RNA–Protein interactions for RNA: ENST00000405546.7

ATG4B-206, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2 BASIC

Gene ATG4B, Length 3,294 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-206ENST00000405546 HHIPQ96QV1 700 aa14.19□□□□□ -0.14
ATG4B-206ENST00000405546 PRR14Q9BWN1 585 aa14.19□□□□□ -0.14
ATG4B-206ENST00000405546 B3GAT2Q9NPZ5 323 aa14.19□□□□□ -0.14
ATG4B-206ENST00000405546 TEX10Q9NXF1 929 aaPredicted RBP14.19□□□□□ -0.14
ATG4B-206ENST00000405546 HEPACAM2A8MVW5 462 aa14.18□□□□□ -0.14
ATG4B-206ENST00000405546 M0R3H8 397 aa14.18□□□□□ -0.14
ATG4B-206ENST00000405546 FOXE1O00358 373 aaPredicted RBP14.18□□□□□ -0.14
ATG4B-206ENST00000405546 SEMG1P04279 462 aa14.18□□□□□ -0.14
ATG4B-206ENST00000405546 MYOGP15173 224 aa14.18□□□□□ -0.14
ATG4B-206ENST00000405546 UQCRC2P22695 453 aa14.18□□□□□ -0.14
ATG4B-206ENST00000405546 DDX6P26196 483 aaKnown RBP eCLIP14.18□□□□□ -0.14
ATG4B-206ENST00000405546 ETV6P41212 452 aa14.18□□□□□ -0.14
ATG4B-206ENST00000405546 RPS5P46782 204 aaKnown RBP14.18□□□□□ -0.14
ATG4B-206ENST00000405546 SUZ12Q15022 739 aaKnown RBP14.18□□□□□ -0.14
ATG4B-206ENST00000405546 IDO2Q6ZQW0 420 aa14.18□□□□□ -0.14
ATG4B-206ENST00000405546 GET4Q7L5D6 327 aaPredicted RBP14.18□□□□□ -0.14
ATG4B-206ENST00000405546 RDH10Q8IZV5 341 aa14.18□□□□□ -0.14
ATG4B-206ENST00000405546 SETD6Q8TBK2 473 aa14.18□□□□□ -0.14
ATG4B-206ENST00000405546 GATAD2BQ8WXI9 593 aa14.18□□□□□ -0.14
ATG4B-206ENST00000405546 MS4A7Q9GZW8 240 aaPredicted RBP14.18□□□□□ -0.14
ATG4B-206ENST00000405546 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.18□□□□□ -0.141e-8■□□□□ 10
ATG4B-206ENST00000405546 MYNNQ9NPC7 610 aa14.18□□□□□ -0.14
ATG4B-206ENST00000405546 SLC13A4Q9UKG4 626 aa14.18□□□□□ -0.14
ATG4B-206ENST00000405546 LOC105369274A0A096LPK9 316 aa14.18□□□□□ -0.14
ATG4B-206ENST00000405546 TLR4O00206 839 aa14.18□□□□□ -0.14
ATG4B-206ENST00000405546 MYL12BO14950 172 aa14.18□□□□□ -0.14
ATG4B-206ENST00000405546 TLX2O43763 284 aaPredicted RBP14.18□□□□□ -0.14
ATG4B-206ENST00000405546 PDE9AO76083 593 aa14.18□□□□□ -0.14
ATG4B-206ENST00000405546 ARSBP15848 533 aa14.18□□□□□ -0.14
ATG4B-206ENST00000405546 MYL12AP19105 171 aa14.18□□□□□ -0.14
ATG4B-206ENST00000405546 MAPK9P45984 424 aa14.18□□□□□ -0.14
ATG4B-206ENST00000405546 KHDRBS2Q5VWX1 349 aaKnown RBP14.18□□□□□ -0.14
ATG4B-206ENST00000405546 ERN2Q76MJ5 926 aaKnown RBP14.18□□□□□ -0.14
ATG4B-206ENST00000405546 RRM2BQ7LG56 351 aa14.18□□□□□ -0.14
ATG4B-206ENST00000405546 NRSN1Q8IZ57 195 aa14.18□□□□□ -0.14
ATG4B-206ENST00000405546 OR4N4Q8N0Y3 316 aa14.18□□□□□ -0.14
ATG4B-206ENST00000405546 ESX1Q8N693 406 aa14.18□□□□□ -0.14
ATG4B-206ENST00000405546 AMER3Q8N944 861 aa14.18□□□□□ -0.14
ATG4B-206ENST00000405546 ZNF431Q8TF32 576 aaPredicted RBP14.18□□□□□ -0.14
ATG4B-206ENST00000405546 COQ10AQ96MF6 247 aa14.18□□□□□ -0.14
ATG4B-206ENST00000405546 C1QTNF7Q9BXJ2 289 aa14.18□□□□□ -0.14
ATG4B-206ENST00000405546 CHST8Q9H2A9 424 aa14.18□□□□□ -0.14
ATG4B-206ENST00000405546 IGFLR1Q9H665 355 aa14.18□□□□□ -0.14
ATG4B-206ENST00000405546 TBC1D17Q9HA65 648 aa14.18□□□□□ -0.14
ATG4B-206ENST00000405546 TMEM229AB2RXF0 380 aa14.17□□□□□ -0.14
ATG4B-206ENST00000405546 SOD1P00441 154 aa14.17□□□□□ -0.14
ATG4B-206ENST00000405546 RHCEP18577 417 aa14.17□□□□□ -0.14
ATG4B-206ENST00000405546 ELAVL3Q14576 367 aaKnown RBP14.17□□□□□ -0.14
ATG4B-206ENST00000405546 HNRNPA1L2Q32P51 320 aaKnown RBP14.17□□□□□ -0.14
ATG4B-206ENST00000405546 C9orf64Q5T6V5 341 aa14.17□□□□□ -0.14
ATG4B-206ENST00000405546 KRT74Q7RTS7 529 aa14.17□□□□□ -0.14
ATG4B-206ENST00000405546 COMMD7Q86VX2 200 aa14.17□□□□□ -0.14
ATG4B-206ENST00000405546 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.17□□□□□ -0.14
ATG4B-206ENST00000405546 DOK4Q8TEW6 326 aa14.17□□□□□ -0.14
ATG4B-206ENST00000405546 ZNF514Q96K75 400 aaPredicted RBP14.17□□□□□ -0.14
ATG4B-206ENST00000405546 ART5Q96L15 291 aa14.17□□□□□ -0.14
ATG4B-206ENST00000405546 SGPP1Q9BX95 441 aa14.17□□□□□ -0.14
ATG4B-206ENST00000405546 ANKRA2Q9H9E1 313 aa14.17□□□□□ -0.14
ATG4B-206ENST00000405546 TXNL4BQ9NX01 149 aaKnown RBP14.17□□□□□ -0.14
ATG4B-206ENST00000405546 NPIPB8E9PQR5 432 aa14.17□□□□□ -0.14
ATG4B-206ENST00000405546 INMT-MINDY4F8WBC2 141 aa14.17□□□□□ -0.14
ATG4B-206ENST00000405546 CASKO14936 926 aa14.17□□□□□ -0.14
ATG4B-206ENST00000405546 AKAP8O43823 692 aaKnown RBP14.17□□□□□ -0.14
ATG4B-206ENST00000405546 ARAFP10398 606 aa14.17□□□□□ -0.14
ATG4B-206ENST00000405546 ICAM2P13598 275 aa14.17□□□□□ -0.14
ATG4B-206ENST00000405546 CCR8P51685 355 aa14.17□□□□□ -0.14
ATG4B-206ENST00000405546 LIM2P55344 173 aa14.17□□□□□ -0.14
ATG4B-206ENST00000405546 RPS25P62851 125 aaKnown RBP14.17□□□□□ -0.14
ATG4B-206ENST00000405546 LASP1Q14847 261 aaKnown RBP14.17□□□□□ -0.14
ATG4B-206ENST00000405546 ZNF750Q32MQ0 723 aa14.17□□□□□ -0.14
ATG4B-206ENST00000405546 DCUN1D3Q8IWE4 304 aa14.17□□□□□ -0.14
ATG4B-206ENST00000405546 CCDC116Q8IYX3 515 aa14.17□□□□□ -0.14
ATG4B-206ENST00000405546 ZBTB44Q8NCP5 570 aa14.17□□□□□ -0.14
ATG4B-206ENST00000405546 OR2L2Q8NH16 312 aa14.17□□□□□ -0.14
ATG4B-206ENST00000405546 AKAP1Q92667 903 aaKnown RBP eCLIP14.17□□□□□ -0.141e-6■■■■■ 35.1
ATG4B-206ENST00000405546 RSPRY1Q96DX4 576 aa14.17□□□□□ -0.14
ATG4B-206ENST00000405546 METTL2AQ96IZ6 378 aaKnown RBP14.17□□□□□ -0.14
ATG4B-206ENST00000405546 FNDC11Q9BVV2 318 aa14.17□□□□□ -0.14
ATG4B-206ENST00000405546 QRSL1Q9H0R6 528 aaKnown RBP14.17□□□□□ -0.14
ATG4B-206ENST00000405546 TMEM245Q9H330 911 aa14.17□□□□□ -0.14
ATG4B-206ENST00000405546 TRPM6Q9BX84 2022 aa14.17□□□□□ -0.14
ATG4B-206ENST00000405546 C2orf92A0A1B0GVN3 265 aa14.17□□□□□ -0.14
ATG4B-206ENST00000405546 OR52A4PA6NMU1 304 aa14.17□□□□□ -0.14
ATG4B-206ENST00000405546 HNRNPCL2B2RXH8 293 aa14.17□□□□□ -0.14
ATG4B-206ENST00000405546 SIGLEC5O15389 551 aa14.17□□□□□ -0.14
ATG4B-206ENST00000405546 EFCAB14O75071 495 aa14.17□□□□□ -0.14
ATG4B-206ENST00000405546 SRPRAP08240 638 aaKnown RBP14.17□□□□□ -0.14
ATG4B-206ENST00000405546 XKP51811 444 aa14.17□□□□□ -0.14
ATG4B-206ENST00000405546 NCBP2P52298 156 aaKnown RBP eCLIP14.17□□□□□ -0.142e-8■■■■■ 28.7
ATG4B-206ENST00000405546 LSM11P83369 360 aaKnown RBP eCLIP14.17□□□□□ -0.141e-6■□□□□ 10
ATG4B-206ENST00000405546 MLLT1Q03111 559 aaPredicted RBP14.17□□□□□ -0.14
ATG4B-206ENST00000405546 SIGLEC14Q08ET2 396 aa14.17□□□□□ -0.14
ATG4B-206ENST00000405546 MAB21L1Q13394 359 aa14.17□□□□□ -0.14
ATG4B-206ENST00000405546 PUM1Q14671 1186 aaKnown RBP eCLIP14.17□□□□□ -0.14
ATG4B-206ENST00000405546 DDI2Q5TDH0 399 aa14.17□□□□□ -0.14
ATG4B-206ENST00000405546 LRRTM4Q86VH4 590 aa14.17□□□□□ -0.14
ATG4B-206ENST00000405546 LAS2Q8IYD9 372 aa14.17□□□□□ -0.14
ATG4B-206ENST00000405546 ANKRD53Q8N9V6 530 aa14.17□□□□□ -0.14
ATG4B-206ENST00000405546 TMEM145Q8NBT3 493 aa14.17□□□□□ -0.14
ATG4B-206ENST00000405546 TBC1D20Q96BZ9 403 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms