RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 KCNIP1Q9NZI2 227 aa14.84□□□□□ -0.03
GNE-202ENST00000396594 LDB2O43679 373 aa14.84□□□□□ -0.03
GNE-202ENST00000396594 CA3P07451 260 aa14.84□□□□□ -0.03
GNE-202ENST00000396594 F3P13726 295 aa14.84□□□□□ -0.03
GNE-202ENST00000396594 MLC1Q15049 377 aa14.84□□□□□ -0.03
GNE-202ENST00000396594 CMIPQ8IY22 773 aa14.84□□□□□ -0.03
GNE-202ENST00000396594 TMEM41AQ96HV5 264 aa14.84□□□□□ -0.03
GNE-202ENST00000396594 TMED9Q9BVK6 235 aa14.84□□□□□ -0.03
GNE-202ENST00000396594 GSTO2Q9H4Y5 243 aa14.84□□□□□ -0.03
GNE-202ENST00000396594 XKR8Q9H6D3 395 aa14.84□□□□□ -0.03
GNE-202ENST00000396594 FBRSL1Q9HCM7 1045 aaKnown RBP14.84□□□□□ -0.03
GNE-202ENST00000396594 ITGAMP11215 1152 aa14.83□□□□□ -0.03
GNE-202ENST00000396594 CDK2P24941 298 aa14.83□□□□□ -0.03
GNE-202ENST00000396594 ADRA1AP35348 466 aa14.83□□□□□ -0.03
GNE-202ENST00000396594 GALK1P51570 392 aa14.83□□□□□ -0.03
GNE-202ENST00000396594 GRB7Q14451 532 aa14.83□□□□□ -0.03
GNE-202ENST00000396594 CCDC71LQ8N9Z2 235 aa14.83□□□□□ -0.03
GNE-202ENST00000396594 OR7G3Q8NG95 312 aa14.83□□□□□ -0.03
GNE-202ENST00000396594 SYT3Q9BQG1 590 aa14.83□□□□□ -0.03
GNE-202ENST00000396594 OR10A4Q9H209 315 aa14.83□□□□□ -0.03
GNE-202ENST00000396594 GJD2Q9UKL4 321 aa14.83□□□□□ -0.03
GNE-202ENST00000396594 MCTS1Q9ULC4 181 aaKnown RBP14.83□□□□□ -0.03
GNE-202ENST00000396594 MYH8P13535 1937 aa14.83□□□□□ -0.04
GNE-202ENST00000396594 FOXO6A8MYZ6 492 aa14.83□□□□□ -0.04
GNE-202ENST00000396594 ANHXE9PGG2 379 aa14.83□□□□□ -0.04
GNE-202ENST00000396594 KHNYNO15037 678 aaKnown RBP14.83□□□□□ -0.04
GNE-202ENST00000396594 CACNG3O60359 315 aa14.83□□□□□ -0.04
GNE-202ENST00000396594 GALR3O60755 368 aaPredicted RBP14.83□□□□□ -0.04
GNE-202ENST00000396594 ADORA3P0DMS8 318 aa14.83□□□□□ -0.04
GNE-202ENST00000396594 EML3Q32P44 896 aa14.83□□□□□ -0.04
GNE-202ENST00000396594 ANKRD33Q7Z3H0 272 aa14.83□□□□□ -0.04
GNE-202ENST00000396594 TRIM74Q86UV6 250 aa14.83□□□□□ -0.04
GNE-202ENST00000396594 BPHLQ86WA6 291 aaPredicted RBP14.83□□□□□ -0.04
GNE-202ENST00000396594 GATAD2BQ8WXI9 593 aa14.83□□□□□ -0.04
GNE-202ENST00000396594 TCEAL3Q969E4 200 aa14.83□□□□□ -0.04
GNE-202ENST00000396594 TBX5Q99593 518 aa14.83□□□□□ -0.04
GNE-202ENST00000396594 FUZQ9BT04 418 aa14.83□□□□□ -0.04
GNE-202ENST00000396594 ANKRD19PQ9H560 264 aa14.83□□□□□ -0.04
GNE-202ENST00000396594 KLHL13Q9P2N7 655 aa14.83□□□□□ -0.04
GNE-202ENST00000396594 C2orf92A0A1B0GVN3 265 aa14.83□□□□□ -0.04
GNE-202ENST00000396594 GRXCR1A8MXD5 290 aa14.83□□□□□ -0.04
GNE-202ENST00000396594 CD38P28907 300 aa14.83□□□□□ -0.04
GNE-202ENST00000396594 GJA5P36382 358 aa14.83□□□□□ -0.04
GNE-202ENST00000396594 MC3RP41968 323 aa14.83□□□□□ -0.04
GNE-202ENST00000396594 ARSDP51689 593 aa14.83□□□□□ -0.04
GNE-202ENST00000396594 TGFBR3Q03167 851 aa14.83□□□□□ -0.04
GNE-202ENST00000396594 CDK10Q15131 360 aa14.83□□□□□ -0.04
GNE-202ENST00000396594 LRIT3Q3SXY7 679 aa14.83□□□□□ -0.04
GNE-202ENST00000396594 ALG10BQ5I7T1 473 aa14.83□□□□□ -0.04
GNE-202ENST00000396594 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.83□□□□□ -0.04
GNE-202ENST00000396594 NEIL3Q8TAT5 605 aa14.83□□□□□ -0.04
GNE-202ENST00000396594 ZNF417Q8TAU3 575 aa14.83□□□□□ -0.04
GNE-202ENST00000396594 PROKR1Q8TCW9 393 aa14.83□□□□□ -0.04
GNE-202ENST00000396594 OR5K3A6NET4 321 aa14.83□□□□□ -0.04
GNE-202ENST00000396594 IFNA1P01562 189 aa14.83□□□□□ -0.04
GNE-202ENST00000396594 ZNF28P17035 718 aa14.83□□□□□ -0.04
GNE-202ENST00000396594 SPHARQ15513 63 aa14.83□□□□□ -0.04
GNE-202ENST00000396594 NSDHLQ15738 373 aa14.83□□□□□ -0.04
GNE-202ENST00000396594 ZNF709Q8N972 641 aa14.83□□□□□ -0.04
GNE-202ENST00000396594 OR8K5Q8NH50 307 aa14.83□□□□□ -0.04
GNE-202ENST00000396594 NKD1Q969G9 470 aa14.83□□□□□ -0.04
GNE-202ENST00000396594 ASIC5Q9NY37 505 aa14.83□□□□□ -0.04
GNE-202ENST00000396594 RDH8Q9NYR8 311 aa14.83□□□□□ -0.04
GNE-202ENST00000396594 NPIPB15A6NHN6 443 aaPredicted RBP14.82□□□□□ -0.04
GNE-202ENST00000396594 H0YIV9 168 aa14.82□□□□□ -0.04
GNE-202ENST00000396594 RPP14O95059 124 aaKnown RBP14.82□□□□□ -0.04
GNE-202ENST00000396594 EMP2P54851 167 aa14.82□□□□□ -0.04
GNE-202ENST00000396594 RAB38P57729 211 aa14.82□□□□□ -0.04
GNE-202ENST00000396594 ERVPABLB-1P60509 514 aa14.82□□□□□ -0.04
GNE-202ENST00000396594 PITX1P78337 314 aaPredicted RBP14.82□□□□□ -0.04
GNE-202ENST00000396594 SCRN3Q0VDG4 424 aa14.82□□□□□ -0.04
GNE-202ENST00000396594 BCL2L15Q5TBC7 163 aa14.82□□□□□ -0.04
GNE-202ENST00000396594 LIX1LQ8IVB5 337 aa14.82□□□□□ -0.04
GNE-202ENST00000396594 UCN3Q969E3 161 aa14.82□□□□□ -0.04
GNE-202ENST00000396594 FOLH1BQ9HBA9 442 aa14.82□□□□□ -0.04
GNE-202ENST00000396594 FAM118AQ9NWS6 357 aa14.82□□□□□ -0.04
GNE-202ENST00000396594 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.82□□□□□ -0.04
GNE-202ENST00000396594 PRSS38A1L453 326 aa14.82□□□□□ -0.04
GNE-202ENST00000396594 VILLO15195 856 aa14.82□□□□□ -0.04
GNE-202ENST00000396594 HOXC11O43248 304 aaPredicted RBP14.82□□□□□ -0.04
GNE-202ENST00000396594 CHAF1BQ13112 559 aa14.82□□□□□ -0.04
GNE-202ENST00000396594 RAET1LQ5VY80 246 aa14.82□□□□□ -0.04
GNE-202ENST00000396594 ANKRD26P1Q6NSI1 321 aa14.82□□□□□ -0.04
GNE-202ENST00000396594 HMBOX1Q6NT76 420 aa14.82□□□□□ -0.04
GNE-202ENST00000396594 VWA5B2Q8N398 1253 aa14.82□□□□□ -0.04
GNE-202ENST00000396594 IL17RCQ8NAC3 791 aa14.82□□□□□ -0.04
GNE-202ENST00000396594 RAB8BQ92930 207 aa14.82□□□□□ -0.04
GNE-202ENST00000396594 CTPS2Q9NRF8 586 aa14.82□□□□□ -0.04
GNE-202ENST00000396594 LHX3Q9UBR4 397 aa14.82□□□□□ -0.04
GNE-202ENST00000396594 CIB4A0PJX0 185 aa14.82□□□□□ -0.04
GNE-202ENST00000396594 PLD2O14939 933 aa14.82□□□□□ -0.04
GNE-202ENST00000396594 ZNF35P13682 527 aa14.82□□□□□ -0.04
GNE-202ENST00000396594 GKP32189 559 aa14.82□□□□□ -0.04
GNE-202ENST00000396594 CPOXP36551 454 aa14.82□□□□□ -0.04
GNE-202ENST00000396594 S100A7AQ86SG5 101 aa14.82□□□□□ -0.04
GNE-202ENST00000396594 OR7G1Q8NGA0 311 aa14.82□□□□□ -0.04
GNE-202ENST00000396594 OR5L1Q8NGL2 311 aa14.82□□□□□ -0.04
GNE-202ENST00000396594 GPN2Q9H9Y4 310 aaPredicted RBP14.82□□□□□ -0.04
GNE-202ENST00000396594 SARDHQ9UL12 918 aa14.82□□□□□ -0.04
GNE-202ENST00000396594 CA14Q9ULX7 337 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms