RNA–Protein interactions for RNA: ENST00000396342.6

DDR1-229, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 675 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-229ENST00000396342 NDRG3Q9UGV2 375 aa14.95□□□□□ -0.02
DDR1-229ENST00000396342 MCM8Q9UJA3 840 aa14.95□□□□□ -0.02
DDR1-229ENST00000396342 EXO1Q9UQ84 846 aaKnown RBP14.95□□□□□ -0.02
DDR1-229ENST00000396342 PLLPQ9Y342 182 aa14.95□□□□□ -0.02
DDR1-229ENST00000396342 TEP1Q99973 2627 aaKnown RBP14.95□□□□□ -0.02
DDR1-229ENST00000396342 MBD3L4A6NDZ8 208 aaPredicted RBP14.94□□□□□ -0.02
DDR1-229ENST00000396342 MBD3L3A6NE82 208 aaPredicted RBP14.94□□□□□ -0.02
DDR1-229ENST00000396342 MBD3L5A6NJ08 208 aaPredicted RBP14.94□□□□□ -0.02
DDR1-229ENST00000396342 A8MT66 165 aa14.94□□□□□ -0.02
DDR1-229ENST00000396342 PCDH7O60245 1069 aa14.94□□□□□ -0.02
DDR1-229ENST00000396342 COQ9O75208 318 aa14.94□□□□□ -0.02
DDR1-229ENST00000396342 OR4F21O95013 312 aa14.94□□□□□ -0.02
DDR1-229ENST00000396342 PTPN6P29350 595 aa14.94□□□□□ -0.02
DDR1-229ENST00000396342 EEFSECP57772 596 aaKnown RBP14.94□□□□□ -0.02
DDR1-229ENST00000396342 ZNHIT3Q15649 155 aaPredicted RBP14.94□□□□□ -0.02
DDR1-229ENST00000396342 CEBPEQ15744 281 aa14.94□□□□□ -0.02
DDR1-229ENST00000396342 IMPG1Q17R60 797 aa14.94□□□□□ -0.02
DDR1-229ENST00000396342 SPDYAQ5MJ70 313 aa14.94□□□□□ -0.02
DDR1-229ENST00000396342 FAM111BQ6SJ93 734 aa14.94□□□□□ -0.02
DDR1-229ENST00000396342 PLCZ1Q86YW0 608 aa14.94□□□□□ -0.02
DDR1-229ENST00000396342 C17orf53Q8N3J3 647 aaPredicted RBP14.94□□□□□ -0.02
DDR1-229ENST00000396342 MMGT1Q8N4V1 131 aa14.94□□□□□ -0.02
DDR1-229ENST00000396342 OR4K17Q8NGC6 315 aa14.94□□□□□ -0.02
DDR1-229ENST00000396342 MBD3L2Q8NHZ7 208 aaPredicted RBP14.94□□□□□ -0.02
DDR1-229ENST00000396342 TM4SF18Q96CE8 201 aa14.94□□□□□ -0.02
DDR1-229ENST00000396342 CCDC126Q96EE4 140 aa14.94□□□□□ -0.02
DDR1-229ENST00000396342 WDYHV1Q96HA8 205 aa14.94□□□□□ -0.02
DDR1-229ENST00000396342 SFXN2Q96NB2 322 aa14.94□□□□□ -0.02
DDR1-229ENST00000396342 RBM24Q9BX46 236 aaKnown RBP14.94□□□□□ -0.02
DDR1-229ENST00000396342 FUT8Q9BYC5 575 aa14.94□□□□□ -0.02
DDR1-229ENST00000396342 IQCGQ9H095 443 aaKnown RBP14.94□□□□□ -0.02
DDR1-229ENST00000396342 STMN4Q9H169 189 aaPredicted RBP14.94□□□□□ -0.02
DDR1-229ENST00000396342 PIGMQ9H3S5 423 aa14.94□□□□□ -0.02
DDR1-229ENST00000396342 ZBTB26Q9HCK0 441 aa14.94□□□□□ -0.02
DDR1-229ENST00000396342 SERHLQ9NQF3 203 aa14.94□□□□□ -0.02
DDR1-229ENST00000396342 MIEF1Q9NQG6 463 aa14.94□□□□□ -0.02
DDR1-229ENST00000396342 STOML1Q9UBI4 398 aa14.94□□□□□ -0.02
DDR1-229ENST00000396342 EIF3LQ9Y262 564 aaKnown RBP14.94□□□□□ -0.02
DDR1-229ENST00000396342 OR6C70A6NIJ9 312 aa14.93□□□□□ -0.02
DDR1-229ENST00000396342 MANBAO00462 879 aa14.93□□□□□ -0.02
DDR1-229ENST00000396342 ENO1P06733 434 aaKnown RBP14.93□□□□□ -0.02
DDR1-229ENST00000396342 CPN1P15169 458 aa14.93□□□□□ -0.02
DDR1-229ENST00000396342 TSPAN8P19075 237 aa14.93□□□□□ -0.02
DDR1-229ENST00000396342 ATP5F1P24539 256 aaPredicted RBP14.93□□□□□ -0.02
DDR1-229ENST00000396342 HSD17B3P37058 310 aa14.93□□□□□ -0.02
DDR1-229ENST00000396342 MAGEA12P43365 314 aa14.93□□□□□ -0.02
DDR1-229ENST00000396342 PKNOX1P55347 436 aa14.93□□□□□ -0.02
DDR1-229ENST00000396342 NAA20P61599 178 aa14.93□□□□□ -0.02
DDR1-229ENST00000396342 SNTB1Q13884 538 aaKnown RBP14.93□□□□□ -0.02
DDR1-229ENST00000396342 DAZAP2Q15038 168 aaPredicted RBP14.93□□□□□ -0.02
DDR1-229ENST00000396342 OR2A2Q6IF42 318 aa14.93□□□□□ -0.02
DDR1-229ENST00000396342 LETMD1Q6P1Q0 360 aa14.93□□□□□ -0.02
DDR1-229ENST00000396342 LARP4Q71RC2 724 aaKnown RBP eCLIP14.93□□□□□ -0.02
DDR1-229ENST00000396342 CDC20BQ86Y33 519 aa14.93□□□□□ -0.02
DDR1-229ENST00000396342 GRAMD2AQ8IUY3 354 aa14.93□□□□□ -0.02
DDR1-229ENST00000396342 CCDC116Q8IYX3 515 aa14.93□□□□□ -0.02
DDR1-229ENST00000396342 FAM9CQ8IZT9 166 aa14.93□□□□□ -0.02
DDR1-229ENST00000396342 RELL2Q8NC24 303 aaPredicted RBP14.93□□□□□ -0.02
DDR1-229ENST00000396342 UHMK1Q8TAS1 419 aaKnown RBP14.93□□□□□ -0.02
DDR1-229ENST00000396342 WNT2BQ93097 391 aa14.93□□□□□ -0.02
DDR1-229ENST00000396342 TMBIM1Q969X1 311 aa14.93□□□□□ -0.02
DDR1-229ENST00000396342 EXOSC8Q96B26 276 aaKnown RBP14.93□□□□□ -0.02
DDR1-229ENST00000396342 HHATLQ9HCP6 504 aa14.93□□□□□ -0.02
DDR1-229ENST00000396342 FARSBQ9NSD9 589 aaKnown RBP14.93□□□□□ -0.02
DDR1-229ENST00000396342 EHD3Q9NZN3 535 aa14.93□□□□□ -0.02
DDR1-229ENST00000396342 CES1P1Q9UKY3 287 aa14.93□□□□□ -0.02
DDR1-229ENST00000396342 DLGAP4Q9Y2H0 992 aa14.93□□□□□ -0.02
DDR1-229ENST00000396342 PLEKHA6Q9Y2H5 1048 aa14.93□□□□□ -0.02
DDR1-229ENST00000396342 CSMD1Q96PZ7 3565 aa14.93□□□□□ -0.02
DDR1-229ENST00000396342 A0A1W2PS29 197 aa14.92□□□□□ -0.02
DDR1-229ENST00000396342 H3BQF6 201 aa14.92□□□□□ -0.02
DDR1-229ENST00000396342 TO15178 435 aa14.92□□□□□ -0.02
DDR1-229ENST00000396342 RAF1P04049 648 aa14.92□□□□□ -0.02
DDR1-229ENST00000396342 GSTA1P08263 222 aa14.92□□□□□ -0.02
DDR1-229ENST00000396342 PCSK2P16519 638 aa14.92□□□□□ -0.02
DDR1-229ENST00000396342 NTSP30990 170 aa14.92□□□□□ -0.02
DDR1-229ENST00000396342 SRD5A2P31213 254 aa14.92□□□□□ -0.02
DDR1-229ENST00000396342 NAGLUP54802 743 aa14.92□□□□□ -0.02
DDR1-229ENST00000396342 PSMD4P55036 377 aaKnown RBP14.92□□□□□ -0.02
DDR1-229ENST00000396342 GALNT1Q10472 559 aaPredicted RBP14.92□□□□□ -0.02
DDR1-229ENST00000396342 TRMT12Q53H54 448 aaKnown RBP14.92□□□□□ -0.02
DDR1-229ENST00000396342 SEM1Q6ZVN7 128 aa14.92□□□□□ -0.02
DDR1-229ENST00000396342 TRMT10CQ7L0Y3 403 aaKnown RBP14.92□□□□□ -0.02
DDR1-229ENST00000396342 TGIF2LYQ8IUE0 185 aa14.92□□□□□ -0.02
DDR1-229ENST00000396342 TRIM42Q8IWZ5 723 aa14.92□□□□□ -0.02
DDR1-229ENST00000396342 IFT20Q8IY31 132 aa14.92□□□□□ -0.02
DDR1-229ENST00000396342 MEIOBQ8N635 442 aa14.92□□□□□ -0.02
DDR1-229ENST00000396342 CDC26Q8NHZ8 85 aa14.92□□□□□ -0.02
DDR1-229ENST00000396342 ZNF675Q8TD23 568 aa14.92□□□□□ -0.02
DDR1-229ENST00000396342 NRGNQ92686 78 aa14.92□□□□□ -0.02
DDR1-229ENST00000396342 ALPK1Q96QP1 1244 aa14.92□□□□□ -0.02
DDR1-229ENST00000396342 ZNF382Q96SR6 550 aa14.92□□□□□ -0.02
DDR1-229ENST00000396342 ADOQ96SZ5 270 aa14.92□□□□□ -0.02
DDR1-229ENST00000396342 SH3GL2Q99962 352 aa14.92□□□□□ -0.02
DDR1-229ENST00000396342 C1QTNF3Q9BXJ4 246 aa14.92□□□□□ -0.02
DDR1-229ENST00000396342 PTGES2Q9H7Z7 377 aa14.92□□□□□ -0.02
DDR1-229ENST00000396342 ANKRD17O75179 2603 aaKnown RBP14.92□□□□□ -0.02
DDR1-229ENST00000396342 FBN2P35556 2912 aa14.91□□□□□ -0.02
DDR1-229ENST00000396342 ZNF407Q9C0G0 2248 aa14.91□□□□□ -0.02
DDR1-229ENST00000396342 C2orf72A6NCS6 295 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms