RNA–Protein interactions for RNA: ENST00000405807.8

COL4A3BP-204, Transcript of collagen type IV alpha 3 binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A3BP, Length 2,843 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-204ENST00000405807 NEU1Q99519 415 aa15.33■□□□□ 0.04
COL4A3BP-204ENST00000405807 RIMS4Q9H426 269 aaPredicted RBP15.33■□□□□ 0.04
COL4A3BP-204ENST00000405807 ANKRD19PQ9H560 264 aa15.33■□□□□ 0.04
COL4A3BP-204ENST00000405807 FTSJ1Q9UET6 329 aa15.33■□□□□ 0.04
COL4A3BP-204ENST00000405807 SSR3Q9UNL2 185 aa15.33■□□□□ 0.04
COL4A3BP-204ENST00000405807 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.32■□□□□ 0.04
COL4A3BP-204ENST00000405807 POM121CA8CG34 1229 aa15.32■□□□□ 0.04
COL4A3BP-204ENST00000405807 AGAP14A8MT82 685 aa15.32■□□□□ 0.04
COL4A3BP-204ENST00000405807 MYL12BO14950 172 aa15.32■□□□□ 0.04
COL4A3BP-204ENST00000405807 MMP20O60882 483 aa15.32■□□□□ 0.04
COL4A3BP-204ENST00000405807 VNN2O95498 520 aa15.32■□□□□ 0.04
COL4A3BP-204ENST00000405807 IL33O95760 270 aa15.32■□□□□ 0.04
COL4A3BP-204ENST00000405807 H2AFB1P0C5Y9 115 aa15.32■□□□□ 0.04
COL4A3BP-204ENST00000405807 H2AFB2P0C5Z0 115 aa15.32■□□□□ 0.04
COL4A3BP-204ENST00000405807 OR56A5P0C7T3 313 aa15.32■□□□□ 0.04
COL4A3BP-204ENST00000405807 MYL12AP19105 171 aa15.32■□□□□ 0.04
COL4A3BP-204ENST00000405807 PRMT2P55345 433 aa15.32■□□□□ 0.04
COL4A3BP-204ENST00000405807 RBBP4Q09028 425 aa15.32■□□□□ 0.04
COL4A3BP-204ENST00000405807 SCARB2Q14108 478 aa15.32■□□□□ 0.04
COL4A3BP-204ENST00000405807 GLYR1Q49A26 553 aaPredicted RBP15.32■□□□□ 0.04
COL4A3BP-204ENST00000405807 GCNT6Q5T4J0 391 aa15.32■□□□□ 0.04
COL4A3BP-204ENST00000405807 MEDAGQ5VYS4 303 aa15.32■□□□□ 0.04
COL4A3BP-204ENST00000405807 KLHL17Q6TDP4 642 aa15.32■□□□□ 0.04
COL4A3BP-204ENST00000405807 C12orf45Q8N5I9 185 aaPredicted RBP15.32■□□□□ 0.04
COL4A3BP-204ENST00000405807 FAM181AQ8N9Y4 354 aa15.32■□□□□ 0.04
COL4A3BP-204ENST00000405807 AQP11Q8NBQ7 271 aa15.32■□□□□ 0.04
COL4A3BP-204ENST00000405807 OR9Q1Q8NGQ5 310 aa15.32■□□□□ 0.04
COL4A3BP-204ENST00000405807 WDR20Q8TBZ3 569 aa15.32■□□□□ 0.04
COL4A3BP-204ENST00000405807 COQ8BQ96D53 544 aa15.32■□□□□ 0.04
COL4A3BP-204ENST00000405807 SPACA7Q96KW9 195 aa15.32■□□□□ 0.04
COL4A3BP-204ENST00000405807 TREX2Q9BQ50 279 aaPredicted RBP15.32■□□□□ 0.04
COL4A3BP-204ENST00000405807 PDCD10Q9BUL8 212 aa15.32■□□□□ 0.04
COL4A3BP-204ENST00000405807 ATG10Q9H0Y0 220 aa15.32■□□□□ 0.04
COL4A3BP-204ENST00000405807 LYARQ9NX58 379 aaKnown RBP15.32■□□□□ 0.04
COL4A3BP-204ENST00000405807 LSM2Q9Y333 95 aaKnown RBP15.32■□□□□ 0.04
COL4A3BP-204ENST00000405807 PRAMEF25A6NGN4 478 aa15.32■□□□□ 0.04
COL4A3BP-204ENST00000405807 J3KTA2 159 aa15.32■□□□□ 0.04
COL4A3BP-204ENST00000405807 PSMD9O00233 223 aa15.32■□□□□ 0.04
COL4A3BP-204ENST00000405807 SLC16A5O15375 505 aa15.32■□□□□ 0.04
COL4A3BP-204ENST00000405807 COCHO43405 550 aa15.32■□□□□ 0.04
COL4A3BP-204ENST00000405807 MPC2O95563 127 aa15.32■□□□□ 0.04
COL4A3BP-204ENST00000405807 CFDP00746 253 aaPredicted RBP15.32■□□□□ 0.04
COL4A3BP-204ENST00000405807 ANXA4P09525 319 aaPredicted RBP15.32■□□□□ 0.04
COL4A3BP-204ENST00000405807 ETFAP13804 333 aa15.32■□□□□ 0.04
COL4A3BP-204ENST00000405807 IDSP22304 550 aa15.32■□□□□ 0.04
COL4A3BP-204ENST00000405807 ITGB7P26010 798 aa15.32■□□□□ 0.04
COL4A3BP-204ENST00000405807 XCR1P46094 333 aa15.32■□□□□ 0.04
COL4A3BP-204ENST00000405807 LIMS1P48059 325 aa15.32■□□□□ 0.04
COL4A3BP-204ENST00000405807 SMSP52788 366 aa15.32■□□□□ 0.04
COL4A3BP-204ENST00000405807 DOC2BQ14184 412 aa15.32■□□□□ 0.04
COL4A3BP-204ENST00000405807 LARS2Q15031 903 aaKnown RBP15.32■□□□□ 0.04
COL4A3BP-204ENST00000405807 SF1Q15637 639 aaKnown RBP15.32■□□□□ 0.04
COL4A3BP-204ENST00000405807 XKR6Q5GH73 641 aa15.32■□□□□ 0.04
COL4A3BP-204ENST00000405807 SLC35F1Q5T1Q4 408 aa15.32■□□□□ 0.04
COL4A3BP-204ENST00000405807 ARHGAP11AQ6P4F7 1023 aa15.32■□□□□ 0.04
COL4A3BP-204ENST00000405807 TPGS1Q6ZTW0 290 aa15.32■□□□□ 0.04
COL4A3BP-204ENST00000405807 SLC34A3Q8N130 599 aa15.32■□□□□ 0.04
COL4A3BP-204ENST00000405807 P2RY13Q9BPV8 354 aa15.32■□□□□ 0.04
COL4A3BP-204ENST00000405807 CPEB1Q9BZB8 566 aaKnown RBP15.32■□□□□ 0.04
COL4A3BP-204ENST00000405807 C11orf54Q9H0W9 315 aaPredicted RBP15.32■□□□□ 0.04
COL4A3BP-204ENST00000405807 SLC25A19Q9HC21 320 aa15.32■□□□□ 0.04
COL4A3BP-204ENST00000405807 RNF181Q9P0P0 153 aa15.32■□□□□ 0.04
COL4A3BP-204ENST00000405807 SH3BP4Q9P0V3 963 aa15.32■□□□□ 0.04
COL4A3BP-204ENST00000405807 ING4Q9UNL4 249 aa15.32■□□□□ 0.04
COL4A3BP-204ENST00000405807 TRPM7Q96QT4 1865 aa15.32■□□□□ 0.04
COL4A3BP-204ENST00000405807 MGAT4DA6NG13 374 aa15.31■□□□□ 0.04
COL4A3BP-204ENST00000405807 A8MXK9 166 aa15.31■□□□□ 0.04
COL4A3BP-204ENST00000405807 RNASET2O00584 256 aaKnown RBP15.31■□□□□ 0.04
COL4A3BP-204ENST00000405807 SELENOFO60613 162 aa15.31■□□□□ 0.04
COL4A3BP-204ENST00000405807 ENTPD6O75354 484 aa15.31■□□□□ 0.04
COL4A3BP-204ENST00000405807 MPC1LP0DKB6 136 aa15.31■□□□□ 0.04
COL4A3BP-204ENST00000405807 TIMP2P16035 220 aa15.31■□□□□ 0.04
COL4A3BP-204ENST00000405807 LAP3P28838 519 aa15.31■□□□□ 0.04
COL4A3BP-204ENST00000405807 KIR2DL3P43628 341 aa15.31■□□□□ 0.04
COL4A3BP-204ENST00000405807 RRAS2P62070 204 aaPredicted RBP15.31■□□□□ 0.04
COL4A3BP-204ENST00000405807 RTL4Q6ZR62 310 aa15.31■□□□□ 0.04
COL4A3BP-204ENST00000405807 MS4A15Q8N5U1 240 aa15.31■□□□□ 0.04
COL4A3BP-204ENST00000405807 OR8D4Q8NGM9 314 aa15.31■□□□□ 0.04
COL4A3BP-204ENST00000405807 C2CD4CQ8TF44 421 aa15.31■□□□□ 0.04
COL4A3BP-204ENST00000405807 CMSS1Q9BQ75 279 aaKnown RBP15.31■□□□□ 0.04
COL4A3BP-204ENST00000405807 MBD1Q9UIS9 605 aaPredicted RBP15.31■□□□□ 0.04
COL4A3BP-204ENST00000405807 MAB21L2Q9Y586 359 aa15.31■□□□□ 0.04
COL4A3BP-204ENST00000405807 LAMA2P24043 3122 aaKnown RBP15.31■□□□□ 0.04
COL4A3BP-204ENST00000405807 HYKKA2RU49 373 aa15.31■□□□□ 0.04
COL4A3BP-204ENST00000405807 CARNS1A5YM72 827 aa15.31■□□□□ 0.04
COL4A3BP-204ENST00000405807 ARRDC5A6NEK1 342 aa15.31■□□□□ 0.04
COL4A3BP-204ENST00000405807 FABP12A6NFH5 140 aa15.31■□□□□ 0.04
COL4A3BP-204ENST00000405807 MPTX1A8MV57 137 aa15.31■□□□□ 0.04
COL4A3BP-204ENST00000405807 GASTP01350 101 aa15.31■□□□□ 0.04
COL4A3BP-204ENST00000405807 IRF1P10914 325 aa15.31■□□□□ 0.04
COL4A3BP-204ENST00000405807 NR2C1P13056 603 aa15.31■□□□□ 0.04
COL4A3BP-204ENST00000405807 ZNF8P17098 575 aaPredicted RBP15.31■□□□□ 0.04
COL4A3BP-204ENST00000405807 PFN3P60673 137 aa15.31■□□□□ 0.04
COL4A3BP-204ENST00000405807 IRF4Q15306 451 aa15.31■□□□□ 0.04
COL4A3BP-204ENST00000405807 COX20Q5RI15 118 aa15.31■□□□□ 0.04
COL4A3BP-204ENST00000405807 RGMBQ6NW40 437 aa15.31■□□□□ 0.04
COL4A3BP-204ENST00000405807 KDF1Q8NAX2 398 aaPredicted RBP15.31■□□□□ 0.04
COL4A3BP-204ENST00000405807 HJURPQ8NCD3 748 aaPredicted RBP15.31■□□□□ 0.04
COL4A3BP-204ENST00000405807 GPR26Q8NDV2 337 aa15.31■□□□□ 0.04
COL4A3BP-204ENST00000405807 NFKBIDQ8NI38 313 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms