RNA–Protein interactions for RNA: ENST00000398519.9

CSNK1D-204, Transcript of casein kinase 1 delta, humanhuman

TSL 5 BASIC

Gene CSNK1D, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-204ENST00000398519 PANX1Q96RD7 426 aa16.04■□□□□ 0.16
CSNK1D-204ENST00000398519 UTP23Q9BRU9 249 aaKnown RBP16.04■□□□□ 0.16
CSNK1D-204ENST00000398519 FRG2CA6NGY1 282 aa16.03■□□□□ 0.16
CSNK1D-204ENST00000398519 OR6B1O95007 311 aa16.03■□□□□ 0.16
CSNK1D-204ENST00000398519 TNFSF10P50591 281 aa16.03■□□□□ 0.16
CSNK1D-204ENST00000398519 TP53BP2Q13625 1128 aa16.03■□□□□ 0.16
CSNK1D-204ENST00000398519 MAPKAPK3Q16644 382 aa16.03■□□□□ 0.16
CSNK1D-204ENST00000398519 MFSD12Q6NUT3 480 aa16.03■□□□□ 0.16
CSNK1D-204ENST00000398519 SLC2A7Q6PXP3 512 aa16.03■□□□□ 0.16
CSNK1D-204ENST00000398519 LYPD8Q6UX82 237 aa16.03■□□□□ 0.16
CSNK1D-204ENST00000398519 SLC15A4Q8N697 577 aa16.03■□□□□ 0.16
CSNK1D-204ENST00000398519 OR56A1Q8NGH5 318 aa16.03■□□□□ 0.16
CSNK1D-204ENST00000398519 ASB15Q8WXK1 588 aa16.03■□□□□ 0.16
CSNK1D-204ENST00000398519 HOXB13Q92826 284 aaPredicted RBP16.03■□□□□ 0.16
CSNK1D-204ENST00000398519 MOAP1Q96BY2 351 aa16.03■□□□□ 0.16
CSNK1D-204ENST00000398519 SIGLEC12Q96PQ1 595 aa16.03■□□□□ 0.16
CSNK1D-204ENST00000398519 CCT8L2Q96SF2 557 aa16.03■□□□□ 0.16
CSNK1D-204ENST00000398519 LMF2Q9BU23 707 aaKnown RBP16.03■□□□□ 0.16
CSNK1D-204ENST00000398519 RMND5AQ9H871 391 aa16.03■□□□□ 0.16
CSNK1D-204ENST00000398519 TRIM45Q9H8W5 580 aaPredicted RBP16.03■□□□□ 0.16
CSNK1D-204ENST00000398519 MRGBPQ9NV56 204 aa16.03■□□□□ 0.16
CSNK1D-204ENST00000398519 GPATCH2Q9NW75 528 aa16.03■□□□□ 0.16
CSNK1D-204ENST00000398519 RNF103-CHMP3A0A140T963 221 aa16.02■□□□□ 0.16
CSNK1D-204ENST00000398519 CDK2AP1O14519 115 aa16.02■□□□□ 0.16
CSNK1D-204ENST00000398519 RFXANKO14593 260 aa16.02■□□□□ 0.16
CSNK1D-204ENST00000398519 ACOX3O15254 700 aa16.02■□□□□ 0.16
CSNK1D-204ENST00000398519 NEURL1O76050 574 aa16.02■□□□□ 0.16
CSNK1D-204ENST00000398519 HMGN2P05204 90 aaKnown RBP16.02■□□□□ 0.16
CSNK1D-204ENST00000398519 CASRP41180 1078 aa16.02■□□□□ 0.16
CSNK1D-204ENST00000398519 MAP3K8P41279 467 aa16.02■□□□□ 0.16
CSNK1D-204ENST00000398519 CYB561P49447 251 aa16.02■□□□□ 0.16
CSNK1D-204ENST00000398519 OC90Q02509 493 aaPredicted RBP16.02■□□□□ 0.16
CSNK1D-204ENST00000398519 KLF10Q13118 480 aa16.02■□□□□ 0.16
CSNK1D-204ENST00000398519 OR1C1Q15619 314 aa16.02■□□□□ 0.16
CSNK1D-204ENST00000398519 DNAJC14Q6Y2X3 702 aaPredicted RBP16.02■□□□□ 0.16
CSNK1D-204ENST00000398519 ZNF227Q86WZ6 799 aa16.02■□□□□ 0.16
CSNK1D-204ENST00000398519 PRR22Q8IZ63 422 aa16.02■□□□□ 0.16
CSNK1D-204ENST00000398519 TAGAPQ8N103 731 aa16.02■□□□□ 0.16
CSNK1D-204ENST00000398519 GTF2H4Q92759 462 aa16.02■□□□□ 0.16
CSNK1D-204ENST00000398519 C16orf58Q96GQ5 468 aa16.02■□□□□ 0.16
CSNK1D-204ENST00000398519 ITCHQ96J02 903 aa16.02■□□□□ 0.16
CSNK1D-204ENST00000398519 MFRPQ9BY79 579 aa16.02■□□□□ 0.16
CSNK1D-204ENST00000398519 SLC6A13Q9NSD5 602 aa16.02■□□□□ 0.16
CSNK1D-204ENST00000398519 LRFN1Q9P244 771 aa16.02■□□□□ 0.16
CSNK1D-204ENST00000398519 ARMCX1Q9P291 453 aa16.02■□□□□ 0.16
CSNK1D-204ENST00000398519 A0A1W2PP18 115 aa16.01■□□□□ 0.15
CSNK1D-204ENST00000398519 A8MVJ9 347 aa16.01■□□□□ 0.15
CSNK1D-204ENST00000398519 TO15178 435 aa16.01■□□□□ 0.15
CSNK1D-204ENST00000398519 FAM107AO95990 144 aa16.01■□□□□ 0.15
CSNK1D-204ENST00000398519 C1QCP02747 245 aa16.01■□□□□ 0.15
CSNK1D-204ENST00000398519 GSNP06396 782 aa16.01■□□□□ 0.15
CSNK1D-204ENST00000398519 UQCRC2P22695 453 aa16.01■□□□□ 0.15
CSNK1D-204ENST00000398519 ABCD3P28288 659 aa16.01■□□□□ 0.15
CSNK1D-204ENST00000398519 PTPN6P29350 595 aa16.01■□□□□ 0.15
CSNK1D-204ENST00000398519 LASP1Q14847 261 aaKnown RBP16.01■□□□□ 0.15
CSNK1D-204ENST00000398519 TLR1Q15399 786 aa16.01■□□□□ 0.15
CSNK1D-204ENST00000398519 ZNF791Q3KP31 576 aaPredicted RBP16.01■□□□□ 0.15
CSNK1D-204ENST00000398519 NADK2Q4G0N4 442 aa16.01■□□□□ 0.15
CSNK1D-204ENST00000398519 EXOSC6Q5RKV6 272 aaKnown RBP16.01■□□□□ 0.15
CSNK1D-204ENST00000398519 SPINK14Q6IE38 97 aa16.01■□□□□ 0.15
CSNK1D-204ENST00000398519 OPN5Q6U736 354 aa16.01■□□□□ 0.15
CSNK1D-204ENST00000398519 IL20RBQ6UXL0 311 aa16.01■□□□□ 0.15
CSNK1D-204ENST00000398519 Q6ZS92 163 aa16.01■□□□□ 0.15
CSNK1D-204ENST00000398519 MTDHQ86UE4 582 aaKnown RBP16.01■□□□□ 0.15
CSNK1D-204ENST00000398519 SLC44A2Q8IWA5 706 aaPredicted RBP16.01■□□□□ 0.15
CSNK1D-204ENST00000398519 CYP4Z2PQ8N1L4 340 aa16.01■□□□□ 0.15
CSNK1D-204ENST00000398519 CDRT4Q8N9R6 151 aa16.01■□□□□ 0.15
CSNK1D-204ENST00000398519 MDS2Q8NDY4 140 aa16.01■□□□□ 0.15
CSNK1D-204ENST00000398519 OR4N2Q8NGD1 307 aa16.01■□□□□ 0.15
CSNK1D-204ENST00000398519 FBXO30Q8TB52 745 aa16.01■□□□□ 0.15
CSNK1D-204ENST00000398519 SLC39A7Q92504 469 aa16.01■□□□□ 0.15
CSNK1D-204ENST00000398519 HSPBAP1Q96EW2 488 aa16.01■□□□□ 0.15
CSNK1D-204ENST00000398519 SLC35A5Q9BS91 424 aa16.01■□□□□ 0.15
CSNK1D-204ENST00000398519 YIPF4Q9BSR8 244 aa16.01■□□□□ 0.15
CSNK1D-204ENST00000398519 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.01■□□□□ 0.155e-10■■■■■ 31.1
CSNK1D-204ENST00000398519 HPF1Q9NWY4 346 aa16.01■□□□□ 0.15
CSNK1D-204ENST00000398519 VPS4AQ9UN37 437 aa16.01■□□□□ 0.15
CSNK1D-204ENST00000398519 NPFFR2Q9Y5X5 522 aa16.01■□□□□ 0.15
CSNK1D-204ENST00000398519 NUP214P35658 2090 aaPredicted RBP16.01■□□□□ 0.15
CSNK1D-204ENST00000398519 CCDC22O60826 627 aa16■□□□□ 0.15
CSNK1D-204ENST00000398519 FBXO45P0C2W1 286 aa16■□□□□ 0.15
CSNK1D-204ENST00000398519 ACP2P11117 423 aa16■□□□□ 0.15
CSNK1D-204ENST00000398519 NRG3P56975 720 aa16■□□□□ 0.15
CSNK1D-204ENST00000398519 ZNHIT3Q15649 155 aaPredicted RBP16■□□□□ 0.15
CSNK1D-204ENST00000398519 PAGE3Q5JUK9 113 aa16■□□□□ 0.15
CSNK1D-204ENST00000398519 C6orf10Q5SRN2 563 aa16■□□□□ 0.15
CSNK1D-204ENST00000398519 SLC6A19Q695T7 634 aa16■□□□□ 0.15
CSNK1D-204ENST00000398519 ZCCHC12Q6PEW1 402 aa16■□□□□ 0.15
CSNK1D-204ENST00000398519 BHLHB9Q6PI77 547 aa16■□□□□ 0.15
CSNK1D-204ENST00000398519 ZNF621Q6ZSS3 439 aa16■□□□□ 0.15
CSNK1D-204ENST00000398519 C6orf120Q7Z4R8 191 aa16■□□□□ 0.15
CSNK1D-204ENST00000398519 PTRH1Q86Y79 214 aaKnown RBP16■□□□□ 0.15
CSNK1D-204ENST00000398519 GPALPP1Q8IXQ4 340 aa16■□□□□ 0.15
CSNK1D-204ENST00000398519 SLC16A11Q8NCK7 471 aa16■□□□□ 0.15
CSNK1D-204ENST00000398519 SPACA9Q96E40 222 aaPredicted RBP16■□□□□ 0.15
CSNK1D-204ENST00000398519 OTUB1Q96FW1 271 aaPredicted RBP16■□□□□ 0.15
CSNK1D-204ENST00000398519 SERHL2Q9H4I8 314 aa16■□□□□ 0.15
CSNK1D-204ENST00000398519 RALYQ9UKM9 306 aaKnown RBP16■□□□□ 0.15
CSNK1D-204ENST00000398519 B3GNT3Q9Y2A9 372 aa16■□□□□ 0.15
CSNK1D-204ENST00000398519 NKX2-2O95096 273 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms