RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 STK38LQ9Y2H1 464 aa5.3□□□□□ -1.56
HMGB1P20-201ENST00000402555 PLLPQ9Y342 182 aa5.3□□□□□ -1.56
HMGB1P20-201ENST00000402555 NPFFR2Q9Y5X5 522 aa5.3□□□□□ -1.56
HMGB1P20-201ENST00000402555 CHCHD2Q9Y6H1 151 aaPredicted RBP5.3□□□□□ -1.56
HMGB1P20-201ENST00000402555 ZNF780BQ9Y6R6 833 aa5.3□□□□□ -1.56
HMGB1P20-201ENST00000402555 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.3□□□□□ -1.56
HMGB1P20-201ENST00000402555 ADGRG4Q8IZF6 3080 aa5.3□□□□□ -1.56
HMGB1P20-201ENST00000402555 FBN2P35556 2912 aa5.3□□□□□ -1.56
HMGB1P20-201ENST00000402555 TEP1Q99973 2627 aaKnown RBP5.29□□□□□ -1.56
HMGB1P20-201ENST00000402555 ANKHD1Q8IWZ3 2542 aaKnown RBP5.29□□□□□ -1.56
HMGB1P20-201ENST00000402555 C19orf84I3L1E1 186 aa5.29□□□□□ -1.56
HMGB1P20-201ENST00000402555 PRRG2O14669 202 aa5.29□□□□□ -1.56
HMGB1P20-201ENST00000402555 AZIN1O14977 448 aa5.29□□□□□ -1.56
HMGB1P20-201ENST00000402555 TRIM13O60858 407 aa5.29□□□□□ -1.56
HMGB1P20-201ENST00000402555 SEC22BO75396 215 aa5.29□□□□□ -1.56
HMGB1P20-201ENST00000402555 CHRNGP07510 517 aa5.29□□□□□ -1.56
HMGB1P20-201ENST00000402555 SNRPB2P08579 225 aaKnown RBP5.29□□□□□ -1.56
HMGB1P20-201ENST00000402555 LINC00032P0C843 101 aa5.29□□□□□ -1.56
HMGB1P20-201ENST00000402555 UROSP10746 265 aa5.29□□□□□ -1.56
HMGB1P20-201ENST00000402555 DRD2P14416 443 aa5.29□□□□□ -1.56
HMGB1P20-201ENST00000402555 TACR1P25103 407 aa5.29□□□□□ -1.56
HMGB1P20-201ENST00000402555 ABCD3P28288 659 aa5.29□□□□□ -1.56
HMGB1P20-201ENST00000402555 ARRB2P32121 409 aa5.29□□□□□ -1.56
HMGB1P20-201ENST00000402555 TRPC1P48995 793 aa5.29□□□□□ -1.56
HMGB1P20-201ENST00000402555 EMDP50402 254 aa5.29□□□□□ -1.56
HMGB1P20-201ENST00000402555 CORO7P57737 925 aa5.29□□□□□ -1.56
HMGB1P20-201ENST00000402555 MAP4K2Q12851 820 aa5.29□□□□□ -1.56
HMGB1P20-201ENST00000402555 DOC2BQ14184 412 aa5.29□□□□□ -1.56
HMGB1P20-201ENST00000402555 RPS6KA2Q15349 733 aa5.29□□□□□ -1.56
HMGB1P20-201ENST00000402555 NTRK2Q16620 822 aa5.29□□□□□ -1.56
HMGB1P20-201ENST00000402555 ZNF628Q5EBL2 1059 aa5.29□□□□□ -1.56
HMGB1P20-201ENST00000402555 SP5Q6BEB4 398 aaPredicted RBP5.29□□□□□ -1.56
HMGB1P20-201ENST00000402555 FAM71E1Q6IPT2 247 aa5.29□□□□□ -1.56
HMGB1P20-201ENST00000402555 ANKRD26P1Q6NSI1 321 aa5.29□□□□□ -1.56
HMGB1P20-201ENST00000402555 WDR93Q6P2C0 686 aa5.29□□□□□ -1.56
HMGB1P20-201ENST00000402555 ARHGAP11AQ6P4F7 1023 aa5.29□□□□□ -1.56
HMGB1P20-201ENST00000402555 GALNT18Q6P9A2 607 aa5.29□□□□□ -1.56
HMGB1P20-201ENST00000402555 EMBQ6PCB8 327 aa5.29□□□□□ -1.56
HMGB1P20-201ENST00000402555 RPTNQ6XPR3 784 aa5.29□□□□□ -1.56
HMGB1P20-201ENST00000402555 BNC2Q6ZN30 1099 aaPredicted RBP5.29□□□□□ -1.56
HMGB1P20-201ENST00000402555 TRILQ7L0X0 811 aa5.29□□□□□ -1.56
HMGB1P20-201ENST00000402555 SLC22A16Q86VW1 577 aa5.29□□□□□ -1.56
HMGB1P20-201ENST00000402555 TICAM1Q8IUC6 712 aa5.29□□□□□ -1.56
HMGB1P20-201ENST00000402555 ALDH16A1Q8IZ83 802 aa5.29□□□□□ -1.56
HMGB1P20-201ENST00000402555 TAGAPQ8N103 731 aa5.29□□□□□ -1.56
HMGB1P20-201ENST00000402555 RIBC1Q8N443 379 aaPredicted RBP5.29□□□□□ -1.56
HMGB1P20-201ENST00000402555 FAM109AQ8N4B1 249 aa5.29□□□□□ -1.56
HMGB1P20-201ENST00000402555 ZNF808Q8N4W9 903 aaPredicted RBP5.29□□□□□ -1.56
HMGB1P20-201ENST00000402555 OR7G2Q8NG99 324 aa5.29□□□□□ -1.56
HMGB1P20-201ENST00000402555 OR7G1Q8NGA0 311 aa5.29□□□□□ -1.56
HMGB1P20-201ENST00000402555 OR2T11Q8NH01 316 aa5.29□□□□□ -1.56
HMGB1P20-201ENST00000402555 CLHC1Q8NHS4 586 aa5.29□□□□□ -1.56
HMGB1P20-201ENST00000402555 SPPL2AQ8TCT8 520 aa5.29□□□□□ -1.56
HMGB1P20-201ENST00000402555 AGR3Q8TD06 166 aa5.29□□□□□ -1.56
HMGB1P20-201ENST00000402555 TCP10LQ8TDR4 215 aa5.29□□□□□ -1.56
HMGB1P20-201ENST00000402555 CAVIN3Q969G5 261 aa5.29□□□□□ -1.56
HMGB1P20-201ENST00000402555 GFM2Q969S9 779 aaKnown RBP5.29□□□□□ -1.56
HMGB1P20-201ENST00000402555 SDCCAG3Q96C92 435 aa5.29□□□□□ -1.56
HMGB1P20-201ENST00000402555 CTHRC1Q96CG8 243 aa5.29□□□□□ -1.56
HMGB1P20-201ENST00000402555 EGLN2Q96KS0 407 aa5.29□□□□□ -1.56
HMGB1P20-201ENST00000402555 RILPQ96NA2 401 aa5.29□□□□□ -1.56
HMGB1P20-201ENST00000402555 BBS4Q96RK4 519 aa5.29□□□□□ -1.56
HMGB1P20-201ENST00000402555 NODALQ96S42 347 aa5.29□□□□□ -1.56
HMGB1P20-201ENST00000402555 DMRTA2Q96SC8 542 aa5.29□□□□□ -1.56
HMGB1P20-201ENST00000402555 DOHHQ9BU89 302 aa5.29□□□□□ -1.56
HMGB1P20-201ENST00000402555 PARD6BQ9BYG5 372 aa5.29□□□□□ -1.56
HMGB1P20-201ENST00000402555 SLC6A15Q9H2J7 730 aa5.29□□□□□ -1.56
HMGB1P20-201ENST00000402555 TUBB1Q9H4B7 451 aa5.29□□□□□ -1.56
HMGB1P20-201ENST00000402555 LDAHQ9H6V9 325 aa5.29□□□□□ -1.56
HMGB1P20-201ENST00000402555 EXO5Q9H790 373 aa5.29□□□□□ -1.56
HMGB1P20-201ENST00000402555 ZNF703Q9H7S9 590 aaPredicted RBP5.29□□□□□ -1.56
HMGB1P20-201ENST00000402555 ZDHHC11Q9H8X9 412 aa5.29□□□□□ -1.56
HMGB1P20-201ENST00000402555 RRAGDQ9NQL2 400 aaPredicted RBP5.29□□□□□ -1.56
HMGB1P20-201ENST00000402555 SLC35C2Q9NQQ7 365 aa5.29□□□□□ -1.56
HMGB1P20-201ENST00000402555 PNPLA3Q9NST1 481 aa5.29□□□□□ -1.56
HMGB1P20-201ENST00000402555 MKS1Q9NXB0 559 aa5.29□□□□□ -1.56
HMGB1P20-201ENST00000402555 CNIH4Q9P003 139 aa5.29□□□□□ -1.56
HMGB1P20-201ENST00000402555 SPRR3Q9UBC9 169 aa5.29□□□□□ -1.56
HMGB1P20-201ENST00000402555 ZNF639Q9UID6 485 aa5.29□□□□□ -1.56
HMGB1P20-201ENST00000402555 MID2Q9UJV3 735 aa5.29□□□□□ -1.56
HMGB1P20-201ENST00000402555 PSME2Q9UL46 239 aa5.29□□□□□ -1.56
HMGB1P20-201ENST00000402555 EXO1Q9UQ84 846 aaKnown RBP5.29□□□□□ -1.56
HMGB1P20-201ENST00000402555 ENTPD4Q9Y227 616 aa5.29□□□□□ -1.56
HMGB1P20-201ENST00000402555 CCL27Q9Y4X3 112 aa5.29□□□□□ -1.56
HMGB1P20-201ENST00000402555 AKAP6Q13023 2319 aa5.29□□□□□ -1.56
HMGB1P20-201ENST00000402555 PHF3Q92576 2039 aaKnown RBP5.28□□□□□ -1.56
HMGB1P20-201ENST00000402555 TRGV5A0A0B4J1U4 118 aa5.28□□□□□ -1.56
HMGB1P20-201ENST00000402555 WDR91A4D1P6 747 aa5.28□□□□□ -1.56
HMGB1P20-201ENST00000402555 C17orf51A8MQB3 221 aa5.28□□□□□ -1.56
HMGB1P20-201ENST00000402555 MYO1GB0I1T2 1018 aa5.28□□□□□ -1.56
HMGB1P20-201ENST00000402555 E9PLN8 166 aa5.28□□□□□ -1.56
HMGB1P20-201ENST00000402555 TP53I11O14683 189 aa5.28□□□□□ -1.56
HMGB1P20-201ENST00000402555 PIP5K1BO14986 540 aa5.28□□□□□ -1.56
HMGB1P20-201ENST00000402555 AKAP10O43572 662 aa5.28□□□□□ -1.56
HMGB1P20-201ENST00000402555 TRIM3O75382 744 aaPredicted RBP5.28□□□□□ -1.56
HMGB1P20-201ENST00000402555 PPM1BO75688 479 aa5.28□□□□□ -1.56
HMGB1P20-201ENST00000402555 RSL1D1O76021 490 aaKnown RBP5.28□□□□□ -1.56
HMGB1P20-201ENST00000402555 IGHG3P01860 377 aa5.28□□□□□ -1.56
HMGB1P20-201ENST00000402555 JUNP05412 331 aaKnown RBP5.28□□□□□ -1.56
HMGB1P20-201ENST00000402555 ABCB1P08183 1280 aaPredicted RBP5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms