RNA–Protein interactions for RNA: ENST00000401642.7

SCFD2-202, Transcript of sec1 family domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD2, Length 3,176 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-202ENST00000401642 TMEM80Q96HE8 168 aa10.45□□□□□ -0.74
SCFD2-202ENST00000401642 QRFPRQ96P65 431 aa10.45□□□□□ -0.74
SCFD2-202ENST00000401642 TMED9Q9BVK6 235 aa10.45□□□□□ -0.74
SCFD2-202ENST00000401642 RBCK1Q9BYM8 510 aa10.45□□□□□ -0.74
SCFD2-202ENST00000401642 EPHX3Q9H6B9 360 aa10.45□□□□□ -0.74
SCFD2-202ENST00000401642 REV1Q9UBZ9 1251 aa10.45□□□□□ -0.74
SCFD2-202ENST00000401642 ZFR2Q9UPR6 939 aaKnown RBP10.45□□□□□ -0.74
SCFD2-202ENST00000401642 ZC3H12DA2A288 527 aaKnown RBP10.44□□□□□ -0.74
SCFD2-202ENST00000401642 POM121BA6NF01 834 aa10.44□□□□□ -0.74
SCFD2-202ENST00000401642 FAM170BA6NMN3 283 aa10.44□□□□□ -0.74
SCFD2-202ENST00000401642 GNB5O14775 395 aa10.44□□□□□ -0.74
SCFD2-202ENST00000401642 SLC2A10O95528 541 aa10.44□□□□□ -0.74
SCFD2-202ENST00000401642 SOX18P35713 384 aa10.44□□□□□ -0.74
SCFD2-202ENST00000401642 RUNX1T1Q06455 604 aa10.44□□□□□ -0.74
SCFD2-202ENST00000401642 HNRNPA0Q13151 305 aaKnown RBP10.44□□□□□ -0.74
SCFD2-202ENST00000401642 CRTC2Q53ET0 693 aaPredicted RBP10.44□□□□□ -0.74
SCFD2-202ENST00000401642 AGBL4Q5VU57 503 aa10.44□□□□□ -0.74
SCFD2-202ENST00000401642 RSBN1Q5VWQ0 802 aaPredicted RBP10.44□□□□□ -0.74
SCFD2-202ENST00000401642 ZNF770Q6IQ21 691 aaPredicted RBP10.44□□□□□ -0.74
SCFD2-202ENST00000401642 ENPP7Q6UWV6 458 aa10.44□□□□□ -0.74
SCFD2-202ENST00000401642 HSDL2Q6YN16 418 aa10.44□□□□□ -0.74
SCFD2-202ENST00000401642 PRR23CQ6ZRP0 262 aa10.44□□□□□ -0.74
SCFD2-202ENST00000401642 FAM92BQ6ZTR7 304 aa10.44□□□□□ -0.74
SCFD2-202ENST00000401642 WDR34Q96EX3 536 aa10.44□□□□□ -0.74
SCFD2-202ENST00000401642 SLC6A18Q96N87 628 aa10.44□□□□□ -0.74
SCFD2-202ENST00000401642 TRNT1Q96Q11 434 aaKnown RBP10.44□□□□□ -0.74
SCFD2-202ENST00000401642 ADAP2Q9NPF8 381 aa10.44□□□□□ -0.74
SCFD2-202ENST00000401642 PHPT1Q9NRX4 125 aaPredicted RBP10.44□□□□□ -0.74
SCFD2-202ENST00000401642 COMMD3Q9UBI1 195 aa10.44□□□□□ -0.74
SCFD2-202ENST00000401642 MUTYHQ9UIF7 546 aa10.44□□□□□ -0.74
SCFD2-202ENST00000401642 A4GNTQ9UNA3 340 aa10.44□□□□□ -0.74
SCFD2-202ENST00000401642 SLC27A6Q9Y2P4 619 aa10.44□□□□□ -0.74
SCFD2-202ENST00000401642 A0A1B0GVC2 190 aa10.44□□□□□ -0.74
SCFD2-202ENST00000401642 A6NIN4 97 aa10.44□□□□□ -0.74
SCFD2-202ENST00000401642 HNRNPA1P09651 372 aaKnown RBP eCLIP10.44□□□□□ -0.74
SCFD2-202ENST00000401642 PVRP15151 417 aa10.44□□□□□ -0.74
SCFD2-202ENST00000401642 PRKACBP22694 351 aa10.44□□□□□ -0.74
SCFD2-202ENST00000401642 RAB28P51157 221 aa10.44□□□□□ -0.74
SCFD2-202ENST00000401642 TUBA1BP68363 451 aa10.44□□□□□ -0.74
SCFD2-202ENST00000401642 DPTQ07507 201 aa10.44□□□□□ -0.74
SCFD2-202ENST00000401642 ARMC4Q5T2S8 1044 aa10.44□□□□□ -0.74
SCFD2-202ENST00000401642 MLIPQ5VWP3 458 aa10.44□□□□□ -0.74
SCFD2-202ENST00000401642 TUBA1AQ71U36 451 aa10.44□□□□□ -0.74
SCFD2-202ENST00000401642 MTSS1LQ765P7 747 aa10.44□□□□□ -0.74
SCFD2-202ENST00000401642 GDPD3Q7L5L3 318 aa10.44□□□□□ -0.74
SCFD2-202ENST00000401642 PRICKLE2Q7Z3G6 844 aa10.44□□□□□ -0.74
SCFD2-202ENST00000401642 OR4F15Q8NGB8 312 aa10.44□□□□□ -0.74
SCFD2-202ENST00000401642 PATE1Q8WXA2 126 aa10.44□□□□□ -0.74
SCFD2-202ENST00000401642 MTERF3Q96E29 417 aa10.44□□□□□ -0.74
SCFD2-202ENST00000401642 FAM83CQ9BQN1 747 aa10.44□□□□□ -0.74
SCFD2-202ENST00000401642 HDHD5Q9BXW7 423 aa10.44□□□□□ -0.74
SCFD2-202ENST00000401642 PRRG3Q9BZD7 231 aa10.44□□□□□ -0.74
SCFD2-202ENST00000401642 BARHL1Q9BZE3 327 aa10.44□□□□□ -0.74
SCFD2-202ENST00000401642 STARD5Q9NSY2 213 aa10.44□□□□□ -0.74
SCFD2-202ENST00000401642 NFKBIL1Q9UBC1 381 aaPredicted RBP10.44□□□□□ -0.74
SCFD2-202ENST00000401642 KLHL3Q9UH77 587 aa10.44□□□□□ -0.74
SCFD2-202ENST00000401642 CSNK1G3Q9Y6M4 447 aa10.44□□□□□ -0.74
SCFD2-202ENST00000401642 CFAP54Q96N23 3096 aa10.44□□□□□ -0.74
SCFD2-202ENST00000401642 SEC16AO15027 2179 aa10.44□□□□□ -0.74
SCFD2-202ENST00000401642 MTCL1Q9Y4B5 1905 aaKnown RBP10.43□□□□□ -0.74
SCFD2-202ENST00000401642 TNFRSF10AO00220 468 aa10.43□□□□□ -0.74
SCFD2-202ENST00000401642 PIP5K1CO60331 668 aa10.43□□□□□ -0.74
SCFD2-202ENST00000401642 GUCY1B2O75343 617 aa10.43□□□□□ -0.74
SCFD2-202ENST00000401642 PDE9AO76083 593 aa10.43□□□□□ -0.74
SCFD2-202ENST00000401642 ADAP00813 363 aa10.43□□□□□ -0.74
SCFD2-202ENST00000401642 GKN3PP0CG01 181 aa10.43□□□□□ -0.74
SCFD2-202ENST00000401642 GNSP15586 552 aa10.43□□□□□ -0.74
SCFD2-202ENST00000401642 PCBP4P57723 403 aaKnown RBP10.43□□□□□ -0.74
SCFD2-202ENST00000401642 ZNF791Q3KP31 576 aaPredicted RBP10.43□□□□□ -0.74
SCFD2-202ENST00000401642 ATAD3BQ5T9A4 648 aa10.43□□□□□ -0.74
SCFD2-202ENST00000401642 FAM131AQ6UXB0 335 aa10.43□□□□□ -0.74
SCFD2-202ENST00000401642 IKBIPQ70UQ0 350 aa10.43□□□□□ -0.74
SCFD2-202ENST00000401642 AKAP14Q86UN6 197 aa10.43□□□□□ -0.74
SCFD2-202ENST00000401642 NKAIN4Q8IVV8 208 aa10.43□□□□□ -0.74
SCFD2-202ENST00000401642 GALNT12Q8IXK2 581 aa10.43□□□□□ -0.74
SCFD2-202ENST00000401642 FBXO15Q8NCQ5 510 aaPredicted RBP10.43□□□□□ -0.74
SCFD2-202ENST00000401642 NUP43Q8NFH3 380 aa10.43□□□□□ -0.74
SCFD2-202ENST00000401642 FAIM2Q9BWQ8 316 aa10.43□□□□□ -0.74
SCFD2-202ENST00000401642 MMP28Q9H239 520 aa10.43□□□□□ -0.74
SCFD2-202ENST00000401642 FGF22Q9HCT0 170 aa10.43□□□□□ -0.74
SCFD2-202ENST00000401642 SLC6A20Q9NP91 592 aa10.43□□□□□ -0.74
SCFD2-202ENST00000401642 PLCXD1Q9NUJ7 323 aa10.43□□□□□ -0.74
SCFD2-202ENST00000401642 LINC01565O15544 149 aa10.43□□□□□ -0.74
SCFD2-202ENST00000401642 RASGRP1O95267 797 aa10.43□□□□□ -0.74
SCFD2-202ENST00000401642 APOA1P02647 267 aa10.43□□□□□ -0.74
SCFD2-202ENST00000401642 CCNYL3P0C7X3 344 aa10.43□□□□□ -0.74
SCFD2-202ENST00000401642 MYL12AP19105 171 aa10.43□□□□□ -0.74
SCFD2-202ENST00000401642 SDHBP21912 280 aa10.43□□□□□ -0.74
SCFD2-202ENST00000401642 HIST1H1TP22492 207 aaPredicted RBP10.43□□□□□ -0.74
SCFD2-202ENST00000401642 LIMS1P48059 325 aa10.43□□□□□ -0.74
SCFD2-202ENST00000401642 GIPRP48546 466 aa10.43□□□□□ -0.74
SCFD2-202ENST00000401642 RGS8P57771 180 aaPredicted RBP10.43□□□□□ -0.74
SCFD2-202ENST00000401642 REEP5Q00765 189 aa10.43□□□□□ -0.74
SCFD2-202ENST00000401642 TGM3Q08188 693 aa10.43□□□□□ -0.74
SCFD2-202ENST00000401642 SELENBP1Q13228 472 aa10.43□□□□□ -0.74
SCFD2-202ENST00000401642 C1DQ13901 141 aaKnown RBP10.43□□□□□ -0.74
SCFD2-202ENST00000401642 ZNF367Q7RTV3 350 aa10.43□□□□□ -0.74
SCFD2-202ENST00000401642 NRARPQ7Z6K4 114 aa10.43□□□□□ -0.74
SCFD2-202ENST00000401642 SLC16A11Q8NCK7 471 aa10.43□□□□□ -0.74
SCFD2-202ENST00000401642 SLC30A2Q9BRI3 323 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms