RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 COL21A1Q96P44 957 aa12.59□□□□□ -0.39
CXCL12-205ENST00000395794 GNRHR2Q96P88 292 aa12.59□□□□□ -0.39
CXCL12-205ENST00000395794 STMN4Q9H169 189 aaPredicted RBP12.59□□□□□ -0.39
CXCL12-205ENST00000395794 C12orf65Q9H3J6 166 aaKnown RBP12.59□□□□□ -0.39
CXCL12-205ENST00000395794 TAS2R9Q9NYW1 312 aa12.59□□□□□ -0.39
CXCL12-205ENST00000395794 SPRR3Q9UBC9 169 aa12.59□□□□□ -0.39
CXCL12-205ENST00000395794 GPR55Q9Y2T6 319 aaPredicted RBP12.59□□□□□ -0.39
CXCL12-205ENST00000395794 C15orf41Q9Y2V0 281 aa12.59□□□□□ -0.39
CXCL12-205ENST00000395794 PCDHGB3Q9Y5G1 929 aa12.59□□□□□ -0.39
CXCL12-205ENST00000395794 GNB5O14775 395 aa12.58□□□□□ -0.4
CXCL12-205ENST00000395794 AZIN1O14977 448 aa12.58□□□□□ -0.4
CXCL12-205ENST00000395794 TO15178 435 aa12.58□□□□□ -0.4
CXCL12-205ENST00000395794 COQ9O75208 318 aa12.58□□□□□ -0.4
CXCL12-205ENST00000395794 ERN1O75460 977 aaKnown RBP12.58□□□□□ -0.4
CXCL12-205ENST00000395794 SLITRK5O94991 958 aa12.58□□□□□ -0.4
CXCL12-205ENST00000395794 HPNP05981 417 aa12.58□□□□□ -0.4
CXCL12-205ENST00000395794 IL12BP29460 328 aa12.58□□□□□ -0.4
CXCL12-205ENST00000395794 KIR3DL1P43629 444 aa12.58□□□□□ -0.4
CXCL12-205ENST00000395794 ZFP36L2P47974 494 aaKnown RBP12.58□□□□□ -0.4
CXCL12-205ENST00000395794 CDK9P50750 372 aaKnown RBP12.58□□□□□ -0.4
CXCL12-205ENST00000395794 NCBP2P52298 156 aaKnown RBP eCLIP12.58□□□□□ -0.4
CXCL12-205ENST00000395794 MRPS22P82650 360 aaKnown RBP12.58□□□□□ -0.4
CXCL12-205ENST00000395794 DUSP8Q13202 625 aa12.58□□□□□ -0.4
CXCL12-205ENST00000395794 EFR3AQ14156 821 aa12.58□□□□□ -0.4
CXCL12-205ENST00000395794 NOXRED1Q6NXP6 359 aa12.58□□□□□ -0.4
CXCL12-205ENST00000395794 IKBIPQ70UQ0 350 aa12.58□□□□□ -0.4
CXCL12-205ENST00000395794 PM20D2Q8IYS1 436 aa12.58□□□□□ -0.4
CXCL12-205ENST00000395794 SIMC1Q8NDZ2 872 aa12.58□□□□□ -0.4
CXCL12-205ENST00000395794 OR2W6PQ8NHA6 318 aa12.58□□□□□ -0.4
CXCL12-205ENST00000395794 TMBIM1Q969X1 311 aa12.58□□□□□ -0.4
CXCL12-205ENST00000395794 C11orf24Q96F05 449 aaPredicted RBP12.58□□□□□ -0.4
CXCL12-205ENST00000395794 APOPT1Q96IL0 206 aa12.58□□□□□ -0.4
CXCL12-205ENST00000395794 BTBD9Q96Q07 612 aa12.58□□□□□ -0.4
CXCL12-205ENST00000395794 OSBPL11Q9BXB4 747 aa12.58□□□□□ -0.4
CXCL12-205ENST00000395794 EML4Q9HC35 981 aaKnown RBP12.58□□□□□ -0.4
CXCL12-205ENST00000395794 MYNNQ9NPC7 610 aa12.58□□□□□ -0.4
CXCL12-205ENST00000395794 OR10H1Q9Y4A9 318 aa12.58□□□□□ -0.4
CXCL12-205ENST00000395794 POLR3HQ9Y535 204 aaPredicted RBP12.58□□□□□ -0.4
CXCL12-205ENST00000395794 ITPR2Q14571 2701 aa12.57□□□□□ -0.4
CXCL12-205ENST00000395794 NKX2-6A6NCS4 301 aa12.57□□□□□ -0.4
CXCL12-205ENST00000395794 PRAMEF25A6NGN4 478 aa12.57□□□□□ -0.4
CXCL12-205ENST00000395794 OR6C70A6NIJ9 312 aa12.57□□□□□ -0.4
CXCL12-205ENST00000395794 AHRRA9YTQ3 701 aa12.57□□□□□ -0.4
CXCL12-205ENST00000395794 PLOD3O60568 738 aa12.57□□□□□ -0.4
CXCL12-205ENST00000395794 ICOSLGO75144 302 aa12.57□□□□□ -0.4
CXCL12-205ENST00000395794 JUNP05412 331 aaKnown RBP12.57□□□□□ -0.4
CXCL12-205ENST00000395794 NUDT17P0C025 328 aa12.57□□□□□ -0.4
CXCL12-205ENST00000395794 NEFHP12036 1026 aa12.57□□□□□ -0.4
CXCL12-205ENST00000395794 ENDOUP21128 410 aaKnown RBP12.57□□□□□ -0.4
CXCL12-205ENST00000395794 VSNL1P62760 191 aa12.57□□□□□ -0.4
CXCL12-205ENST00000395794 ZNF155Q12901 538 aaPredicted RBP12.57□□□□□ -0.4
CXCL12-205ENST00000395794 CLEC6AQ6EIG7 209 aa12.57□□□□□ -0.4
CXCL12-205ENST00000395794 FAM71E1Q6IPT2 247 aa12.57□□□□□ -0.4
CXCL12-205ENST00000395794 TMEM81Q6P7N7 255 aa12.57□□□□□ -0.4
CXCL12-205ENST00000395794 EMBQ6PCB8 327 aa12.57□□□□□ -0.4
CXCL12-205ENST00000395794 ULK2Q8IYT8 1036 aa12.57□□□□□ -0.4
CXCL12-205ENST00000395794 CLYBLQ8N0X4 340 aa12.57□□□□□ -0.4
CXCL12-205ENST00000395794 HGDQ93099 445 aa12.57□□□□□ -0.4
CXCL12-205ENST00000395794 ADOQ96SZ5 270 aa12.57□□□□□ -0.4
CXCL12-205ENST00000395794 GATA5Q9BWX5 397 aaPredicted RBP12.57□□□□□ -0.4
CXCL12-205ENST00000395794 UCK2Q9BZX2 261 aa12.57□□□□□ -0.4
CXCL12-205ENST00000395794 ROPN1BQ9BZX4 212 aaPredicted RBP12.57□□□□□ -0.4
CXCL12-205ENST00000395794 ENKD1Q9H0I2 346 aa12.57□□□□□ -0.4
CXCL12-205ENST00000395794 ROPN1Q9HAT0 212 aaPredicted RBP12.57□□□□□ -0.4
CXCL12-205ENST00000395794 LRTM1Q9HBL6 345 aa12.57□□□□□ -0.4
CXCL12-205ENST00000395794 SLC24A3Q9HC58 644 aa12.57□□□□□ -0.4
CXCL12-205ENST00000395794 C1orf109Q9NX04 203 aa12.57□□□□□ -0.4
CXCL12-205ENST00000395794 MKS1Q9NXB0 559 aa12.57□□□□□ -0.4
CXCL12-205ENST00000395794 TAS2R7Q9NYW3 318 aa12.57□□□□□ -0.4
CXCL12-205ENST00000395794 FIS1Q9Y3D6 152 aa12.57□□□□□ -0.4
CXCL12-205ENST00000395794 FAM215AQ9Y5M1 114 aa12.57□□□□□ -0.4
CXCL12-205ENST00000395794 A0A0G2JNJ9 132 aa12.56□□□□□ -0.4
CXCL12-205ENST00000395794 HSPB2A8KAH6 182 aa12.56□□□□□ -0.4
CXCL12-205ENST00000395794 MYO1GB0I1T2 1018 aa12.56□□□□□ -0.4
CXCL12-205ENST00000395794 UGT2B11O75310 529 aa12.56□□□□□ -0.4
CXCL12-205ENST00000395794 CBR3O75828 277 aa12.56□□□□□ -0.4
CXCL12-205ENST00000395794 SLU7O95391 586 aaKnown RBP12.56□□□□□ -0.4
CXCL12-205ENST00000395794 CT45A8P0DMV1 189 aa12.56□□□□□ -0.4
CXCL12-205ENST00000395794 CT45A9P0DMV2 189 aa12.56□□□□□ -0.4
CXCL12-205ENST00000395794 CORO7P57737 925 aa12.56□□□□□ -0.4
CXCL12-205ENST00000395794 PCLAFQ15004 111 aa12.56□□□□□ -0.4
CXCL12-205ENST00000395794 ZNHIT3Q15649 155 aaPredicted RBP12.56□□□□□ -0.4
CXCL12-205ENST00000395794 CEBPEQ15744 281 aa12.56□□□□□ -0.4
CXCL12-205ENST00000395794 HSPB2Q16082 182 aa12.56□□□□□ -0.4
CXCL12-205ENST00000395794 CT45A2Q5DJT8 189 aa12.56□□□□□ -0.4
CXCL12-205ENST00000395794 RTL6Q6ICC9 239 aa12.56□□□□□ -0.4
CXCL12-205ENST00000395794 LARP4Q71RC2 724 aaKnown RBP eCLIP12.56□□□□□ -0.4
CXCL12-205ENST00000395794 TRABD2AQ86V40 505 aa12.56□□□□□ -0.4
CXCL12-205ENST00000395794 LURAP1LQ8IV03 231 aa12.56□□□□□ -0.4
CXCL12-205ENST00000395794 SLC44A2Q8IWA5 706 aaPredicted RBP12.56□□□□□ -0.4
CXCL12-205ENST00000395794 DDIASQ8IXT1 998 aa12.56□□□□□ -0.4
CXCL12-205ENST00000395794 BANPQ8N9N5 519 aa12.56□□□□□ -0.4
CXCL12-205ENST00000395794 OR7G2Q8NG99 324 aa12.56□□□□□ -0.4
CXCL12-205ENST00000395794 VSTM2LQ96N03 204 aa12.56□□□□□ -0.4
CXCL12-205ENST00000395794 FAM111AQ96PZ2 611 aa12.56□□□□□ -0.4
CXCL12-205ENST00000395794 NODALQ96S42 347 aa12.56□□□□□ -0.4
CXCL12-205ENST00000395794 TIMP4Q99727 224 aa12.56□□□□□ -0.4
CXCL12-205ENST00000395794 TRIM8Q9BZR9 551 aa12.56□□□□□ -0.4
CXCL12-205ENST00000395794 UBQLN3Q9H347 655 aa12.56□□□□□ -0.4
CXCL12-205ENST00000395794 ANKRA2Q9H9E1 313 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms