RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 PPP1R3AQ16821 1122 aa11.49□□□□□ -0.57
SMCR8-201ENST00000406438 TMEM173Q86WV6 379 aaPredicted RBP11.49□□□□□ -0.57
SMCR8-201ENST00000406438 TSACCQ96A04 125 aaPredicted RBP11.49□□□□□ -0.57
SMCR8-201ENST00000406438 SIX2Q9NPC8 291 aa11.49□□□□□ -0.57
SMCR8-201ENST00000406438 METTL25Q8N6Q8 603 aa11.49□□□□□ -0.57
SMCR8-201ENST00000406438 HERPUD2Q9BSE4 406 aa11.49□□□□□ -0.57
SMCR8-201ENST00000406438 OR2S2Q9NQN1 319 aa11.49□□□□□ -0.57
SMCR8-201ENST00000406438 UNCXA6NJT0 531 aa11.49□□□□□ -0.57
SMCR8-201ENST00000406438 A8MV72 311 aaPredicted RBP11.49□□□□□ -0.57
SMCR8-201ENST00000406438 JUPP14923 745 aa11.49□□□□□ -0.57
SMCR8-201ENST00000406438 ZNF43P17038 809 aa11.49□□□□□ -0.57
SMCR8-201ENST00000406438 CYCSP99999 105 aaKnown RBP11.49□□□□□ -0.57
SMCR8-201ENST00000406438 ABHD17BQ5VST6 288 aa11.49□□□□□ -0.57
SMCR8-201ENST00000406438 UNC5DQ6UXZ4 953 aa11.49□□□□□ -0.57
SMCR8-201ENST00000406438 RPS27LQ71UM5 84 aaKnown RBP11.49□□□□□ -0.57
SMCR8-201ENST00000406438 MAMDC2Q7Z304 686 aaPredicted RBP11.49□□□□□ -0.57
SMCR8-201ENST00000406438 GALNT10Q86SR1 603 aa11.49□□□□□ -0.57
SMCR8-201ENST00000406438 OR6Q1Q8NGQ2 317 aa11.49□□□□□ -0.57
SMCR8-201ENST00000406438 RNF39Q9H2S5 420 aa11.49□□□□□ -0.57
SMCR8-201ENST00000406438 RLIMQ9NVW2 624 aa11.49□□□□□ -0.57
SMCR8-201ENST00000406438 RBPJLQ9UBG7 517 aa11.49□□□□□ -0.57
SMCR8-201ENST00000406438 GRPRP30550 384 aa11.48□□□□□ -0.57
SMCR8-201ENST00000406438 S100A7P31151 101 aa11.48□□□□□ -0.57
SMCR8-201ENST00000406438 NKX3-2P78367 333 aa11.48□□□□□ -0.57
SMCR8-201ENST00000406438 AKR1C8PQ5T2L2 129 aa11.48□□□□□ -0.57
SMCR8-201ENST00000406438 CCDC28AQ8IWP9 274 aa11.48□□□□□ -0.57
SMCR8-201ENST00000406438 PM20D2Q8IYS1 436 aa11.48□□□□□ -0.57
SMCR8-201ENST00000406438 ACBD7Q8N6N7 88 aa11.48□□□□□ -0.57
SMCR8-201ENST00000406438 SGCZQ96LD1 299 aa11.48□□□□□ -0.57
SMCR8-201ENST00000406438 B4GALT6Q9UBX8 382 aa11.48□□□□□ -0.57
SMCR8-201ENST00000406438 C5AR1P21730 350 aa11.48□□□□□ -0.57
SMCR8-201ENST00000406438 OR2T4Q8NH00 348 aa11.48□□□□□ -0.57
SMCR8-201ENST00000406438 HUS1BQ8NHY5 278 aa11.48□□□□□ -0.57
SMCR8-201ENST00000406438 CCNL2Q96S94 520 aaPredicted RBP11.48□□□□□ -0.57
SMCR8-201ENST00000406438 RARRES3Q9UL19 164 aa11.48□□□□□ -0.57
SMCR8-201ENST00000406438 ATXN7L1Q9ULK2 861 aaPredicted RBP11.48□□□□□ -0.57
SMCR8-201ENST00000406438 TP53TG5Q9Y2B4 290 aa11.48□□□□□ -0.57
SMCR8-201ENST00000406438 ZNF487B1APH4 448 aa11.48□□□□□ -0.57
SMCR8-201ENST00000406438 LILRB5O75023 590 aa11.48□□□□□ -0.57
SMCR8-201ENST00000406438 DNAJB6O75190 326 aa11.48□□□□□ -0.57
SMCR8-201ENST00000406438 HPRP00739 348 aa11.48□□□□□ -0.57
SMCR8-201ENST00000406438 LMAN2Q12907 356 aa11.48□□□□□ -0.57
SMCR8-201ENST00000406438 KLBQ86Z14 1044 aa11.48□□□□□ -0.57
SMCR8-201ENST00000406438 ACSL6Q9UKU0 697 aa11.48□□□□□ -0.57
SMCR8-201ENST00000406438 INMT-MINDY4F8WBC2 141 aa11.48□□□□□ -0.57
SMCR8-201ENST00000406438 CNTN5O94779 1100 aa11.48□□□□□ -0.57
SMCR8-201ENST00000406438 MPC1LP0DKB6 136 aa11.48□□□□□ -0.57
SMCR8-201ENST00000406438 C6orf136Q5SQH8 315 aa11.48□□□□□ -0.57
SMCR8-201ENST00000406438 OR52E8Q6IFG1 317 aa11.48□□□□□ -0.57
SMCR8-201ENST00000406438 Q6ZVL8 140 aa11.48□□□□□ -0.57
SMCR8-201ENST00000406438 UEVLDQ8IX04 471 aa11.48□□□□□ -0.57
SMCR8-201ENST00000406438 FBXL8Q96CD0 374 aa11.48□□□□□ -0.57
SMCR8-201ENST00000406438 FBRSQ9HAH7 460 aa11.48□□□□□ -0.57
SMCR8-201ENST00000406438 WRAP73Q9P2S5 460 aaPredicted RBP11.48□□□□□ -0.57
SMCR8-201ENST00000406438 TGM5O43548 720 aa11.48□□□□□ -0.57
SMCR8-201ENST00000406438 OR14L1PQ8NHC6 308 aa11.48□□□□□ -0.57
SMCR8-201ENST00000406438 ANKRD34BA5PLL1 514 aa11.48□□□□□ -0.57
SMCR8-201ENST00000406438 PRPS1P60891 318 aa11.48□□□□□ -0.57
SMCR8-201ENST00000406438 LANCL3Q6ZV70 420 aa11.48□□□□□ -0.57
SMCR8-201ENST00000406438 PEX11GQ96HA9 241 aa11.48□□□□□ -0.57
SMCR8-201ENST00000406438 TXN2Q99757 166 aa11.48□□□□□ -0.57
SMCR8-201ENST00000406438 C8orf33Q9H7E9 229 aaPredicted RBP11.48□□□□□ -0.57
SMCR8-201ENST00000406438 TOXO94900 526 aa11.47□□□□□ -0.57
SMCR8-201ENST00000406438 HHEXQ03014 270 aa11.47□□□□□ -0.57
SMCR8-201ENST00000406438 RING1Q06587 406 aa11.47□□□□□ -0.57
SMCR8-201ENST00000406438 LEG1Q6P5S2 330 aa11.47□□□□□ -0.57
SMCR8-201ENST00000406438 CHCHD4Q8N4Q1 142 aa11.47□□□□□ -0.57
SMCR8-201ENST00000406438 OR51T1Q8NGJ9 327 aa11.47□□□□□ -0.57
SMCR8-201ENST00000406438 FKBP10Q96AY3 582 aa11.47□□□□□ -0.57
SMCR8-201ENST00000406438 LRR1Q96L50 414 aa11.47□□□□□ -0.57
SMCR8-201ENST00000406438 DPH7Q9BTV6 452 aa11.47□□□□□ -0.57
SMCR8-201ENST00000406438 CDH20Q9HBT6 801 aa11.47□□□□□ -0.57
SMCR8-201ENST00000406438 SUOXP51687 545 aa11.47□□□□□ -0.57
SMCR8-201ENST00000406438 RAB5BP61020 215 aa11.47□□□□□ -0.57
SMCR8-201ENST00000406438 PTPRCAPQ14761 206 aa11.47□□□□□ -0.57
SMCR8-201ENST00000406438 NXPE4Q6UWF7 544 aa11.47□□□□□ -0.57
SMCR8-201ENST00000406438 ZNF852Q6ZMS4 543 aa11.47□□□□□ -0.57
SMCR8-201ENST00000406438 ZNF610Q8N9Z0 462 aa11.47□□□□□ -0.57
SMCR8-201ENST00000406438 CNIH3Q8TBE1 160 aa11.47□□□□□ -0.57
SMCR8-201ENST00000406438 SSX3Q99909 188 aa11.47□□□□□ -0.57
SMCR8-201ENST00000406438 HIPK2Q9H2X6 1198 aa11.47□□□□□ -0.57
SMCR8-201ENST00000406438 ZNF217O75362 1048 aa11.47□□□□□ -0.57
SMCR8-201ENST00000406438 C7P10643 843 aa11.47□□□□□ -0.57
SMCR8-201ENST00000406438 SLC2A5P22732 501 aa11.47□□□□□ -0.57
SMCR8-201ENST00000406438 MAP2K3P46734 347 aa11.47□□□□□ -0.57
SMCR8-201ENST00000406438 CAMLGP49069 296 aa11.47□□□□□ -0.57
SMCR8-201ENST00000406438 STK19P49842 368 aaPredicted RBP11.47□□□□□ -0.57
SMCR8-201ENST00000406438 SNTB2Q13425 540 aaKnown RBP11.47□□□□□ -0.57
SMCR8-201ENST00000406438 ZNF648Q5T619 568 aaPredicted RBP11.47□□□□□ -0.57
SMCR8-201ENST00000406438 TXNRD3NBQ6F5E7 133 aa11.47□□□□□ -0.57
SMCR8-201ENST00000406438 KDELC1Q6UW63 502 aa11.47□□□□□ -0.57
SMCR8-201ENST00000406438 IGKV6D-41A0A0C4DH26 115 aa11.47□□□□□ -0.57
SMCR8-201ENST00000406438 SPHARQ15513 63 aa11.47□□□□□ -0.57
SMCR8-201ENST00000406438 TMEM201Q5SNT2 666 aa11.47□□□□□ -0.57
SMCR8-201ENST00000406438 CES4AQ5XG92 561 aa11.47□□□□□ -0.57
SMCR8-201ENST00000406438 FRS2Q8WU20 508 aa11.47□□□□□ -0.57
SMCR8-201ENST00000406438 FOLH1BQ9HBA9 442 aa11.47□□□□□ -0.57
SMCR8-201ENST00000406438 POLE4Q9NR33 117 aa11.47□□□□□ -0.57
SMCR8-201ENST00000406438 SCAMP2O15127 329 aaKnown RBP11.47□□□□□ -0.57
SMCR8-201ENST00000406438 JRKO75564 520 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms