RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 GLIPR2Q9H4G4 154 aa17.28■□□□□ 0.36
PCDHA1-202ENST00000394633 ACSS1Q9NUB1 689 aaPredicted RBP17.28■□□□□ 0.36
PCDHA1-202ENST00000394633 AGRPO00253 132 aa17.27■□□□□ 0.36
PCDHA1-202ENST00000394633 ERGP11308 486 aa17.27■□□□□ 0.36
PCDHA1-202ENST00000394633 CD79BP40259 229 aa17.27■□□□□ 0.36
PCDHA1-202ENST00000394633 FABP5Q01469 135 aa17.27■□□□□ 0.36
PCDHA1-202ENST00000394633 Q5BKY6 102 aa17.27■□□□□ 0.36
PCDHA1-202ENST00000394633 FAM78AQ5JUQ0 283 aa17.27■□□□□ 0.36
PCDHA1-202ENST00000394633 ZNF765Q7L2R6 523 aa17.27■□□□□ 0.36
PCDHA1-202ENST00000394633 ZNF438Q7Z4V0 828 aa17.27■□□□□ 0.36
PCDHA1-202ENST00000394633 UBE3DQ7Z6J8 389 aa17.27■□□□□ 0.36
PCDHA1-202ENST00000394633 NUDT13Q86X67 352 aa17.27■□□□□ 0.36
PCDHA1-202ENST00000394633 DCUN1D3Q8IWE4 304 aa17.27■□□□□ 0.36
PCDHA1-202ENST00000394633 TMEM163Q8TC26 289 aa17.27■□□□□ 0.36
PCDHA1-202ENST00000394633 ZFYVE19Q96K21 471 aa17.27■□□□□ 0.36
PCDHA1-202ENST00000394633 FRMD6Q96NE9 622 aa17.27■□□□□ 0.36
PCDHA1-202ENST00000394633 ANKRA2Q9H9E1 313 aa17.27■□□□□ 0.36
PCDHA1-202ENST00000394633 MARK1Q9P0L2 795 aa17.27■□□□□ 0.36
PCDHA1-202ENST00000394633 NDRG2Q9UN36 371 aaKnown RBP17.27■□□□□ 0.36
PCDHA1-202ENST00000394633 GPR34Q9UPC5 381 aa17.27■□□□□ 0.36
PCDHA1-202ENST00000394633 TMEM98Q9Y2Y6 226 aa17.27■□□□□ 0.36
PCDHA1-202ENST00000394633 A0A0G2JN53 185 aa17.27■□□□□ 0.35
PCDHA1-202ENST00000394633 H7BY64 318 aa17.27■□□□□ 0.35
PCDHA1-202ENST00000394633 SLC30A4O14863 429 aa17.27■□□□□ 0.35
PCDHA1-202ENST00000394633 NDUFS4O43181 175 aa17.27■□□□□ 0.35
PCDHA1-202ENST00000394633 PRODHO43272 600 aa17.27■□□□□ 0.35
PCDHA1-202ENST00000394633 YES1P07947 543 aa17.27■□□□□ 0.35
PCDHA1-202ENST00000394633 REEP5Q00765 189 aa17.27■□□□□ 0.35
PCDHA1-202ENST00000394633 DLX2Q07687 328 aaPredicted RBP17.27■□□□□ 0.35
PCDHA1-202ENST00000394633 RAB40BQ12829 278 aa17.27■□□□□ 0.35
PCDHA1-202ENST00000394633 CHRDL2Q6WN34 429 aa17.27■□□□□ 0.35
PCDHA1-202ENST00000394633 SHFQ7M4L6 423 aa17.27■□□□□ 0.35
PCDHA1-202ENST00000394633 TRIM48Q8IWZ4 208 aa17.27■□□□□ 0.35
PCDHA1-202ENST00000394633 LINC00471Q8N535 108 aa17.27■□□□□ 0.35
PCDHA1-202ENST00000394633 ATP6V1C2Q8NEY4 427 aa17.27■□□□□ 0.35
PCDHA1-202ENST00000394633 TFGQ92734 400 aaPredicted RBP17.27■□□□□ 0.35
PCDHA1-202ENST00000394633 ZNF764Q96H86 408 aaPredicted RBP17.27■□□□□ 0.35
PCDHA1-202ENST00000394633 PRRC1Q96M27 445 aa17.27■□□□□ 0.35
PCDHA1-202ENST00000394633 PRAP1Q96NZ9 151 aa17.27■□□□□ 0.35
PCDHA1-202ENST00000394633 QRFPRQ96P65 431 aa17.27■□□□□ 0.35
PCDHA1-202ENST00000394633 RMI1Q9H9A7 625 aa17.27■□□□□ 0.35
PCDHA1-202ENST00000394633 ISYNA1Q9NPH2 558 aa17.27■□□□□ 0.35
PCDHA1-202ENST00000394633 WASH6PQ9NQA3 447 aa17.27■□□□□ 0.35
PCDHA1-202ENST00000394633 SLC9A8Q9Y2E8 581 aa17.27■□□□□ 0.35
PCDHA1-202ENST00000394633 GPR52Q9Y2T5 361 aa17.27■□□□□ 0.35
PCDHA1-202ENST00000394633 MYO10Q9HD67 2058 aa17.26■□□□□ 0.35
PCDHA1-202ENST00000394633 WASHC1A8K0Z3 465 aa17.26■□□□□ 0.35
PCDHA1-202ENST00000394633 CHRM4P08173 479 aa17.26■□□□□ 0.35
PCDHA1-202ENST00000394633 APEX1P27695 318 aaKnown RBP17.26■□□□□ 0.35
PCDHA1-202ENST00000394633 PPP2R1BP30154 601 aa17.26■□□□□ 0.35
PCDHA1-202ENST00000394633 BMP8BP34820 402 aa17.26■□□□□ 0.35
PCDHA1-202ENST00000394633 MLLT3P42568 568 aaPredicted RBP17.26■□□□□ 0.35
PCDHA1-202ENST00000394633 SLC6A11P48066 632 aa17.26■□□□□ 0.35
PCDHA1-202ENST00000394633 DMPKQ09013 629 aa17.26■□□□□ 0.35
PCDHA1-202ENST00000394633 FUT5Q11128 374 aa17.26■□□□□ 0.35
PCDHA1-202ENST00000394633 MLC1Q15049 377 aa17.26■□□□□ 0.35
PCDHA1-202ENST00000394633 WASH2PQ6VEQ5 465 aa17.26■□□□□ 0.35
PCDHA1-202ENST00000394633 SLC36A4Q6YBV0 504 aa17.26■□□□□ 0.35
PCDHA1-202ENST00000394633 ZFP41Q8N8Y5 198 aa17.26■□□□□ 0.35
PCDHA1-202ENST00000394633 TP53I13Q8NBR0 393 aaPredicted RBP17.26■□□□□ 0.35
PCDHA1-202ENST00000394633 OR8D4Q8NGM9 314 aa17.26■□□□□ 0.35
PCDHA1-202ENST00000394633 SLC9A6Q92581 669 aa17.26■□□□□ 0.35
PCDHA1-202ENST00000394633 UFD1Q92890 307 aa17.26■□□□□ 0.35
PCDHA1-202ENST00000394633 ASB16Q96NS5 453 aa17.26■□□□□ 0.35
PCDHA1-202ENST00000394633 SAP130Q9H0E3 1048 aa17.26■□□□□ 0.35
PCDHA1-202ENST00000394633 MAU2Q9Y6X3 613 aa17.26■□□□□ 0.35
PCDHA1-202ENST00000394633 PPM1DO15297 605 aa17.25■□□□□ 0.35
PCDHA1-202ENST00000394633 LZTS3O60299 673 aaPredicted RBP17.25■□□□□ 0.35
PCDHA1-202ENST00000394633 LIMS3P0CW19 117 aa17.25■□□□□ 0.35
PCDHA1-202ENST00000394633 LIMS4P0CW20 117 aa17.25■□□□□ 0.35
PCDHA1-202ENST00000394633 PTGER1P34995 402 aa17.25■□□□□ 0.35
PCDHA1-202ENST00000394633 MAN2A2P49641 1150 aa17.25■□□□□ 0.35
PCDHA1-202ENST00000394633 CCR8P51685 355 aa17.25■□□□□ 0.35
PCDHA1-202ENST00000394633 CD83Q01151 205 aa17.25■□□□□ 0.35
PCDHA1-202ENST00000394633 UBASH3BQ8TF42 649 aa17.25■□□□□ 0.35
PCDHA1-202ENST00000394633 RGMAQ96B86 450 aa17.25■□□□□ 0.35
PCDHA1-202ENST00000394633 AMDHD1Q96NU7 426 aa17.25■□□□□ 0.35
PCDHA1-202ENST00000394633 CDCA3Q99618 268 aaPredicted RBP17.25■□□□□ 0.35
PCDHA1-202ENST00000394633 ZCCHC3Q9NUD5 404 aaKnown RBP17.25■□□□□ 0.35
PCDHA1-202ENST00000394633 SLC23A2Q9UGH3 650 aa17.25■□□□□ 0.35
PCDHA1-202ENST00000394633 CISD3P0C7P0 127 aa17.25■□□□□ 0.35
PCDHA1-202ENST00000394633 GABRA5P31644 462 aa17.25■□□□□ 0.35
PCDHA1-202ENST00000394633 SOX18P35713 384 aa17.25■□□□□ 0.35
PCDHA1-202ENST00000394633 DPTQ07507 201 aa17.25■□□□□ 0.35
PCDHA1-202ENST00000394633 QPRTQ15274 297 aa17.25■□□□□ 0.35
PCDHA1-202ENST00000394633 GPR19Q15760 415 aa17.25■□□□□ 0.35
PCDHA1-202ENST00000394633 MINDY4Q4G0A6 757 aa17.25■□□□□ 0.35
PCDHA1-202ENST00000394633 YIF1BQ5BJH7 314 aa17.25■□□□□ 0.35
PCDHA1-202ENST00000394633 LCN1P1Q5VSP4 162 aa17.25■□□□□ 0.35
PCDHA1-202ENST00000394633 MRGPREQ86SM8 312 aa17.25■□□□□ 0.35
PCDHA1-202ENST00000394633 BBS10Q8TAM1 723 aa17.25■□□□□ 0.35
PCDHA1-202ENST00000394633 ENKURQ8TC29 256 aa17.25■□□□□ 0.35
PCDHA1-202ENST00000394633 AP3S1Q92572 193 aa17.25■□□□□ 0.35
PCDHA1-202ENST00000394633 YIPF4Q9BSR8 244 aa17.25■□□□□ 0.35
PCDHA1-202ENST00000394633 PRR14Q9BWN1 585 aa17.25■□□□□ 0.35
PCDHA1-202ENST00000394633 SLA2Q9H6Q3 261 aa17.25■□□□□ 0.35
PCDHA1-202ENST00000394633 COMMD3Q9UBI1 195 aa17.25■□□□□ 0.35
PCDHA1-202ENST00000394633 EXOSC1Q9Y3B2 195 aaKnown RBP17.25■□□□□ 0.35
PCDHA1-202ENST00000394633 IRGMA1A4Y4 181 aa17.24■□□□□ 0.35
PCDHA1-202ENST00000394633 OTOL1A6NHN0 477 aaPredicted RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms