR68Q15743 365 aa10.04□□□□□ -0.8
NIF3L1-204ENST00000409357 TAF12Q16514 161 aa10.04□□□□□ -0.8
NIF3L1-204ENST00000409357 ZNF528Q3MIS6 628 aa10.04□□□□□ -0.8
NIF3L1-204ENST00000409357 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.04□□□□□ -0.8
NIF3L1-204ENST00000409357 TEX30Q5JUR7 227 aa10.04□□□□□ -0.8
NIF3L1-204ENST00000409357 ARTNQ5T4W7 220 aa10.04□□□□□ -0.8
NIF3L1-204ENST00000409357 LIPKQ5VXJ0 399 aa10.04□□□□□ -0.8
NIF3L1-204ENST00000409357 SLC22A10Q63ZE4 541 aa10.04□□□□□ -0.8
NIF3L1-204ENST00000409357 LDB1Q86U70 411 aaPredicted RBP10.04□□□□□ -0.8
NIF3L1-204ENST00000409357 KRTCAP2Q8N6L1 136 aa10.04□□□□□ -0.8
NIF3L1-204ENST00000409357 TOP6BLQ8N6T0 577 aa10.04□□□□□ -0.8
NIF3L1-204ENST00000409357 OR8J2Q8NGG1 315 aa10.04□□□□□ -0.8
NIF3L1-204ENST00000409357 OR5M9Q8NGP3 310 aa10.04□□□□□ -0.8
NIF3L1-204ENST00000409357 OR10Q1Q8NGQ4 319 aa10.04□□□□□ -0.8
NIF3L1-204ENST00000409357 ASB13Q8WXK3 278 aa10.04□□□□□ -0.8
NIF3L1-204ENST00000409357 EDEM1Q92611 657 aa10.04□□□□□ -0.8
NIF3L1-204ENST00000409357 MYO19Q96H55 970 aa10.04□□□□□ -0.8
NIF3L1-204ENST00000409357 SENP5Q96HI0 755 aaPredicted RBP10.04□□□□□ -0.8
NIF3L1-204ENST00000409357 TCEAL7Q9BRU2 100 aa10.04□□□□□ -0.8
NIF3L1-204ENST00000409357 RPP25Q9BUL9 199 aaKnown RBP10.04□□□□□ -0.8
NIF3L1-204ENST00000409357 SARGQ9BW04 601 aa10.04□□□□□ -0.8
NIF3L1-204ENST00000409357 IPPKQ9H8X2 491 aa10.04□□□□□ -0.8
NIF3L1-204ENST00000409357 TMEM184CQ9NVA4 438 aa10.04□□□□□ -0.8
NIF3L1-204ENST00000409357 ZSCAN32Q9NX65 697 aa10.04□□□□□ -0.8
NIF3L1-204ENST00000409357 PPP1R14DQ9NXH3 145 aa10.04□□□□□ -0.8
NIF3L1-204ENST00000409357 COMMD3Q9UBI1 195 aa10.04□□□□□ -0.8
NIF3L1-204ENST00000409357 SEC14L3Q9UDX4 400 aa10.04□□□□□ -0.8
NIF3L1-204ENST00000409357 CLEC2DQ9UHP7 191 aa10.04□□□□□ -0.8
NIF3L1-204ENST00000409357 MKL2Q9ULH7 1088 aa10.04□□□□□ -0.8
NIF3L1-204ENST00000409357 ZNF451Q9Y4E5 1061 aa10.04□□□□□ -0.8
NIF3L1-204ENST00000409357 PCDHB11Q9Y5F2 797 aa10.04□□□□□ -0.8
NIF3L1-204ENST00000409357 MCRIP1C9JLW8 97 aa10.03□□□□□ -0.8
NIF3L1-204ENST00000409357 MANBAO00462 879 aa10.03□□□□□ -0.8
NIF3L1-204ENST00000409357 PRRG1O14668 218 aa10.03□□□□□ -0.8
NIF3L1-204ENST00000409357 RGS11O94810 467 aa10.03□□□□□ -0.8
NIF3L1-204ENST00000409357 OR2A4O95047 310 aa10.03□□□□□ -0.8
NIF3L1-204ENST00000409357 HPP00738 406 aa10.03□□□□□ -0.8
NIF3L1-204ENST00000409357 HLA-DPB1P04440 258 aa10.03□□□□□ -0.8
NIF3L1-204ENST00000409357 HNRNPA1P09651 372 aaKnown RBP eCLIP10.03□□□□□ -0.8
NIF3L1-204ENST00000409357 LAMP2P13473 410 aa10.03□□□□□ -0.8
NIF3L1-204ENST00000409357 OSMP13725 252 aa10.03□□□□□ -0.8
NIF3L1-204ENST00000409357 SPI1P17947 270 aa10.03□□□□□ -0.8
NIF3L1-204ENST00000409357 CCR2P41597 374 aa10.03□□□□□ -0.8
NIF3L1-204ENST00000409357 KIR3DL1P43629 444 aa10.03□□□□□ -0.8
NIF3L1-204ENST00000409357 XCR1P46094 333 aa10.03□□□□□ -0.8
NIF3L1-204ENST00000409357 CENPAP49450 140 aa10.03□□□□□ -0.8
NIF3L1-204ENST00000409357 VEGFCP49767 419 aa10.03□□□□□ -0.8
NIF3L1-204ENST00000409357 NR0B1P51843 470 aaKnown RBP10.03□□□□□ -0.8
NIF3L1-204ENST00000409357 AKR1D1P51857 326 aa10.03□□□□□ -0.8
NIF3L1-204ENST00000409357 CRYBA2P53672 197 aa10.03□□□□□ -0.8
NIF3L1-204ENST00000409357 MXD1Q05195 221 aa10.03□□□□□ -0.8
NIF3L1-204ENST00000409357 C2orf80Q0P641 193 aa10.03□□□□□ -0.8
NIF3L1-204ENST00000409357 STX4Q12846 297 aa10.03□□□□□ -0.8
NIF3L1-204ENST00000409357 BOP1Q14137 746 aaKnown RBP10.03□□□□□ -0.8
NIF3L1-204ENST00000409357 UBXN2BQ14CS0 331 aa10.03□□□□□ -0.8
NIF3L1-204ENST00000409357 HECTD3Q5T447 861 aa10.03□□□□□ -0.8
NIF3L1-204ENST00000409357 HES5Q5TA89 166 aa10.03□□□□□ -0.8
NIF3L1-204ENST00000409357 RAET1GQ6H3X3 334 aa10.03□□□□□ -0.8
NIF3L1-204ENST00000409357 ZNF770Q6IQ21 691 aaPredicted RBP10.03□□□□□ -0.8
NIF3L1-204ENST00000409357 KIAA1211LQ6NV74 962 aa10.03□□□□□ -0.8
NIF3L1-204ENST00000409357 BAIAP2L2Q6UXY1 529 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms