RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 BCL2L10Q9HD36 194 aa19.61■□□□□ 0.73
TPM1-208ENST00000404484 LANCL2Q9NS86 450 aa19.61■□□□□ 0.73
TPM1-208ENST00000404484 PCDHGB3Q9Y5G1 929 aa19.61■□□□□ 0.73
TPM1-208ENST00000404484 AK5Q9Y6K8 562 aa19.61■□□□□ 0.73
TPM1-208ENST00000404484 ZZEF1O43149 2961 aa19.61■□□□□ 0.73
TPM1-208ENST00000404484 ANKRD11Q6UB99 2663 aaPredicted RBP19.6■□□□□ 0.73
TPM1-208ENST00000404484 TMEM8BA6NDV4 472 aa19.6■□□□□ 0.73
TPM1-208ENST00000404484 SCRG1O75711 98 aa19.6■□□□□ 0.73
TPM1-208ENST00000404484 SEMG1P04279 462 aa19.6■□□□□ 0.73
TPM1-208ENST00000404484 FABP3P05413 133 aa19.6■□□□□ 0.73
TPM1-208ENST00000404484 MAN2A2P49641 1150 aa19.6■□□□□ 0.73
TPM1-208ENST00000404484 MGAT2Q10469 447 aa19.6■□□□□ 0.73
TPM1-208ENST00000404484 ERV3-1Q14264 604 aa19.6■□□□□ 0.73
TPM1-208ENST00000404484 IFI44LQ53G44 452 aa19.6■□□□□ 0.73
TPM1-208ENST00000404484 TRMT12Q53H54 448 aaKnown RBP19.6■□□□□ 0.73
TPM1-208ENST00000404484 PRAMEF17Q5VTA0 474 aa19.6■□□□□ 0.73
TPM1-208ENST00000404484 C16orf62Q7Z3J2 963 aa19.6■□□□□ 0.73
TPM1-208ENST00000404484 ARMC8Q8IUR7 673 aa19.6■□□□□ 0.73
TPM1-208ENST00000404484 PACRGLQ8N7B6 248 aa19.6■□□□□ 0.73
TPM1-208ENST00000404484 ZCCHC14Q8WYQ9 949 aaKnown RBP19.6■□□□□ 0.73
TPM1-208ENST00000404484 TRNT1Q96Q11 434 aaKnown RBP19.6■□□□□ 0.73
TPM1-208ENST00000404484 TREX2Q9BQ50 279 aaPredicted RBP19.6■□□□□ 0.73
TPM1-208ENST00000404484 BTBD2Q9BX70 525 aa19.6■□□□□ 0.73
TPM1-208ENST00000404484 AKAP7Q9P0M2 348 aaPredicted RBP19.6■□□□□ 0.73
TPM1-208ENST00000404484 SCN2AQ99250 2005 aa19.59■□□□□ 0.73
TPM1-208ENST00000404484 A0A0G2JPF8 293 aa19.59■□□□□ 0.73
TPM1-208ENST00000404484 HNRNPCL2B2RXH8 293 aa19.59■□□□□ 0.73
TPM1-208ENST00000404484 HNRNPCL3B7ZW38 293 aa19.59■□□□□ 0.73
TPM1-208ENST00000404484 CST1P01037 141 aa19.59■□□□□ 0.73
TPM1-208ENST00000404484 MT-ND1P03886 318 aa19.59■□□□□ 0.73
TPM1-208ENST00000404484 HNRNPCL4P0DMR1 293 aa19.59■□□□□ 0.73
TPM1-208ENST00000404484 FGF5P12034 268 aa19.59■□□□□ 0.73
TPM1-208ENST00000404484 ETS2P15036 469 aa19.59■□□□□ 0.73
TPM1-208ENST00000404484 CRYBA2P53672 197 aa19.59■□□□□ 0.73
TPM1-208ENST00000404484 BTG2P78543 158 aa19.59■□□□□ 0.73
TPM1-208ENST00000404484 HPCAP84074 193 aa19.59■□□□□ 0.73
TPM1-208ENST00000404484 TAF11Q15544 211 aa19.59■□□□□ 0.73
TPM1-208ENST00000404484 ST3GAL2Q16842 350 aa19.59■□□□□ 0.73
TPM1-208ENST00000404484 C1orf189Q5VU69 101 aa19.59■□□□□ 0.73
TPM1-208ENST00000404484 PIWIL3Q7Z3Z3 882 aaKnown RBP19.59■□□□□ 0.73
TPM1-208ENST00000404484 ZDHHC19Q8WVZ1 309 aaPredicted RBP19.59■□□□□ 0.73
TPM1-208ENST00000404484 NXPE2Q96DL1 559 aa19.59■□□□□ 0.73
TPM1-208ENST00000404484 PTCHD1Q96NR3 888 aa19.59■□□□□ 0.73
TPM1-208ENST00000404484 ADAP2Q9NPF8 381 aa19.59■□□□□ 0.73
TPM1-208ENST00000404484 GIN1Q9NXP7 522 aa19.59■□□□□ 0.73
TPM1-208ENST00000404484 DKK4Q9UBT3 224 aa19.59■□□□□ 0.73
TPM1-208ENST00000404484 MYOCOSA0A1B0GUC4 107 aa19.58■□□□□ 0.73
TPM1-208ENST00000404484 EFCAB7A8K855 629 aa19.58■□□□□ 0.73
TPM1-208ENST00000404484 H0YJX3 145 aa19.58■□□□□ 0.73
TPM1-208ENST00000404484 TGFBR3LH3BV60 316 aa19.58■□□□□ 0.73
TPM1-208ENST00000404484 GNGT2O14610 69 aa19.58■□□□□ 0.73
TPM1-208ENST00000404484 DYRK3O43781 588 aa19.58■□□□□ 0.73
TPM1-208ENST00000404484 PRSS23O95084 383 aa19.58■□□□□ 0.73
TPM1-208ENST00000404484 ALOX5P09917 674 aa19.58■□□□□ 0.73
TPM1-208ENST00000404484 MAOAP21397 527 aa19.58■□□□□ 0.73
TPM1-208ENST00000404484 CCKBRP32239 447 aa19.58■□□□□ 0.73
TPM1-208ENST00000404484 HSPA13P48723 471 aa19.58■□□□□ 0.73
TPM1-208ENST00000404484 SYPL1Q16563 259 aa19.58■□□□□ 0.73
TPM1-208ENST00000404484 GPAT3Q53EU6 434 aa19.58■□□□□ 0.73
TPM1-208ENST00000404484 CMPK2Q5EBM0 449 aa19.58■□□□□ 0.73
TPM1-208ENST00000404484 ZBTB49Q6ZSB9 765 aa19.58■□□□□ 0.73
TPM1-208ENST00000404484 VTCN1Q7Z7D3 282 aa19.58■□□□□ 0.73
TPM1-208ENST00000404484 GEMIN6Q8WXD5 167 aaKnown RBP19.58■□□□□ 0.73
TPM1-208ENST00000404484 CLIP3Q96DZ5 547 aa19.58■□□□□ 0.73
TPM1-208ENST00000404484 VPS50Q96JG6 964 aa19.58■□□□□ 0.73
TPM1-208ENST00000404484 STACQ99469 402 aa19.58■□□□□ 0.73
TPM1-208ENST00000404484 PIGUQ9H490 435 aa19.58■□□□□ 0.73
TPM1-208ENST00000404484 TRIM45Q9H8W5 580 aaPredicted RBP19.58■□□□□ 0.73
TPM1-208ENST00000404484 ANKRA2Q9H9E1 313 aa19.58■□□□□ 0.73
TPM1-208ENST00000404484 DUSP22Q9NRW4 184 aa19.58■□□□□ 0.73
TPM1-208ENST00000404484 ZNF639Q9UID6 485 aa19.58■□□□□ 0.73
TPM1-208ENST00000404484 ZMIZ1Q9ULJ6 1067 aa19.58■□□□□ 0.73
TPM1-208ENST00000404484 SATB2Q9UPW6 733 aa19.58■□□□□ 0.73
TPM1-208ENST00000404484 PMS2P1A4D2B8 440 aa19.57■□□□□ 0.72
TPM1-208ENST00000404484 AK1P00568 194 aa19.57■□□□□ 0.72
TPM1-208ENST00000404484 IFNA16P05015 189 aa19.57■□□□□ 0.72
TPM1-208ENST00000404484 CT62P0C5K7 136 aa19.57■□□□□ 0.72
TPM1-208ENST00000404484 KCNJ10P78508 379 aa19.57■□□□□ 0.72
TPM1-208ENST00000404484 MAPK11Q15759 364 aa19.57■□□□□ 0.72
TPM1-208ENST00000404484 MINDY4Q4G0A6 757 aa19.57■□□□□ 0.72
TPM1-208ENST00000404484 MFSD4BQ5TF39 518 aa19.57■□□□□ 0.72
TPM1-208ENST00000404484 PWWP2BQ6NUJ5 590 aa19.57■□□□□ 0.72
TPM1-208ENST00000404484 KBTBD2Q8IY47 623 aa19.57■□□□□ 0.72
TPM1-208ENST00000404484 SLC9A6Q92581 669 aa19.57■□□□□ 0.72
TPM1-208ENST00000404484 SDCCAG3Q96C92 435 aa19.57■□□□□ 0.72
TPM1-208ENST00000404484 BTBD9Q96Q07 612 aa19.57■□□□□ 0.72
TPM1-208ENST00000404484 CIB1Q99828 191 aa19.57■□□□□ 0.72
TPM1-208ENST00000404484 TGIF2Q9GZN2 237 aa19.57■□□□□ 0.72
TPM1-208ENST00000404484 POLR1BQ9H9Y6 1135 aa19.57■□□□□ 0.72
TPM1-208ENST00000404484 PADI2Q9Y2J8 665 aa19.57■□□□□ 0.72
TPM1-208ENST00000404484 CLDN16Q9Y5I7 305 aa19.57■□□□□ 0.72
TPM1-208ENST00000404484 GPC6Q9Y625 555 aaPredicted RBP19.57■□□□□ 0.72
TPM1-208ENST00000404484 CACNA1BQ00975 2339 aa19.57■□□□□ 0.72
TPM1-208ENST00000404484 SAC3D1A6NKF1 404 aa19.57■□□□□ 0.72
TPM1-208ENST00000404484 TMX2-CTNND1H3BSU7 103 aa19.57■□□□□ 0.72
TPM1-208ENST00000404484 POLR1CO15160 346 aaPredicted RBP19.57■□□□□ 0.72
TPM1-208ENST00000404484 PRAMEF2O60811 474 aa19.57■□□□□ 0.72
TPM1-208ENST00000404484 JRKO75564 520 aa19.57■□□□□ 0.72
TPM1-208ENST00000404484 OPN1SWP03999 348 aa19.57■□□□□ 0.72
TPM1-208ENST00000404484 ACADSP16219 412 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms