RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 CAPN14A8MX76 684 aa19.51■□□□□ 0.71
TSPAN4-206ENST00000397408 E9PBE3 544 aa19.51■□□□□ 0.71
TSPAN4-206ENST00000397408 G3V3Y1 287 aa19.51■□□□□ 0.71
TSPAN4-206ENST00000397408 TO15178 435 aa19.51■□□□□ 0.71
TSPAN4-206ENST00000397408 PEX1O43933 1283 aa19.51■□□□□ 0.71
TSPAN4-206ENST00000397408 EDF1O60869 148 aaKnown RBP19.51■□□□□ 0.71
TSPAN4-206ENST00000397408 CRYABP02511 175 aaKnown RBP19.51■□□□□ 0.71
TSPAN4-206ENST00000397408 KIR3DL1P43629 444 aa19.51■□□□□ 0.71
TSPAN4-206ENST00000397408 IDH3AP50213 366 aa19.51■□□□□ 0.71
TSPAN4-206ENST00000397408 MEOX1P50221 254 aa19.51■□□□□ 0.71
TSPAN4-206ENST00000397408 PRKAG1P54619 331 aa19.51■□□□□ 0.71
TSPAN4-206ENST00000397408 FBXW4P57775 412 aa19.51■□□□□ 0.71
TSPAN4-206ENST00000397408 SRSF11Q05519 484 aaKnown RBP19.51■□□□□ 0.71
TSPAN4-206ENST00000397408 RPS6KA2Q15349 733 aa19.51■□□□□ 0.71
TSPAN4-206ENST00000397408 SPANXN4Q5MJ08 99 aa19.51■□□□□ 0.71
TSPAN4-206ENST00000397408 CPSF7Q8N684 471 aaKnown RBP19.51■□□□□ 0.71
TSPAN4-206ENST00000397408 OMA1Q96E52 524 aa19.51■□□□□ 0.71
TSPAN4-206ENST00000397408 THOC1Q96FV9 657 aaKnown RBP19.51■□□□□ 0.71
TSPAN4-206ENST00000397408 C3orf14Q9HBI5 128 aa19.51■□□□□ 0.71
TSPAN4-206ENST00000397408 SH2D2AQ9NP31 389 aa19.51■□□□□ 0.71
TSPAN4-206ENST00000397408 SACM1LQ9NTJ5 587 aa19.51■□□□□ 0.71
TSPAN4-206ENST00000397408 SNX8Q9Y5X2 465 aa19.51■□□□□ 0.71
TSPAN4-206ENST00000397408 HELZ2Q9BYK8 2649 aaKnown RBP19.51■□□□□ 0.71
TSPAN4-206ENST00000397408 EXPH5Q8NEV8 1989 aa19.51■□□□□ 0.71
TSPAN4-206ENST00000397408 C9JVG2 144 aa19.51■□□□□ 0.71
TSPAN4-206ENST00000397408 KLRC4-KLRK1H3BQV0 150 aa19.51■□□□□ 0.71
TSPAN4-206ENST00000397408 UBDO15205 165 aa19.51■□□□□ 0.71
TSPAN4-206ENST00000397408 P04436 131 aa19.51■□□□□ 0.71
TSPAN4-206ENST00000397408 ABCB1P08183 1280 aaPredicted RBP19.51■□□□□ 0.71
TSPAN4-206ENST00000397408 CT45A8P0DMV1 189 aa19.51■□□□□ 0.71
TSPAN4-206ENST00000397408 CT45A9P0DMV2 189 aa19.51■□□□□ 0.71
TSPAN4-206ENST00000397408 DPY19L1Q2PZI1 675 aa19.51■□□□□ 0.71
TSPAN4-206ENST00000397408 FAM174BQ3ZCQ3 159 aa19.51■□□□□ 0.71
TSPAN4-206ENST00000397408 PDCD4Q53EL6 469 aaKnown RBP19.51■□□□□ 0.71
TSPAN4-206ENST00000397408 CT45A2Q5DJT8 189 aa19.51■□□□□ 0.71
TSPAN4-206ENST00000397408 WDR53Q7Z5U6 358 aaPredicted RBP19.51■□□□□ 0.71
TSPAN4-206ENST00000397408 ATCAYQ86WG3 371 aa19.51■□□□□ 0.71
TSPAN4-206ENST00000397408 SLC44A2Q8IWA5 706 aaPredicted RBP19.51■□□□□ 0.71
TSPAN4-206ENST00000397408 SLC34A3Q8N130 599 aa19.51■□□□□ 0.71
TSPAN4-206ENST00000397408 NUP43Q8NFH3 380 aa19.51■□□□□ 0.71
TSPAN4-206ENST00000397408 OR8J2Q8NGG1 315 aa19.51■□□□□ 0.71
TSPAN4-206ENST00000397408 DNAJB8Q8NHS0 232 aa19.51■□□□□ 0.71
TSPAN4-206ENST00000397408 PAQR8Q8TEZ7 354 aa19.51■□□□□ 0.71
TSPAN4-206ENST00000397408 NR4A3Q92570 626 aa19.51■□□□□ 0.71
TSPAN4-206ENST00000397408 FAM120BQ96EK7 910 aaKnown RBP19.51■□□□□ 0.71
TSPAN4-206ENST00000397408 MS4A4EQ96PG1 132 aa19.51■□□□□ 0.71
TSPAN4-206ENST00000397408 CXorf36Q9H7Y0 433 aa19.51■□□□□ 0.71
TSPAN4-206ENST00000397408 NEUROD4Q9HD90 331 aa19.51■□□□□ 0.71
TSPAN4-206ENST00000397408 ZCCHC3Q9NUD5 404 aaKnown RBP19.51■□□□□ 0.71
TSPAN4-206ENST00000397408 VPS4AQ9UN37 437 aa19.51■□□□□ 0.71
TSPAN4-206ENST00000397408 CHCHD2Q9Y6H1 151 aaPredicted RBP19.51■□□□□ 0.71
TSPAN4-206ENST00000397408 TP53I11O14683 189 aa19.5■□□□□ 0.71
TSPAN4-206ENST00000397408 CFLARO15519 480 aa19.5■□□□□ 0.71
TSPAN4-206ENST00000397408 EMC8O43402 210 aa19.5■□□□□ 0.71
TSPAN4-206ENST00000397408 PPM1BO75688 479 aa19.5■□□□□ 0.71
TSPAN4-206ENST00000397408 IL12AP29459 219 aa19.5■□□□□ 0.71
TSPAN4-206ENST00000397408 RFC3P40938 356 aa19.5■□□□□ 0.71
TSPAN4-206ENST00000397408 WNT3P56703 355 aa19.5■□□□□ 0.71
TSPAN4-206ENST00000397408 PRR5P85299 388 aa19.5■□□□□ 0.71
TSPAN4-206ENST00000397408 PSG6Q00889 435 aa19.5■□□□□ 0.71
TSPAN4-206ENST00000397408 GUCY1A3Q02108 690 aa19.5■□□□□ 0.71
TSPAN4-206ENST00000397408 GSTA3Q16772 222 aa19.5■□□□□ 0.71
TSPAN4-206ENST00000397408 PRAMEF20Q5VT98 475 aa19.5■□□□□ 0.71
TSPAN4-206ENST00000397408 SLC22A10Q63ZE4 541 aa19.5■□□□□ 0.71
TSPAN4-206ENST00000397408 ZNF324BQ6AW86 544 aaPredicted RBP19.5■□□□□ 0.71
TSPAN4-206ENST00000397408 CLECL1Q8IZS7 167 aa19.5■□□□□ 0.71
TSPAN4-206ENST00000397408 GALNT11Q8NCW6 608 aa19.5■□□□□ 0.71
TSPAN4-206ENST00000397408 TMBIM1Q969X1 311 aa19.5■□□□□ 0.71
TSPAN4-206ENST00000397408 ZBTB18Q99592 522 aa19.5■□□□□ 0.71
TSPAN4-206ENST00000397408 SLX1AQ9BQ83 275 aa19.5■□□□□ 0.71
TSPAN4-206ENST00000397408 NPHS2Q9NP85 383 aa19.5■□□□□ 0.71
TSPAN4-206ENST00000397408 NTMQ9P121 344 aa19.5■□□□□ 0.71
TSPAN4-206ENST00000397408 OR10H1Q9Y4A9 318 aa19.5■□□□□ 0.71
TSPAN4-206ENST00000397408 NUP214P35658 2090 aaPredicted RBP19.5■□□□□ 0.71
TSPAN4-206ENST00000397408 EML6Q6ZMW3 1958 aa19.49■□□□□ 0.71
TSPAN4-206ENST00000397408 RNASET2O00584 256 aaKnown RBP19.49■□□□□ 0.71
TSPAN4-206ENST00000397408 DYNC1I1O14576 645 aa19.49■□□□□ 0.71
TSPAN4-206ENST00000397408 ZNF24P17028 368 aa19.49■□□□□ 0.71
TSPAN4-206ENST00000397408 NAGAP17050 411 aa19.49■□□□□ 0.71
TSPAN4-206ENST00000397408 SOAT1P35610 550 aa19.49■□□□□ 0.71
TSPAN4-206ENST00000397408 HBA1P69905 142 aa19.49■□□□□ 0.71
TSPAN4-206ENST00000397408 ZNHIT3Q15649 155 aaPredicted RBP19.49■□□□□ 0.71
TSPAN4-206ENST00000397408 SPDYE7PQ495Y7 208 aa19.49■□□□□ 0.71
TSPAN4-206ENST00000397408 ANKRD46Q86W74 232 aa19.49■□□□□ 0.71
TSPAN4-206ENST00000397408 FBXW8Q8N3Y1 598 aa19.49■□□□□ 0.71
TSPAN4-206ENST00000397408 OR2M7Q8NG81 312 aa19.49■□□□□ 0.71
TSPAN4-206ENST00000397408 PSMA8Q8TAA3 256 aa19.49■□□□□ 0.71
TSPAN4-206ENST00000397408 LMF2Q9BU23 707 aaKnown RBP19.49■□□□□ 0.71
TSPAN4-206ENST00000397408 CCDC28BQ9BUN5 200 aa19.49■□□□□ 0.71
TSPAN4-206ENST00000397408 SDR39U1Q9NRG7 319 aaPredicted RBP19.49■□□□□ 0.71
TSPAN4-206ENST00000397408 MYO18BQ8IUG5 2567 aa19.48■□□□□ 0.71
TSPAN4-206ENST00000397408 GIMAP1-GIMAP5A0A087WTJ2 511 aa19.48■□□□□ 0.71
TSPAN4-206ENST00000397408 PINLYPA6NC86 204 aa19.48■□□□□ 0.71
TSPAN4-206ENST00000397408 CNR1P21554 472 aa19.48■□□□□ 0.71
TSPAN4-206ENST00000397408 MST1P26927 711 aa19.48■□□□□ 0.71
TSPAN4-206ENST00000397408 S100A3P33764 101 aa19.48■□□□□ 0.71
TSPAN4-206ENST00000397408 PIGAP37287 484 aa19.48■□□□□ 0.71
TSPAN4-206ENST00000397408 DNASE1L1P49184 302 aa19.48■□□□□ 0.71
TSPAN4-206ENST00000397408 PSPHP78330 225 aa19.48■□□□□ 0.71
TSPAN4-206ENST00000397408 PHC1P78364 1004 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms