RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 GABREP78334 506 aa11.77□□□□□ -0.53
SMU1-201ENST00000397149 PKDCCQ504Y2 493 aa11.77□□□□□ -0.53
SMU1-201ENST00000397149 TMEM201Q5SNT2 666 aa11.77□□□□□ -0.53
SMU1-201ENST00000397149 KCNIP4Q6PIL6 250 aa11.77□□□□□ -0.53
SMU1-201ENST00000397149 PRR22Q8IZ63 422 aa11.77□□□□□ -0.53
SMU1-201ENST00000397149 PPP1R35Q8TAP8 253 aa11.77□□□□□ -0.53
SMU1-201ENST00000397149 C3orf49Q96BT1 292 aa11.77□□□□□ -0.53
SMU1-201ENST00000397149 HHIPQ96QV1 700 aa11.77□□□□□ -0.53
SMU1-201ENST00000397149 DHX33Q9H6R0 707 aaKnown RBP11.77□□□□□ -0.53
SMU1-201ENST00000397149 SACM1LQ9NTJ5 587 aa11.77□□□□□ -0.53
SMU1-201ENST00000397149 HSFX1Q9UBD0 423 aa11.77□□□□□ -0.53
SMU1-201ENST00000397149 CAMK2AQ9UQM7 478 aa11.77□□□□□ -0.53
SMU1-201ENST00000397149 GOLT1BQ9Y3E0 138 aa11.77□□□□□ -0.53
SMU1-201ENST00000397149 FOXD2O60548 495 aaPredicted RBP11.77□□□□□ -0.53
SMU1-201ENST00000397149 MAOAP21397 527 aa11.77□□□□□ -0.53
SMU1-201ENST00000397149 TLDC1Q6P9B6 456 aa11.77□□□□□ -0.53
SMU1-201ENST00000397149 CMIPQ8IY22 773 aa11.77□□□□□ -0.53
SMU1-201ENST00000397149 ASCC1Q8N9N2 400 aaKnown RBP11.77□□□□□ -0.53
SMU1-201ENST00000397149 OR9A4Q8NGU2 314 aa11.77□□□□□ -0.53
SMU1-201ENST00000397149 OCSTAMPQ9BR26 566 aa11.77□□□□□ -0.53
SMU1-201ENST00000397149 GJD2Q9UKL4 321 aa11.77□□□□□ -0.53
SMU1-201ENST00000397149 PXDNLA1KZ92 1463 aa11.77□□□□□ -0.53
SMU1-201ENST00000397149 MANBAO00462 879 aa11.77□□□□□ -0.53
SMU1-201ENST00000397149 INHAP05111 366 aa11.77□□□□□ -0.53
SMU1-201ENST00000397149 L1CAMP32004 1257 aa11.77□□□□□ -0.53
SMU1-201ENST00000397149 NSDHLQ15738 373 aa11.77□□□□□ -0.53
SMU1-201ENST00000397149 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.77□□□□□ -0.53
SMU1-201ENST00000397149 LIPJQ5W064 366 aa11.77□□□□□ -0.53
SMU1-201ENST00000397149 SLC18B1Q6NT16 456 aa11.77□□□□□ -0.53
SMU1-201ENST00000397149 FAM199XQ6PEV8 388 aaPredicted RBP11.77□□□□□ -0.53
SMU1-201ENST00000397149 BAGE3Q86Y29 109 aa11.77□□□□□ -0.53
SMU1-201ENST00000397149 BAGE2Q86Y30 109 aa11.77□□□□□ -0.53
SMU1-201ENST00000397149 METTL4Q8N3J2 472 aa11.77□□□□□ -0.53
SMU1-201ENST00000397149 OR9I1Q8NGQ6 314 aa11.77□□□□□ -0.53
SMU1-201ENST00000397149 SPTSSAQ969W0 71 aa11.77□□□□□ -0.53
SMU1-201ENST00000397149 GIMAP2Q9UG22 337 aa11.77□□□□□ -0.53
SMU1-201ENST00000397149 PISDQ9UG56 409 aa11.77□□□□□ -0.53
SMU1-201ENST00000397149 SLC23A2Q9UGH3 650 aa11.77□□□□□ -0.53
SMU1-201ENST00000397149 HCN4Q9Y3Q4 1203 aa11.77□□□□□ -0.53
SMU1-201ENST00000397149 ARHGEF5Q12774 1597 aa11.77□□□□□ -0.53
SMU1-201ENST00000397149 IL32P24001 234 aa11.77□□□□□ -0.53
SMU1-201ENST00000397149 CDKN2BP42772 138 aa11.77□□□□□ -0.53
SMU1-201ENST00000397149 FAM180BQ6P0A1 224 aa11.77□□□□□ -0.53
SMU1-201ENST00000397149 NRROSQ86YC3 692 aa11.77□□□□□ -0.53
SMU1-201ENST00000397149 DDIT4LQ96D03 193 aa11.77□□□□□ -0.53
SMU1-201ENST00000397149 YJEFN3A6XGL0 299 aa11.76□□□□□ -0.53
SMU1-201ENST00000397149 SYN3O14994 580 aa11.76□□□□□ -0.53
SMU1-201ENST00000397149 TYRP14679 529 aa11.76□□□□□ -0.53
SMU1-201ENST00000397149 ZNF182P17025 639 aaPredicted RBP11.76□□□□□ -0.53
SMU1-201ENST00000397149 ACVRL1P37023 503 aa11.76□□□□□ -0.53
SMU1-201ENST00000397149 ARL6IP1Q15041 203 aa11.76□□□□□ -0.53
SMU1-201ENST00000397149 PLCXD3Q63HM9 321 aa11.76□□□□□ -0.53
SMU1-201ENST00000397149 OR9A1PQ8NGU1 263 aa11.76□□□□□ -0.53
SMU1-201ENST00000397149 RBMXL1Q96E39 390 aaKnown RBP11.76□□□□□ -0.53
SMU1-201ENST00000397149 ACBD6Q9BR61 282 aa11.76□□□□□ -0.53
SMU1-201ENST00000397149 SOX17Q9H6I2 414 aaPredicted RBP11.76□□□□□ -0.53
SMU1-201ENST00000397149 TMEM248Q9NWD8 314 aa11.76□□□□□ -0.53
SMU1-201ENST00000397149 ZNF230Q9UIE0 474 aaPredicted RBP11.76□□□□□ -0.53
SMU1-201ENST00000397149 ZDHHC2Q9UIJ5 367 aa11.76□□□□□ -0.53
SMU1-201ENST00000397149 LOC105369274A0A096LPK9 316 aa11.76□□□□□ -0.53
SMU1-201ENST00000397149 J3KR12 359 aa11.76□□□□□ -0.53
SMU1-201ENST00000397149 SEC14L2O76054 403 aa11.76□□□□□ -0.53
SMU1-201ENST00000397149 GAAP10253 952 aa11.76□□□□□ -0.53
SMU1-201ENST00000397149 IMPDH1P20839 514 aa11.76□□□□□ -0.53
SMU1-201ENST00000397149 VIPR2P41587 438 aa11.76□□□□□ -0.53
SMU1-201ENST00000397149 GCGRP47871 477 aa11.76□□□□□ -0.53
SMU1-201ENST00000397149 AKR1C1Q04828 323 aa11.76□□□□□ -0.53
SMU1-201ENST00000397149 AGTRAPQ6RW13 159 aa11.76□□□□□ -0.53
SMU1-201ENST00000397149 OR4N4Q8N0Y3 316 aa11.76□□□□□ -0.53
SMU1-201ENST00000397149 IRGQQ8WZA9 623 aa11.76□□□□□ -0.53
SMU1-201ENST00000397149 ZNF845Q96IR2 970 aaPredicted RBP11.76□□□□□ -0.53
SMU1-201ENST00000397149 OR4K3Q96R72 315 aa11.76□□□□□ -0.53
SMU1-201ENST00000397149 RPL26L1Q9UNX3 145 aaKnown RBP11.76□□□□□ -0.53
SMU1-201ENST00000397149 B3GNT3Q9Y2A9 372 aa11.76□□□□□ -0.53
SMU1-201ENST00000397149 MYH10P35580 1976 aa11.76□□□□□ -0.53
SMU1-201ENST00000397149 SPATA31C2B4DYI2 1134 aa11.76□□□□□ -0.53
SMU1-201ENST00000397149 DUX1O43812 170 aa11.76□□□□□ -0.53
SMU1-201ENST00000397149 OAS1P00973 400 aaKnown RBP11.76□□□□□ -0.53
SMU1-201ENST00000397149 PGCP20142 388 aa11.76□□□□□ -0.53
SMU1-201ENST00000397149 OMGP23515 440 aa11.76□□□□□ -0.53
SMU1-201ENST00000397149 EMP3P54852 163 aa11.76□□□□□ -0.53
SMU1-201ENST00000397149 F2RL1P55085 397 aa11.76□□□□□ -0.53
SMU1-201ENST00000397149 FADDQ13158 208 aa11.76□□□□□ -0.53
SMU1-201ENST00000397149 KCNJ11Q14654 390 aa11.76□□□□□ -0.53
SMU1-201ENST00000397149 REEP3Q6NUK4 255 aa11.76□□□□□ -0.53
SMU1-201ENST00000397149 CILP2Q8IUL8 1156 aa11.76□□□□□ -0.53
SMU1-201ENST00000397149 C11orf42Q8N5U0 333 aa11.76□□□□□ -0.53
SMU1-201ENST00000397149 DAZLQ92904 295 aaKnown RBP11.76□□□□□ -0.53
SMU1-201ENST00000397149 BIRC7Q96CA5 298 aa11.76□□□□□ -0.53
SMU1-201ENST00000397149 DERAQ9Y315 318 aa11.76□□□□□ -0.53
SMU1-201ENST00000397149 C2orf78A6NCI8 922 aa11.76□□□□□ -0.53
SMU1-201ENST00000397149 SPATA31C1P0DKV0 1188 aa11.76□□□□□ -0.53
SMU1-201ENST00000397149 PRKCIP41743 596 aa11.76□□□□□ -0.53
SMU1-201ENST00000397149 MLF1P58340 268 aa11.76□□□□□ -0.53
SMU1-201ENST00000397149 ANKRD54Q6NXT1 300 aa11.76□□□□□ -0.53
SMU1-201ENST00000397149 DNAJB8Q8NHS0 232 aa11.76□□□□□ -0.53
SMU1-201ENST00000397149 CHTF18Q8WVB6 975 aa11.76□□□□□ -0.53
SMU1-201ENST00000397149 TRMT2BQ96GJ1 504 aaKnown RBP11.76□□□□□ -0.53
SMU1-201ENST00000397149 HAPLN3Q96S86 360 aa11.76□□□□□ -0.53
SMU1-201ENST00000397149 SDCBP2Q9H190 292 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms