RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 QRSL1Q9H0R6 528 aaKnown RBP14.01□□□□□ -0.17
CBX3-202ENST00000396386 CACYBPQ9HB71 228 aaKnown RBP14.01□□□□□ -0.17
CBX3-202ENST00000396386 TP53BP1Q12888 1972 aaPredicted RBP14.01□□□□□ -0.17
CBX3-202ENST00000396386 MAN1A2O60476 641 aa14.01□□□□□ -0.17
CBX3-202ENST00000396386 NME6O75414 186 aaPredicted RBP14.01□□□□□ -0.17
CBX3-202ENST00000396386 CDK4P11802 303 aa14.01□□□□□ -0.17
CBX3-202ENST00000396386 CDH3P22223 829 aa14.01□□□□□ -0.17
CBX3-202ENST00000396386 PSMB9P28065 219 aa14.01□□□□□ -0.17
CBX3-202ENST00000396386 MAZP56270 477 aaKnown RBP14.01□□□□□ -0.17
CBX3-202ENST00000396386 ZNF628Q5EBL2 1059 aa14.01□□□□□ -0.17
CBX3-202ENST00000396386 KLHL35Q6PF15 583 aa14.01□□□□□ -0.17
CBX3-202ENST00000396386 WDR53Q7Z5U6 358 aaPredicted RBP14.01□□□□□ -0.17
CBX3-202ENST00000396386 GJD3Q8N144 294 aa14.01□□□□□ -0.17
CBX3-202ENST00000396386 CA13Q8N1Q1 262 aa14.01□□□□□ -0.17
CBX3-202ENST00000396386 SLC7A13Q8TCU3 470 aa14.01□□□□□ -0.17
CBX3-202ENST00000396386 CDS1Q92903 461 aa14.01□□□□□ -0.17
CBX3-202ENST00000396386 SLC35A4Q96G79 324 aa14.01□□□□□ -0.17
CBX3-202ENST00000396386 SH3GL3Q99963 347 aa14.01□□□□□ -0.17
CBX3-202ENST00000396386 FKBP14Q9NWM8 211 aa14.01□□□□□ -0.17
CBX3-202ENST00000396386 REV1Q9UBZ9 1251 aa14.01□□□□□ -0.17
CBX3-202ENST00000396386 HEMK1Q9Y5R4 338 aaPredicted RBP14.01□□□□□ -0.17
CBX3-202ENST00000396386 M0R129 80 aa14□□□□□ -0.17
CBX3-202ENST00000396386 FGF17O60258 216 aa14□□□□□ -0.17
CBX3-202ENST00000396386 GABARAPO95166 117 aa14□□□□□ -0.17
CBX3-202ENST00000396386 CSF2P04141 144 aa14□□□□□ -0.17
CBX3-202ENST00000396386 WNT1P04628 370 aa14□□□□□ -0.17
CBX3-202ENST00000396386 ATP1B1P05026 303 aa14□□□□□ -0.17
CBX3-202ENST00000396386 NME1P15531 152 aaKnown RBP14□□□□□ -0.17
CBX3-202ENST00000396386 POU1F1P28069 291 aa14□□□□□ -0.17
CBX3-202ENST00000396386 CD38P28907 300 aa14□□□□□ -0.17
CBX3-202ENST00000396386 PRKAR1BP31321 381 aa14□□□□□ -0.17
CBX3-202ENST00000396386 ST13P50502 369 aaKnown RBP14□□□□□ -0.17
CBX3-202ENST00000396386 PDX1P52945 283 aa14□□□□□ -0.17
CBX3-202ENST00000396386 NUDT6P53370 316 aa14□□□□□ -0.17
CBX3-202ENST00000396386 ID2Q02363 134 aa14□□□□□ -0.17
CBX3-202ENST00000396386 TBCEQ15813 527 aaPredicted RBP14□□□□□ -0.17
CBX3-202ENST00000396386 NDUFA9Q16795 377 aa14□□□□□ -0.17
CBX3-202ENST00000396386 LEXMQ3ZCV2 418 aa14□□□□□ -0.17
CBX3-202ENST00000396386 CHCHD2P9Q5T1J5 151 aaPredicted RBP14□□□□□ -0.17
CBX3-202ENST00000396386 PODNL1Q6PEZ8 512 aa14□□□□□ -0.17
CBX3-202ENST00000396386 ZNF438Q7Z4V0 828 aa14□□□□□ -0.17
CBX3-202ENST00000396386 GKN2Q86XP6 184 aa14□□□□□ -0.17
CBX3-202ENST00000396386 VRK2Q86Y07 508 aa14□□□□□ -0.17
CBX3-202ENST00000396386 TMEFF1Q8IYR6 380 aa14□□□□□ -0.17
CBX3-202ENST00000396386 NLGN4XQ8N0W4 816 aa14□□□□□ -0.17
CBX3-202ENST00000396386 SLC16A11Q8NCK7 471 aa14□□□□□ -0.17
CBX3-202ENST00000396386 OR5T3Q8NGG3 340 aa14□□□□□ -0.17
CBX3-202ENST00000396386 SLC9A6Q92581 669 aa14□□□□□ -0.17
CBX3-202ENST00000396386 PCED1AQ9H1Q7 454 aa14□□□□□ -0.17
CBX3-202ENST00000396386 IL21RQ9HBE5 538 aa14□□□□□ -0.17
CBX3-202ENST00000396386 C11orf16Q9NQ32 467 aa14□□□□□ -0.17
CBX3-202ENST00000396386 KLHL28Q9NXS3 571 aa14□□□□□ -0.17
CBX3-202ENST00000396386 A0A1W2PR77 199 aa13.99□□□□□ -0.17
CBX3-202ENST00000396386 CLCA1A8K7I4 914 aa13.99□□□□□ -0.17
CBX3-202ENST00000396386 METTL12A8MUP2 240 aa13.99□□□□□ -0.17
CBX3-202ENST00000396386 UBXN7O94888 489 aa13.99□□□□□ -0.17
CBX3-202ENST00000396386 SOX14O95416 240 aa13.99□□□□□ -0.17
CBX3-202ENST00000396386 BCL10O95999 233 aa13.99□□□□□ -0.17
CBX3-202ENST00000396386 CDK1P06493 297 aa13.99□□□□□ -0.17
CBX3-202ENST00000396386 IFI6P09912 130 aa13.99□□□□□ -0.17
CBX3-202ENST00000396386 ACP2P11117 423 aa13.99□□□□□ -0.17
CBX3-202ENST00000396386 CNR2P34972 360 aa13.99□□□□□ -0.17
CBX3-202ENST00000396386 RAB38P57729 211 aa13.99□□□□□ -0.17
CBX3-202ENST00000396386 TARDBPQ13148 414 aaKnown RBP eCLIP13.99□□□□□ -0.173e-12■□□□□ 10.3
CBX3-202ENST00000396386 ILKQ13418 452 aa13.99□□□□□ -0.17
CBX3-202ENST00000396386 DEFB110Q30KQ9 67 aa13.99□□□□□ -0.17
CBX3-202ENST00000396386 FHL5Q5TD97 284 aa13.99□□□□□ -0.17
CBX3-202ENST00000396386 UBE2UQ5VVX9 321 aa13.99□□□□□ -0.17
CBX3-202ENST00000396386 SLX4IPQ5VYV7 408 aa13.99□□□□□ -0.17
CBX3-202ENST00000396386 TMEM236Q5W0B7 351 aa13.99□□□□□ -0.17
CBX3-202ENST00000396386 FRRS1Q6ZNA5 592 aa13.99□□□□□ -0.17
CBX3-202ENST00000396386 IQCHQ86VS3 1027 aa13.99□□□□□ -0.17
CBX3-202ENST00000396386 DEFB119Q8N690 84 aa13.99□□□□□ -0.17
CBX3-202ENST00000396386 TANKQ92844 425 aa13.99□□□□□ -0.17
CBX3-202ENST00000396386 YIPF6Q96EC8 236 aa13.99□□□□□ -0.17
CBX3-202ENST00000396386 POLR2J3Q9H1A7 115 aaKnown RBP13.99□□□□□ -0.17
CBX3-202ENST00000396386 CHRDQ9H2X0 955 aa13.99□□□□□ -0.17
CBX3-202ENST00000396386 ANKHQ9HCJ1 492 aa13.99□□□□□ -0.17
CBX3-202ENST00000396386 MAN2C1Q9NTJ4 1040 aa13.99□□□□□ -0.17
CBX3-202ENST00000396386 CLN6Q9NWW5 311 aa13.99□□□□□ -0.17
CBX3-202ENST00000396386 C19orf53Q9UNZ5 99 aaPredicted RBP13.99□□□□□ -0.17
CBX3-202ENST00000396386 DOLKQ9UPQ8 538 aa13.99□□□□□ -0.17
CBX3-202ENST00000396386 A0A087WV62 115 aa13.99□□□□□ -0.17
CBX3-202ENST00000396386 SH3D21A4FU49 640 aa13.99□□□□□ -0.17
CBX3-202ENST00000396386 TLR4O00206 839 aa13.99□□□□□ -0.17
CBX3-202ENST00000396386 DLL1O00548 723 aa13.99□□□□□ -0.17
CBX3-202ENST00000396386 CYR61O00622 381 aa13.99□□□□□ -0.17
CBX3-202ENST00000396386 LDB3O75112 727 aa13.99□□□□□ -0.17
CBX3-202ENST00000396386 ZIC2O95409 532 aaPredicted RBP13.99□□□□□ -0.17
CBX3-202ENST00000396386 GPR75O95800 540 aa13.99□□□□□ -0.17
CBX3-202ENST00000396386 NT5EP21589 574 aa13.99□□□□□ -0.17
CBX3-202ENST00000396386 ACVR2AP27037 513 aa13.99□□□□□ -0.17
CBX3-202ENST00000396386 FASLGP48023 281 aa13.99□□□□□ -0.17
CBX3-202ENST00000396386 TAS2R41P59536 307 aa13.99□□□□□ -0.17
CBX3-202ENST00000396386 DCTN2Q13561 401 aaKnown RBP13.99□□□□□ -0.17
CBX3-202ENST00000396386 ARHGAP11BQ3KRB8 267 aa13.99□□□□□ -0.17
CBX3-202ENST00000396386 PTCHD4Q6ZW05 846 aa13.99□□□□□ -0.17
CBX3-202ENST00000396386 TMEM52Q8NDY8 209 aa13.99□□□□□ -0.17
CBX3-202ENST00000396386 OR4K5Q8NGD3 323 aa13.99□□□□□ -0.17
CBX3-202ENST00000396386 OR52P1PQ8NH57 321 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms