RNA–Protein interactions for RNA: ENST00000402434.6

RTN4-207, Transcript of reticulon 4, humanhuman

TSL 5 BASIC

Gene RTN4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-207ENST00000402434 GFRALQ6UXV0 394 aa17.66■□□□□ 0.42
RTN4-207ENST00000402434 BNC2Q6ZN30 1099 aaPredicted RBP17.66■□□□□ 0.42
RTN4-207ENST00000402434 FAM47EQ6ZV65 393 aa17.66■□□□□ 0.42
RTN4-207ENST00000402434 NATD1Q8N6N6 113 aa17.66■□□□□ 0.42
RTN4-207ENST00000402434 PIWIL2Q8TC59 973 aaKnown RBP17.66■□□□□ 0.42
RTN4-207ENST00000402434 FOLH1BQ9HBA9 442 aa17.66■□□□□ 0.42
RTN4-207ENST00000402434 ATAD3AQ9NVI7 634 aa17.66■□□□□ 0.42
RTN4-207ENST00000402434 DDX18Q9NVP1 670 aaKnown RBP17.66■□□□□ 0.42
RTN4-207ENST00000402434 ZNF446Q9NWS9 450 aa17.66■□□□□ 0.42
RTN4-207ENST00000402434 MARCOQ9UEW3 520 aaPredicted RBP17.66■□□□□ 0.42
RTN4-207ENST00000402434 CNOT11Q9UKZ1 510 aaKnown RBP17.66■□□□□ 0.42
RTN4-207ENST00000402434 NPIPA1Q9UND3 350 aa17.66■□□□□ 0.42
RTN4-207ENST00000402434 NINQ8N4C6 2090 aa17.66■□□□□ 0.42
RTN4-207ENST00000402434 TRPC5OSA6NMA1 111 aa17.65■□□□□ 0.42
RTN4-207ENST00000402434 G3V3Y1 287 aa17.65■□□□□ 0.42
RTN4-207ENST00000402434 PPM1BO75688 479 aa17.65■□□□□ 0.42
RTN4-207ENST00000402434 GLSO94925 669 aaPredicted RBP17.65■□□□□ 0.42
RTN4-207ENST00000402434 PIGAP37287 484 aa17.65■□□□□ 0.42
RTN4-207ENST00000402434 RFC3P40938 356 aa17.65■□□□□ 0.42
RTN4-207ENST00000402434 CORO7P57737 925 aa17.65■□□□□ 0.42
RTN4-207ENST00000402434 KCNK10P57789 538 aa17.65■□□□□ 0.42
RTN4-207ENST00000402434 PPP2R2AP63151 447 aa17.65■□□□□ 0.42
RTN4-207ENST00000402434 PSG6Q00889 435 aa17.65■□□□□ 0.42
RTN4-207ENST00000402434 HSPB3Q12988 150 aa17.65■□□□□ 0.42
RTN4-207ENST00000402434 HYAL4Q2M3T9 481 aa17.65■□□□□ 0.42
RTN4-207ENST00000402434 CPTPQ5TA50 214 aa17.65■□□□□ 0.42
RTN4-207ENST00000402434 RGS9BPQ6ZS82 235 aa17.65■□□□□ 0.42
RTN4-207ENST00000402434 CAMKMTQ7Z624 323 aa17.65■□□□□ 0.42
RTN4-207ENST00000402434 PRR22Q8IZ63 422 aa17.65■□□□□ 0.42
RTN4-207ENST00000402434 FAM26EQ8N5C1 309 aa17.65■□□□□ 0.42
RTN4-207ENST00000402434 OR5M3Q8NGP4 307 aa17.65■□□□□ 0.42
RTN4-207ENST00000402434 SPPL2AQ8TCT8 520 aa17.65■□□□□ 0.42
RTN4-207ENST00000402434 NUDT8Q8WV74 236 aa17.65■□□□□ 0.42
RTN4-207ENST00000402434 NTNG2Q96CW9 530 aa17.65■□□□□ 0.42
RTN4-207ENST00000402434 PRPF18Q99633 342 aaKnown RBP17.65■□□□□ 0.42
RTN4-207ENST00000402434 TSPAN10Q9H1Z9 355 aaPredicted RBP17.65■□□□□ 0.42
RTN4-207ENST00000402434 MAPRE3Q9UPY8 281 aa17.65■□□□□ 0.42
RTN4-207ENST00000402434 ANKRD28O15084 1053 aa17.64■□□□□ 0.41
RTN4-207ENST00000402434 STSP08842 583 aa17.64■□□□□ 0.41
RTN4-207ENST00000402434 KITP10721 976 aa17.64■□□□□ 0.41
RTN4-207ENST00000402434 DNASE1L1P49184 302 aa17.64■□□□□ 0.41
RTN4-207ENST00000402434 TBCELQ5QJ74 424 aa17.64■□□□□ 0.41
RTN4-207ENST00000402434 NPSR1Q6W5P4 371 aa17.64■□□□□ 0.41
RTN4-207ENST00000402434 SLC34A3Q8N130 599 aa17.64■□□□□ 0.41
RTN4-207ENST00000402434 HOXB13Q92826 284 aaPredicted RBP17.64■□□□□ 0.41
RTN4-207ENST00000402434 OMA1Q96E52 524 aa17.64■□□□□ 0.41
RTN4-207ENST00000402434 C7orf26Q96N11 449 aa17.64■□□□□ 0.41
RTN4-207ENST00000402434 TTTY12Q9BZ98 90 aa17.64■□□□□ 0.41
RTN4-207ENST00000402434 IL1RL2Q9HB29 575 aa17.64■□□□□ 0.41
RTN4-207ENST00000402434 EXPH5Q8NEV8 1989 aa17.64■□□□□ 0.41
RTN4-207ENST00000402434 NUP214P35658 2090 aaPredicted RBP17.64■□□□□ 0.41
RTN4-207ENST00000402434 ZNF195O14628 629 aa17.63■□□□□ 0.41
RTN4-207ENST00000402434 TFECO14948 347 aaPredicted RBP17.63■□□□□ 0.41
RTN4-207ENST00000402434 HS6ST1O60243 411 aa17.63■□□□□ 0.41
RTN4-207ENST00000402434 EPHA3P29320 983 aa17.63■□□□□ 0.41
RTN4-207ENST00000402434 GPC1P35052 558 aa17.63■□□□□ 0.41
RTN4-207ENST00000402434 CDK9P50750 372 aaKnown RBP17.63■□□□□ 0.41
RTN4-207ENST00000402434 PPIAP62937 165 aaKnown RBP17.63■□□□□ 0.41
RTN4-207ENST00000402434 PLCXD2Q0VAA5 305 aa17.63■□□□□ 0.41
RTN4-207ENST00000402434 GTF3C1Q12789 2109 aa17.63■□□□□ 0.41
RTN4-207ENST00000402434 UBAP2LQ14157 1087 aaKnown RBP17.63■□□□□ 0.41
RTN4-207ENST00000402434 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.63■□□□□ 0.415e-18■□□□□ 10.6
RTN4-207ENST00000402434 CMPK2Q5EBM0 449 aa17.63■□□□□ 0.41
RTN4-207ENST00000402434 PRAMEF20Q5VT98 475 aa17.63■□□□□ 0.41
RTN4-207ENST00000402434 TMEM81Q6P7N7 255 aa17.63■□□□□ 0.41
RTN4-207ENST00000402434 NUP54Q7Z3B4 507 aa17.63■□□□□ 0.41
RTN4-207ENST00000402434 PSMA8Q8TAA3 256 aa17.63■□□□□ 0.41
RTN4-207ENST00000402434 DIO2Q92813 273 aa17.63■□□□□ 0.41
RTN4-207ENST00000402434 HGDQ93099 445 aa17.63■□□□□ 0.41
RTN4-207ENST00000402434 MAGED4Q96JG8 741 aa17.63■□□□□ 0.41
RTN4-207ENST00000402434 MAELQ96JY0 434 aaKnown RBP17.63■□□□□ 0.41
RTN4-207ENST00000402434 ANGPTL4Q9BY76 406 aa17.63■□□□□ 0.41
RTN4-207ENST00000402434 BHLHE41Q9C0J9 482 aaPredicted RBP17.63■□□□□ 0.41
RTN4-207ENST00000402434 WDR55Q9H6Y2 383 aaPredicted RBP17.63■□□□□ 0.41
RTN4-207ENST00000402434 ZDHHC11Q9H8X9 412 aa17.63■□□□□ 0.41
RTN4-207ENST00000402434 PLSCR2Q9NRY7 297 aa17.63■□□□□ 0.41
RTN4-207ENST00000402434 SIRT3Q9NTG7 399 aaPredicted RBP17.63■□□□□ 0.41
RTN4-207ENST00000402434 TUBA8Q9NY65 449 aaPredicted RBP17.63■□□□□ 0.41
RTN4-207ENST00000402434 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.63■□□□□ 0.41
RTN4-207ENST00000402434 A0A1W2PRB8 838 aa17.63■□□□□ 0.41
RTN4-207ENST00000402434 OR6C70A6NIJ9 312 aa17.63■□□□□ 0.41
RTN4-207ENST00000402434 EFNA1P20827 205 aaPredicted RBP17.63■□□□□ 0.41
RTN4-207ENST00000402434 MAP3K8P41279 467 aa17.63■□□□□ 0.41
RTN4-207ENST00000402434 CASP3P42574 277 aa17.63■□□□□ 0.41
RTN4-207ENST00000402434 RPP38P78345 283 aaKnown RBP17.63■□□□□ 0.41
RTN4-207ENST00000402434 MAVSQ7Z434 540 aa17.63■□□□□ 0.41
RTN4-207ENST00000402434 SPATA19Q7Z5L4 167 aa17.63■□□□□ 0.41
RTN4-207ENST00000402434 SLC22A16Q86VW1 577 aa17.63■□□□□ 0.41
RTN4-207ENST00000402434 SLC44A2Q8IWA5 706 aaPredicted RBP17.63■□□□□ 0.41
RTN4-207ENST00000402434 CHERPQ8IWX8 916 aaKnown RBP17.63■□□□□ 0.41
RTN4-207ENST00000402434 GHDCQ8N2G8 530 aa17.63■□□□□ 0.41
RTN4-207ENST00000402434 CEP70Q8NHQ1 597 aa17.63■□□□□ 0.41
RTN4-207ENST00000402434 LRRC8CQ8TDW0 803 aa17.63■□□□□ 0.41
RTN4-207ENST00000402434 TMBIM1Q969X1 311 aa17.63■□□□□ 0.41
RTN4-207ENST00000402434 SLC35A4Q96G79 324 aa17.63■□□□□ 0.41
RTN4-207ENST00000402434 LMF2Q9BU23 707 aaKnown RBP17.63■□□□□ 0.41
RTN4-207ENST00000402434 ACBD3Q9H3P7 528 aa17.63■□□□□ 0.41
RTN4-207ENST00000402434 INTS9Q9NV88 658 aaKnown RBP17.63■□□□□ 0.41
RTN4-207ENST00000402434 OSGIN2Q9Y236 505 aa17.63■□□□□ 0.41
RTN4-207ENST00000402434 DNAJC13O75165 2243 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms