RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best) BASIC

Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 RHCGQ9UBD6 479 aa15□□□□□ -0.01
CHRFAM7A-203ENST00000401522 NDOR1Q9UHB4 597 aa15□□□□□ -0.01
CHRFAM7A-203ENST00000401522 GMEB2Q9UKD1 530 aa15□□□□□ -0.01
CHRFAM7A-203ENST00000401522 TDRD6O60522 2096 aaKnown RBP14.99□□□□□ -0.01
CHRFAM7A-203ENST00000401522 MN1Q10571 1320 aaPredicted RBP14.99□□□□□ -0.01
CHRFAM7A-203ENST00000401522 TRBV4-1A0A0J9YWV2 114 aa14.99□□□□□ -0.01
CHRFAM7A-203ENST00000401522 PNMA8CA0A1B0GUJ8 204 aa14.99□□□□□ -0.01
CHRFAM7A-203ENST00000401522 PDZK1P1A8MUH7 402 aa14.99□□□□□ -0.01
CHRFAM7A-203ENST00000401522 CCRL2O00421 344 aa14.99□□□□□ -0.01
CHRFAM7A-203ENST00000401522 FFAR1O14842 300 aa14.99□□□□□ -0.01
CHRFAM7A-203ENST00000401522 SDC3O75056 442 aa14.99□□□□□ -0.01
CHRFAM7A-203ENST00000401522 MFN2O95140 757 aa14.99□□□□□ -0.01
CHRFAM7A-203ENST00000401522 EML2O95834 649 aa14.99□□□□□ -0.01
CHRFAM7A-203ENST00000401522 RPN2P04844 631 aa14.99□□□□□ -0.01
CHRFAM7A-203ENST00000401522 BCHEP06276 602 aa14.99□□□□□ -0.01
CHRFAM7A-203ENST00000401522 LIM2P55344 173 aa14.99□□□□□ -0.01
CHRFAM7A-203ENST00000401522 SMIM11AP58511 58 aa14.99□□□□□ -0.01
CHRFAM7A-203ENST00000401522 ILKQ13418 452 aa14.99□□□□□ -0.01
CHRFAM7A-203ENST00000401522 TSTQ16762 297 aaKnown RBP14.99□□□□□ -0.01
CHRFAM7A-203ENST00000401522 TMEM201Q5SNT2 666 aa14.99□□□□□ -0.01
CHRFAM7A-203ENST00000401522 ADGRF3Q8IZF5 1079 aa14.99□□□□□ -0.01
CHRFAM7A-203ENST00000401522 PARP16Q8N5Y8 322 aa14.99□□□□□ -0.01
CHRFAM7A-203ENST00000401522 WDR36Q8NI36 951 aaKnown RBP14.99□□□□□ -0.01
CHRFAM7A-203ENST00000401522 RASSF5Q8WWW0 418 aa14.99□□□□□ -0.01
CHRFAM7A-203ENST00000401522 TFGQ92734 400 aaPredicted RBP14.99□□□□□ -0.01
CHRFAM7A-203ENST00000401522 HPS1Q92902 700 aa14.99□□□□□ -0.01
CHRFAM7A-203ENST00000401522 TM4SF18Q96CE8 201 aa14.99□□□□□ -0.01
CHRFAM7A-203ENST00000401522 TMEM19Q96HH6 336 aa14.99□□□□□ -0.01
CHRFAM7A-203ENST00000401522 INSM2Q96T92 566 aaPredicted RBP14.99□□□□□ -0.01
CHRFAM7A-203ENST00000401522 ZNF717Q9BY31 904 aaPredicted RBP14.99□□□□□ -0.01
CHRFAM7A-203ENST00000401522 IL21RQ9HBE5 538 aa14.99□□□□□ -0.01
CHRFAM7A-203ENST00000401522 SLC25A19Q9HC21 320 aa14.99□□□□□ -0.01
CHRFAM7A-203ENST00000401522 ITGB1BP2Q9UKP3 347 aa14.99□□□□□ -0.01
CHRFAM7A-203ENST00000401522 FRYLO94915 3013 aa14.99□□□□□ -0.01
CHRFAM7A-203ENST00000401522 GPR179Q6PRD1 2367 aa14.98□□□□□ -0.01
CHRFAM7A-203ENST00000401522 SNX4O95219 450 aa14.98□□□□□ -0.01
CHRFAM7A-203ENST00000401522 FUT4P22083 530 aa14.98□□□□□ -0.01
CHRFAM7A-203ENST00000401522 POU1F1P28069 291 aa14.98□□□□□ -0.01
CHRFAM7A-203ENST00000401522 EPHA8P29322 1005 aaPredicted RBP14.98□□□□□ -0.01
CHRFAM7A-203ENST00000401522 BSGP35613 385 aa14.98□□□□□ -0.01
CHRFAM7A-203ENST00000401522 RHAGQ02094 409 aa14.98□□□□□ -0.01
CHRFAM7A-203ENST00000401522 MED22Q15528 200 aa14.98□□□□□ -0.01
CHRFAM7A-203ENST00000401522 RPS26P11Q5JNZ5 115 aaPredicted RBP14.98□□□□□ -0.01
CHRFAM7A-203ENST00000401522 SLX4IPQ5VYV7 408 aa14.98□□□□□ -0.01
CHRFAM7A-203ENST00000401522 TNFAIP8L2Q6P589 184 aaPredicted RBP14.98□□□□□ -0.01
CHRFAM7A-203ENST00000401522 KANSL1Q7Z3B3 1105 aa14.98□□□□□ -0.01
CHRFAM7A-203ENST00000401522 ATCAYQ86WG3 371 aa14.98□□□□□ -0.01
CHRFAM7A-203ENST00000401522 POC5Q8NA72 575 aa14.98□□□□□ -0.01
CHRFAM7A-203ENST00000401522 GPR32P1Q8NGA4 272 aa14.98□□□□□ -0.01
CHRFAM7A-203ENST00000401522 OR5AR1Q8NGP9 310 aa14.98□□□□□ -0.01
CHRFAM7A-203ENST00000401522 SAP25Q8TEE9 199 aa14.98□□□□□ -0.01
CHRFAM7A-203ENST00000401522 TEFMQ96QE5 360 aaKnown RBP14.98□□□□□ -0.01
CHRFAM7A-203ENST00000401522 OR5M11Q96RB7 305 aa14.98□□□□□ -0.01
CHRFAM7A-203ENST00000401522 PITHD1Q9GZP4 211 aaPredicted RBP14.98□□□□□ -0.01
CHRFAM7A-203ENST00000401522 PCBD2Q9H0N5 130 aa14.98□□□□□ -0.01
CHRFAM7A-203ENST00000401522 SLAMF7Q9NQ25 335 aa14.98□□□□□ -0.01
CHRFAM7A-203ENST00000401522 FAM86C1Q9NVL1 165 aa14.98□□□□□ -0.01
CHRFAM7A-203ENST00000401522 TAS2R16Q9NYV7 291 aa14.98□□□□□ -0.01
CHRFAM7A-203ENST00000401522 REV1Q9UBZ9 1251 aa14.98□□□□□ -0.01
CHRFAM7A-203ENST00000401522 MKLN1Q9UL63 735 aa14.98□□□□□ -0.01
CHRFAM7A-203ENST00000401522 PLAGL1Q9UM63 463 aa14.98□□□□□ -0.01
CHRFAM7A-203ENST00000401522 OR5K4A6NMS3 321 aa14.98□□□□□ -0.01
CHRFAM7A-203ENST00000401522 LOC110117498-PIK3R3F6TDL0 507 aa14.98□□□□□ -0.01
CHRFAM7A-203ENST00000401522 HAT1O14929 419 aa14.98□□□□□ -0.01
CHRFAM7A-203ENST00000401522 SH3BP5O60239 455 aa14.98□□□□□ -0.01
CHRFAM7A-203ENST00000401522 KIAA0513O60268 411 aa14.98□□□□□ -0.01
CHRFAM7A-203ENST00000401522 H1F0P07305 194 aaKnown RBP14.98□□□□□ -0.01
CHRFAM7A-203ENST00000401522 CSTF2P33240 577 aaKnown RBP eCLIP14.98□□□□□ -0.01
CHRFAM7A-203ENST00000401522 FRKP42685 505 aaPredicted RBP14.98□□□□□ -0.01
CHRFAM7A-203ENST00000401522 CCR8P51685 355 aa14.98□□□□□ -0.01
CHRFAM7A-203ENST00000401522 CRISP3P54108 245 aa14.98□□□□□ -0.01
CHRFAM7A-203ENST00000401522 RPS26P62854 115 aaKnown RBP14.98□□□□□ -0.01
CHRFAM7A-203ENST00000401522 SLC13A2Q13183 592 aa14.98□□□□□ -0.01
CHRFAM7A-203ENST00000401522 RPE65Q16518 533 aa14.98□□□□□ -0.01
CHRFAM7A-203ENST00000401522 SPDYE7PQ495Y7 208 aa14.98□□□□□ -0.01
CHRFAM7A-203ENST00000401522 SOWAHCQ53LP3 525 aaPredicted RBP14.98□□□□□ -0.01
CHRFAM7A-203ENST00000401522 DCST1Q5T197 706 aa14.98□□□□□ -0.01
CHRFAM7A-203ENST00000401522 TCEAL6Q6IPX3 200 aa14.98□□□□□ -0.01
CHRFAM7A-203ENST00000401522 C6orf120Q7Z4R8 191 aa14.98□□□□□ -0.01
CHRFAM7A-203ENST00000401522 NLGN4XQ8N0W4 816 aa14.98□□□□□ -0.01
CHRFAM7A-203ENST00000401522 SMPDL3AQ92484 453 aa14.98□□□□□ -0.01
CHRFAM7A-203ENST00000401522 PIK3R3Q92569 461 aa14.98□□□□□ -0.01
CHRFAM7A-203ENST00000401522 TCEAL3Q969E4 200 aa14.98□□□□□ -0.01
CHRFAM7A-203ENST00000401522 TRNT1Q96Q11 434 aaKnown RBP14.98□□□□□ -0.01
CHRFAM7A-203ENST00000401522 ZNF607Q96SK3 696 aa14.98□□□□□ -0.01
CHRFAM7A-203ENST00000401522 TAPBPLQ9BX59 468 aa14.98□□□□□ -0.01
CHRFAM7A-203ENST00000401522 ROGDIQ9GZN7 287 aa14.98□□□□□ -0.01
CHRFAM7A-203ENST00000401522 KLHL25Q9H0H3 589 aa14.98□□□□□ -0.01
CHRFAM7A-203ENST00000401522 RNF167Q9H6Y7 350 aa14.98□□□□□ -0.01
CHRFAM7A-203ENST00000401522 NT5DC2Q9H857 520 aa14.98□□□□□ -0.01
CHRFAM7A-203ENST00000401522 ADAMTS9Q9P2N4 1935 aa14.97□□□□□ -0.01
CHRFAM7A-203ENST00000401522 LNP1A1A4G5 178 aa14.97□□□□□ -0.01
CHRFAM7A-203ENST00000401522 LRP3O75074 770 aa14.97□□□□□ -0.01
CHRFAM7A-203ENST00000401522 ENTPD6O75354 484 aa14.97□□□□□ -0.01
CHRFAM7A-203ENST00000401522 TBX6O95947 436 aaPredicted RBP14.97□□□□□ -0.01
CHRFAM7A-203ENST00000401522 GIMD1P0DJR0 217 aa14.97□□□□□ -0.01
CHRFAM7A-203ENST00000401522 ELAVL4P26378 380 aaKnown RBP14.97□□□□□ -0.01
CHRFAM7A-203ENST00000401522 PCBP4P57723 403 aaKnown RBP14.97□□□□□ -0.01
CHRFAM7A-203ENST00000401522 REEP5Q00765 189 aa14.97□□□□□ -0.01
CHRFAM7A-203ENST00000401522 SPANXN2Q5MJ10 180 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms