RNA–Protein interactions for RNA: ENST00000395303.7

HLA-DMA-202, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

BASIC

Gene HLA-DMA, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-202ENST00000395303 A0A1B0GUH1 482 aa12.27□□□□□ -0.45
HLA-DMA-202ENST00000395303 ATP6AP2A0A1C7CYW4 349 aa12.27□□□□□ -0.45
HLA-DMA-202ENST00000395303 TP53I11O14683 189 aa12.27□□□□□ -0.45
HLA-DMA-202ENST00000395303 TFECO14948 347 aaPredicted RBP12.27□□□□□ -0.45
HLA-DMA-202ENST00000395303 SCAMP2O15127 329 aaKnown RBP12.27□□□□□ -0.45
HLA-DMA-202ENST00000395303 PDPK1O15530 556 aa12.27□□□□□ -0.45
HLA-DMA-202ENST00000395303 HS6ST1O60243 411 aa12.27□□□□□ -0.45
HLA-DMA-202ENST00000395303 COQ9O75208 318 aa12.27□□□□□ -0.45
HLA-DMA-202ENST00000395303 SNNO75324 88 aaPredicted RBP12.27□□□□□ -0.45
HLA-DMA-202ENST00000395303 PPM1BO75688 479 aa12.27□□□□□ -0.45
HLA-DMA-202ENST00000395303 ATP6AP2O75787 350 aa12.27□□□□□ -0.45
HLA-DMA-202ENST00000395303 IGHG3P01860 377 aa12.27□□□□□ -0.45
HLA-DMA-202ENST00000395303 ABCB1P08183 1280 aaPredicted RBP12.27□□□□□ -0.45
HLA-DMA-202ENST00000395303 PIGAP37287 484 aa12.27□□□□□ -0.45
HLA-DMA-202ENST00000395303 RFC3P40938 356 aa12.27□□□□□ -0.45
HLA-DMA-202ENST00000395303 CA7P43166 264 aa12.27□□□□□ -0.45
HLA-DMA-202ENST00000395303 DNASE1L1P49184 302 aa12.27□□□□□ -0.45
HLA-DMA-202ENST00000395303 FBXW4P57775 412 aa12.27□□□□□ -0.45
HLA-DMA-202ENST00000395303 C21orf58P58505 322 aa12.27□□□□□ -0.45
HLA-DMA-202ENST00000395303 MAD2L1Q13257 205 aaPredicted RBP12.27□□□□□ -0.45
HLA-DMA-202ENST00000395303 MLC1Q15049 377 aa12.27□□□□□ -0.45
HLA-DMA-202ENST00000395303 CMPK2Q5EBM0 449 aa12.27□□□□□ -0.45
HLA-DMA-202ENST00000395303 TMEM64Q6YI46 380 aa12.27□□□□□ -0.45
HLA-DMA-202ENST00000395303 FAM47EQ6ZV65 393 aa12.27□□□□□ -0.45
HLA-DMA-202ENST00000395303 R3HCC1LQ7Z5L2 792 aaKnown RBP12.27□□□□□ -0.45
HLA-DMA-202ENST00000395303 SLC22A16Q86VW1 577 aa12.27□□□□□ -0.45
HLA-DMA-202ENST00000395303 RIMKLAQ8IXN7 391 aa12.27□□□□□ -0.45
HLA-DMA-202ENST00000395303 SLC34A3Q8N130 599 aa12.27□□□□□ -0.45
HLA-DMA-202ENST00000395303 LIX1Q8N485 282 aa12.27□□□□□ -0.45
HLA-DMA-202ENST00000395303 FAM13CQ8NE31 585 aa12.27□□□□□ -0.45
HLA-DMA-202ENST00000395303 OR52N2Q8NGI0 321 aa12.27□□□□□ -0.45
HLA-DMA-202ENST00000395303 HOXB13Q92826 284 aaPredicted RBP12.27□□□□□ -0.45
HLA-DMA-202ENST00000395303 HGDQ93099 445 aa12.27□□□□□ -0.45
HLA-DMA-202ENST00000395303 GFM2Q969S9 779 aaKnown RBP12.27□□□□□ -0.45
HLA-DMA-202ENST00000395303 ARL8AQ96BM9 186 aa12.27□□□□□ -0.45
HLA-DMA-202ENST00000395303 PPCDCQ96CD2 204 aa12.27□□□□□ -0.45
HLA-DMA-202ENST00000395303 ELP4Q96EB1 424 aa12.27□□□□□ -0.45
HLA-DMA-202ENST00000395303 SH3GL2Q99962 352 aa12.27□□□□□ -0.45
HLA-DMA-202ENST00000395303 TSPAN10Q9H1Z9 355 aaPredicted RBP12.27□□□□□ -0.45
HLA-DMA-202ENST00000395303 VIPAS39Q9H9C1 493 aa12.27□□□□□ -0.45
HLA-DMA-202ENST00000395303 TUBA8Q9NY65 449 aaPredicted RBP12.27□□□□□ -0.45
HLA-DMA-202ENST00000395303 TAS2R9Q9NYW1 312 aa12.27□□□□□ -0.45
HLA-DMA-202ENST00000395303 NTMQ9P121 344 aa12.27□□□□□ -0.45
HLA-DMA-202ENST00000395303 A0A1B0GVC2 190 aa12.26□□□□□ -0.45
HLA-DMA-202ENST00000395303 ACOT7O00154 380 aa12.26□□□□□ -0.45
HLA-DMA-202ENST00000395303 UPK1AO00322 258 aa12.26□□□□□ -0.45
HLA-DMA-202ENST00000395303 AKAP10O43572 662 aa12.26□□□□□ -0.45
HLA-DMA-202ENST00000395303 TSPAN2O60636 221 aa12.26□□□□□ -0.45
HLA-DMA-202ENST00000395303 SLC19A2O60779 497 aa12.26□□□□□ -0.45
HLA-DMA-202ENST00000395303 TRIM3O75382 744 aaPredicted RBP12.26□□□□□ -0.45
HLA-DMA-202ENST00000395303 ERN1O75460 977 aaKnown RBP12.26□□□□□ -0.45
HLA-DMA-202ENST00000395303 CLDN1O95832 211 aa12.26□□□□□ -0.45
HLA-DMA-202ENST00000395303 DDX5P17844 614 aaKnown RBP12.26□□□□□ -0.45
HLA-DMA-202ENST00000395303 RPL3P39023 403 aaKnown RBP12.26□□□□□ -0.45
HLA-DMA-202ENST00000395303 MC3RP41968 323 aa12.26□□□□□ -0.45
HLA-DMA-202ENST00000395303 PPIAP62937 165 aaKnown RBP12.26□□□□□ -0.45
HLA-DMA-202ENST00000395303 EMX2Q04743 252 aa12.26□□□□□ -0.45
HLA-DMA-202ENST00000395303 IL23RQ5VWK5 629 aa12.26□□□□□ -0.45
HLA-DMA-202ENST00000395303 NPSR1Q6W5P4 371 aa12.26□□□□□ -0.45
HLA-DMA-202ENST00000395303 ZNF551Q7Z340 670 aaPredicted RBP12.26□□□□□ -0.45
HLA-DMA-202ENST00000395303 NUP54Q7Z3B4 507 aa12.26□□□□□ -0.45
HLA-DMA-202ENST00000395303 FGD2Q7Z6J4 655 aa12.26□□□□□ -0.45
HLA-DMA-202ENST00000395303 SPPL2CQ8IUH8 684 aa12.26□□□□□ -0.45
HLA-DMA-202ENST00000395303 TRIM42Q8IWZ5 723 aa12.26□□□□□ -0.45
HLA-DMA-202ENST00000395303 TMEM251Q8N6I4 163 aa12.26□□□□□ -0.45
HLA-DMA-202ENST00000395303 FNDC5Q8NAU1 212 aa12.26□□□□□ -0.45
HLA-DMA-202ENST00000395303 CLHC1Q8NHS4 586 aa12.26□□□□□ -0.45
HLA-DMA-202ENST00000395303 ZFP28Q8NHY6 868 aa12.26□□□□□ -0.45
HLA-DMA-202ENST00000395303 RNF138Q8WVD3 245 aa12.26□□□□□ -0.45
HLA-DMA-202ENST00000395303 CIDECQ96AQ7 238 aaPredicted RBP12.26□□□□□ -0.45
HLA-DMA-202ENST00000395303 TUBGCP3Q96CW5 907 aa12.26□□□□□ -0.45
HLA-DMA-202ENST00000395303 OMA1Q96E52 524 aa12.26□□□□□ -0.45
HLA-DMA-202ENST00000395303 ZBED6CLQ96FA7 236 aaPredicted RBP12.26□□□□□ -0.45
HLA-DMA-202ENST00000395303 SLC35A4Q96G79 324 aa12.26□□□□□ -0.45
HLA-DMA-202ENST00000395303 PAIP2Q9BPZ3 127 aaKnown RBP12.26□□□□□ -0.45
HLA-DMA-202ENST00000395303 ANGPTL4Q9BY76 406 aa12.26□□□□□ -0.45
HLA-DMA-202ENST00000395303 MEAF6Q9HAF1 191 aa12.26□□□□□ -0.45
HLA-DMA-202ENST00000395303 THAP1Q9NVV9 213 aa12.26□□□□□ -0.45
HLA-DMA-202ENST00000395303 QPCTLQ9NXS2 382 aa12.26□□□□□ -0.45
HLA-DMA-202ENST00000395303 NKIRAS1Q9NYS0 192 aa12.26□□□□□ -0.45
HLA-DMA-202ENST00000395303 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.26□□□□□ -0.45
HLA-DMA-202ENST00000395303 TEP1Q99973 2627 aaKnown RBP12.26□□□□□ -0.45
HLA-DMA-202ENST00000395303 OR6C70A6NIJ9 312 aa12.25□□□□□ -0.45
HLA-DMA-202ENST00000395303 LRRC3CA6NJW4 275 aa12.25□□□□□ -0.45
HLA-DMA-202ENST00000395303 TTC36A6NLP5 189 aa12.25□□□□□ -0.45
HLA-DMA-202ENST00000395303 G3V3Y1 287 aa12.25□□□□□ -0.45
HLA-DMA-202ENST00000395303 KLF11O14901 512 aa12.25□□□□□ -0.45
HLA-DMA-202ENST00000395303 LRATO95237 230 aa12.25□□□□□ -0.45
HLA-DMA-202ENST00000395303 COL8A1P27658 744 aa12.25□□□□□ -0.45
HLA-DMA-202ENST00000395303 HPCAL1P37235 193 aa12.25□□□□□ -0.45
HLA-DMA-202ENST00000395303 MAP3K8P41279 467 aa12.25□□□□□ -0.45
HLA-DMA-202ENST00000395303 CASP3P42574 277 aa12.25□□□□□ -0.45
HLA-DMA-202ENST00000395303 CLDN8P56748 225 aa12.25□□□□□ -0.45
HLA-DMA-202ENST00000395303 RPP38P78345 283 aaKnown RBP12.25□□□□□ -0.45
HLA-DMA-202ENST00000395303 PSG6Q00889 435 aa12.25□□□□□ -0.45
HLA-DMA-202ENST00000395303 OCRLQ01968 901 aa12.25□□□□□ -0.45
HLA-DMA-202ENST00000395303 PLGLB1Q02325 96 aa12.25□□□□□ -0.45
HLA-DMA-202ENST00000395303 PTGR1Q14914 329 aa12.25□□□□□ -0.45
HLA-DMA-202ENST00000395303 PDCD2Q16342 344 aaPredicted RBP12.25□□□□□ -0.45
HLA-DMA-202ENST00000395303 NNATQ16517 81 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms