RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 ZCCHC10Q8TBK6 192 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 FGF14Q92915 247 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 TMEM19Q96HH6 336 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 PKP2Q99959 881 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 ZNF559Q9BR84 538 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 ERVMER34-1Q9H9K5 563 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 PCDHB16Q9NRJ7 776 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 PRKYO43930 277 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 CHRM5P08912 532 aaPredicted RBP3.2□□□□□ -1.9
VPS13C-203ENST00000395896 CPMP14384 443 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 SDC2P34741 201 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 EIF1P41567 113 aaKnown RBP3.2□□□□□ -1.9
VPS13C-203ENST00000395896 TUBB3Q13509 450 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 CCNIQ14094 377 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 GPNMBQ14956 572 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 FAM129CQ86XR2 697 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 FAM86B1Q8N7N1 296 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 TM9SF4Q92544 642 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 HRASLS5Q96KN8 279 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 FCRL4Q96PJ5 515 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 RBP7Q96R05 134 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 VN1R3Q9BXE9 311 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 LOC100506127A0A0U1RQW1 187 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 TLR4O00206 839 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 BTN3A3O00478 584 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 SEC14L5O43304 696 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 NDUFB5O43674 189 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 ZNF432O94892 652 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 NID1P14543 1247 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 NDUFV2P19404 249 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 FOXA1P55317 472 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 CSNK1G2P78368 415 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 ILKQ13418 452 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 HTR4Q13639 388 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 ELAVL1Q15717 326 aaKnown RBP3.2□□□□□ -1.9
VPS13C-203ENST00000395896 KCTD20Q7Z5Y7 419 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 UFD1Q92890 307 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 HSPA12BQ96MM6 686 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 F2RL3Q96RI0 385 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 UCK2Q9BZX2 261 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 ANKRA2Q9H9E1 313 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 TNFRSF10DQ9UBN6 386 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 OR5K3A6NET4 321 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 ARHGEF9O43307 516 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 RENP00797 406 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 ARAFP10398 606 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 OSMP13725 252 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 DRD3P35462 400 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 DCTP40126 519 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 MTNR1AP48039 350 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 E2F1Q01094 437 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 TNFRSF17Q02223 184 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 C19orf47Q8N9M1 422 aaKnown RBP3.2□□□□□ -1.9
VPS13C-203ENST00000395896 CHFRQ96EP1 664 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 ZNF583Q96ND8 569 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 FAM129BQ96TA1 746 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 FEVQ99581 238 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 MNTQ99583 582 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 ZNF717Q9BY31 904 aaPredicted RBP3.2□□□□□ -1.9
VPS13C-203ENST00000395896 SERHLQ9NQF3 203 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 PRR23D1E9PI22 279 aaPredicted RBP3.2□□□□□ -1.9
VPS13C-203ENST00000395896 SCGNO76038 276 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 PRR23D2P0DMB1 279 aaPredicted RBP3.2□□□□□ -1.9
VPS13C-203ENST00000395896 TGFBR2P37173 567 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 SGSHP51688 502 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 CDH11P55287 796 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 GPR68Q15743 365 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 TIGD6Q17RP2 521 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 C6orf141Q5SZD1 244 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 PDSS1Q5T2R2 415 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 USP43Q70EL4 1123 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 TMEM156Q8N614 296 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 SLC37A2Q8TED4 501 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 C3orf30Q96M34 536 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 TTYH1Q9H313 450 aaPredicted RBP3.2□□□□□ -1.9
VPS13C-203ENST00000395896 CMTM6Q9NX76 183 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 COL4A6Q14031 1691 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 KIF26AQ9ULI4 1882 aaPredicted RBP3.2□□□□□ -1.9
VPS13C-203ENST00000395896 GABRR3A8MPY1 467 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 ERCC1P07992 297 aaPredicted RBP3.2□□□□□ -1.9
VPS13C-203ENST00000395896 BCL6P41182 706 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 PAGE3Q5JUK9 113 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 SYCE2Q6PIF2 218 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 RNF111Q6ZNA4 994 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 ASB18Q6ZVZ8 466 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 FAM98AQ8NCA5 519 aaKnown RBP3.2□□□□□ -1.9
VPS13C-203ENST00000395896 OR52P1PQ8NH57 321 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 GATA6Q92908 595 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 PIGUQ9H490 435 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 COPZ2Q9P299 210 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 LRIT1Q9P2V4 623 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 DAPP1Q9UN19 280 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 LOC110117498-PIK3R3F6TDL0 507 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 LRRTM2O43300 516 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 ZNF26P17031 533 aaPredicted RBP3.2□□□□□ -1.9
VPS13C-203ENST00000395896 GLO1Q04760 184 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 CCINQ13939 588 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 ALG10BQ5I7T1 473 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.2□□□□□ -1.9
VPS13C-203ENST00000395896 AHSA2Q719I0 299 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms