RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 GALTP07902 379 aa13.33□□□□□ -0.28
COL4A3-202ENST00000396578 UGT2B7P16662 529 aa13.33□□□□□ -0.28
COL4A3-202ENST00000396578 SLC2A5P22732 501 aa13.33□□□□□ -0.28
COL4A3-202ENST00000396578 HRH2P25021 359 aa13.33□□□□□ -0.28
COL4A3-202ENST00000396578 HAS2Q92819 552 aa13.33□□□□□ -0.28
COL4A3-202ENST00000396578 ELMOD3Q96FG2 381 aa13.33□□□□□ -0.28
COL4A3-202ENST00000396578 SMOXQ9NWM0 555 aa13.33□□□□□ -0.28
COL4A3-202ENST00000396578 ABCC6O95255 1503 aa13.33□□□□□ -0.28
COL4A3-202ENST00000396578 IFT172Q9UG01 1749 aa13.33□□□□□ -0.28
COL4A3-202ENST00000396578 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.33□□□□□ -0.28
COL4A3-202ENST00000396578 NRP1O14786 923 aa13.33□□□□□ -0.28
COL4A3-202ENST00000396578 KDELR2P33947 212 aa13.33□□□□□ -0.28
COL4A3-202ENST00000396578 SNU13P55769 128 aaKnown RBP13.33□□□□□ -0.28
COL4A3-202ENST00000396578 GSTM4Q03013 218 aa13.33□□□□□ -0.28
COL4A3-202ENST00000396578 RBM39Q14498 530 aaKnown RBP13.33□□□□□ -0.28
COL4A3-202ENST00000396578 ASPGQ86U10 573 aa13.33□□□□□ -0.28
COL4A3-202ENST00000396578 CHCHD4Q8N4Q1 142 aa13.33□□□□□ -0.28
COL4A3-202ENST00000396578 MRI1Q9BV20 369 aa13.33□□□□□ -0.28
COL4A3-202ENST00000396578 HINT2Q9BX68 163 aa13.33□□□□□ -0.28
COL4A3-202ENST00000396578 HSD3B7Q9H2F3 369 aa13.33□□□□□ -0.28
COL4A3-202ENST00000396578 PEAK1Q9H792 1746 aa13.33□□□□□ -0.28
COL4A3-202ENST00000396578 MST1RQ04912 1400 aa13.33□□□□□ -0.28
COL4A3-202ENST00000396578 RNF144AP50876 292 aaPredicted RBP13.33□□□□□ -0.28
COL4A3-202ENST00000396578 CSNK2A1P68400 391 aaPredicted RBP13.33□□□□□ -0.28
COL4A3-202ENST00000396578 GRB7Q14451 532 aa13.33□□□□□ -0.28
COL4A3-202ENST00000396578 DPY19L2P1Q6NXN4 242 aa13.33□□□□□ -0.28
COL4A3-202ENST00000396578 BLOC1S3Q6QNY0 202 aa13.33□□□□□ -0.28
COL4A3-202ENST00000396578 METTL27Q8N6F8 245 aaPredicted RBP13.33□□□□□ -0.28
COL4A3-202ENST00000396578 CSNK2A3Q8NEV1 391 aa13.33□□□□□ -0.28
COL4A3-202ENST00000396578 OR51T1Q8NGJ9 327 aa13.33□□□□□ -0.28
COL4A3-202ENST00000396578 CLEC4DQ8WXI8 215 aa13.33□□□□□ -0.28
COL4A3-202ENST00000396578 TM9SF4Q92544 642 aa13.33□□□□□ -0.28
COL4A3-202ENST00000396578 ARL5BQ96KC2 179 aa13.33□□□□□ -0.28
COL4A3-202ENST00000396578 COQ3Q9NZJ6 369 aa13.33□□□□□ -0.28
COL4A3-202ENST00000396578 PRAMEF11O60813 436 aa13.32□□□□□ -0.28
COL4A3-202ENST00000396578 ERVK-16P61578 105 aa13.32□□□□□ -0.28
COL4A3-202ENST00000396578 KIAA1211LQ6NV74 962 aa13.32□□□□□ -0.28
COL4A3-202ENST00000396578 ENPP6Q6UWR7 440 aa13.32□□□□□ -0.28
COL4A3-202ENST00000396578 RAB9BQ9NP90 201 aa13.32□□□□□ -0.28
COL4A3-202ENST00000396578 VEGFDO43915 354 aa13.32□□□□□ -0.28
COL4A3-202ENST00000396578 SNAPINO95295 136 aa13.32□□□□□ -0.28
COL4A3-202ENST00000396578 C6P13671 934 aa13.32□□□□□ -0.28
COL4A3-202ENST00000396578 REM2Q8IYK8 340 aaPredicted RBP13.32□□□□□ -0.28
COL4A3-202ENST00000396578 ZNF486Q96H40 463 aaPredicted RBP13.32□□□□□ -0.28
COL4A3-202ENST00000396578 ZNF419Q96HQ0 510 aaPredicted RBP13.32□□□□□ -0.28
COL4A3-202ENST00000396578 PLCXD1Q9NUJ7 323 aa13.32□□□□□ -0.28
COL4A3-202ENST00000396578 CD300AQ9UGN4 299 aa13.32□□□□□ -0.28
COL4A3-202ENST00000396578 POU2F3Q9UKI9 436 aa13.32□□□□□ -0.28
COL4A3-202ENST00000396578 SCO2O43819 266 aa13.32□□□□□ -0.28
COL4A3-202ENST00000396578 ATE1O95260 518 aa13.32□□□□□ -0.28
COL4A3-202ENST00000396578 PRSS3P35030 304 aa13.32□□□□□ -0.28
COL4A3-202ENST00000396578 MOGSQ13724 837 aa13.32□□□□□ -0.28
COL4A3-202ENST00000396578 PEA15Q15121 130 aa13.32□□□□□ -0.28
COL4A3-202ENST00000396578 PROX2Q3B8N5 592 aa13.32□□□□□ -0.28
COL4A3-202ENST00000396578 HACD2Q6Y1H2 254 aa13.32□□□□□ -0.28
COL4A3-202ENST00000396578 RNF111Q6ZNA4 994 aa13.32□□□□□ -0.28
COL4A3-202ENST00000396578 OR2T4Q8NH00 348 aa13.32□□□□□ -0.28
COL4A3-202ENST00000396578 FBXL18Q96ME1 805 aa13.32□□□□□ -0.28
COL4A3-202ENST00000396578 FBRSL1Q9HCM7 1045 aaKnown RBP13.32□□□□□ -0.28
COL4A3-202ENST00000396578 WDR6Q9NNW5 1121 aaKnown RBP13.32□□□□□ -0.28
COL4A3-202ENST00000396578 VEGFCP49767 419 aa13.32□□□□□ -0.28
COL4A3-202ENST00000396578 C6orf120Q7Z4R8 191 aa13.32□□□□□ -0.28
COL4A3-202ENST00000396578 DNAJC22Q8N4W6 341 aa13.32□□□□□ -0.28
COL4A3-202ENST00000396578 OR4D6Q8NGJ1 314 aa13.32□□□□□ -0.28
COL4A3-202ENST00000396578 MYLIPQ8WY64 445 aa13.32□□□□□ -0.28
COL4A3-202ENST00000396578 DNAJA3Q96EY1 480 aa13.32□□□□□ -0.28
COL4A3-202ENST00000396578 SLC2A4RGQ9NR83 387 aa13.32□□□□□ -0.28
COL4A3-202ENST00000396578 TP53TG5Q9Y2B4 290 aa13.32□□□□□ -0.28
COL4A3-202ENST00000396578 CACNG2Q9Y698 323 aa13.32□□□□□ -0.28
COL4A3-202ENST00000396578 NAP1L6A6NFF2 107 aa13.32□□□□□ -0.28
COL4A3-202ENST00000396578 AK1P00568 194 aa13.32□□□□□ -0.28
COL4A3-202ENST00000396578 ADAP00813 363 aa13.32□□□□□ -0.28
COL4A3-202ENST00000396578 KCNQ1P51787 676 aa13.32□□□□□ -0.28
COL4A3-202ENST00000396578 ZNF100Q8IYN0 542 aa13.32□□□□□ -0.28
COL4A3-202ENST00000396578 C1orf226A1L170 272 aa13.32□□□□□ -0.28
COL4A3-202ENST00000396578 KNG1P01042 644 aa13.32□□□□□ -0.28
COL4A3-202ENST00000396578 POLR2CP19387 275 aaPredicted RBP13.32□□□□□ -0.28
COL4A3-202ENST00000396578 POU3F4P49335 361 aa13.32□□□□□ -0.28
COL4A3-202ENST00000396578 TMEM35AQ53FP2 167 aa13.32□□□□□ -0.28
COL4A3-202ENST00000396578 FAM69AQ5T7M9 428 aa13.32□□□□□ -0.28
COL4A3-202ENST00000396578 TXNDC8Q6A555 127 aa13.32□□□□□ -0.28
COL4A3-202ENST00000396578 LEG1Q6P5S2 330 aa13.32□□□□□ -0.28
COL4A3-202ENST00000396578 IGDCC3Q8IVU1 814 aa13.32□□□□□ -0.28
COL4A3-202ENST00000396578 ZNF808Q8N4W9 903 aaPredicted RBP13.32□□□□□ -0.28
COL4A3-202ENST00000396578 DAZLQ92904 295 aaKnown RBP13.32□□□□□ -0.28
COL4A3-202ENST00000396578 LMF1Q96S06 567 aa13.32□□□□□ -0.28
COL4A3-202ENST00000396578 KCTD3Q9Y597 815 aa13.32□□□□□ -0.28
COL4A3-202ENST00000396578 C3P01024 1663 aa13.32□□□□□ -0.28
COL4A3-202ENST00000396578 FUOMA2VDF0 154 aa13.32□□□□□ -0.28
COL4A3-202ENST00000396578 SCAMP2O15127 329 aaKnown RBP13.32□□□□□ -0.28
COL4A3-202ENST00000396578 C1GALT1C1LP0DN25 315 aa13.32□□□□□ -0.28
COL4A3-202ENST00000396578 PLCXD2Q0VAA5 305 aa13.32□□□□□ -0.28
COL4A3-202ENST00000396578 HES5Q5TA89 166 aa13.32□□□□□ -0.28
COL4A3-202ENST00000396578 SGCZQ96LD1 299 aa13.32□□□□□ -0.28
COL4A3-202ENST00000396578 FAM83CQ9BQN1 747 aa13.32□□□□□ -0.28
COL4A3-202ENST00000396578 PELOQ9BRX2 385 aaKnown RBP13.32□□□□□ -0.28
COL4A3-202ENST00000396578 PRAF2O60831 178 aa13.31□□□□□ -0.28
COL4A3-202ENST00000396578 CSF1P09603 554 aa13.31□□□□□ -0.28
COL4A3-202ENST00000396578 PGCP20142 388 aa13.31□□□□□ -0.28
COL4A3-202ENST00000396578 CD6P30203 668 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms