RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 UQCRC2P22695 453 aa12.83□□□□□ -0.36
USP49-203ENST00000394253 NMBRP28336 390 aa12.83□□□□□ -0.36
USP49-203ENST00000394253 OR51T1Q8NGJ9 327 aa12.83□□□□□ -0.36
USP49-203ENST00000394253 OR6C2Q9NZP2 312 aa12.83□□□□□ -0.36
USP49-203ENST00000394253 SPATA31E1Q6ZUB1 1445 aa12.83□□□□□ -0.36
USP49-203ENST00000394253 MSTNO14793 375 aa12.83□□□□□ -0.36
USP49-203ENST00000394253 TRAF3IP2O43734 574 aaPredicted RBP12.83□□□□□ -0.36
USP49-203ENST00000394253 EPHX1P07099 455 aa12.83□□□□□ -0.36
USP49-203ENST00000394253 BMXP51813 675 aa12.83□□□□□ -0.36
USP49-203ENST00000394253 FAM74A1Q5RGS3 127 aa12.83□□□□□ -0.36
USP49-203ENST00000394253 KIAA0930Q6ICG6 404 aaPredicted RBP12.83□□□□□ -0.36
USP49-203ENST00000394253 NANOS1Q8WY41 292 aaKnown RBP12.83□□□□□ -0.36
USP49-203ENST00000394253 NMNAT2Q9BZQ4 307 aa12.83□□□□□ -0.36
USP49-203ENST00000394253 NT5DC2Q9H857 520 aa12.83□□□□□ -0.36
USP49-203ENST00000394253 FBXL4Q9UKA2 621 aa12.83□□□□□ -0.36
USP49-203ENST00000394253 LOC102723532A0A0G2JNH3 316 aa12.83□□□□□ -0.36
USP49-203ENST00000394253 YDJCA8MPS7 323 aa12.83□□□□□ -0.36
USP49-203ENST00000394253 MTNR1AP48039 350 aa12.83□□□□□ -0.36
USP49-203ENST00000394253 TEX26Q8N6G2 289 aa12.83□□□□□ -0.36
USP49-203ENST00000394253 BIRC7Q96CA5 298 aa12.83□□□□□ -0.36
USP49-203ENST00000394253 PELOQ9BRX2 385 aaKnown RBP12.83□□□□□ -0.36
USP49-203ENST00000394253 LIPT1Q9Y234 373 aa12.83□□□□□ -0.36
USP49-203ENST00000394253 MYO3AQ8NEV4 1616 aa12.83□□□□□ -0.36
USP49-203ENST00000394253 EPOP01588 193 aa12.82□□□□□ -0.36
USP49-203ENST00000394253 PAX6P26367 422 aa12.82□□□□□ -0.36
USP49-203ENST00000394253 FLI1Q01543 452 aaPredicted RBP12.82□□□□□ -0.36
USP49-203ENST00000394253 PMS2P3Q13401 168 aa12.82□□□□□ -0.36
USP49-203ENST00000394253 TRMT10BQ6PF06 316 aaKnown RBP12.82□□□□□ -0.36
USP49-203ENST00000394253 KDF1Q8NAX2 398 aaPredicted RBP12.82□□□□□ -0.36
USP49-203ENST00000394253 PRODH2Q9UF12 536 aa12.82□□□□□ -0.36
USP49-203ENST00000394253 ZIC2O95409 532 aaPredicted RBP12.82□□□□□ -0.36
USP49-203ENST00000394253 MMP12P39900 470 aa12.82□□□□□ -0.36
USP49-203ENST00000394253 MEP1BQ16820 701 aa12.82□□□□□ -0.36
USP49-203ENST00000394253 FBXL16Q8N461 479 aa12.82□□□□□ -0.36
USP49-203ENST00000394253 ENDOVQ8N8Q3 282 aaKnown RBP12.82□□□□□ -0.36
USP49-203ENST00000394253 OR8J1Q8NGP2 316 aa12.82□□□□□ -0.36
USP49-203ENST00000394253 OR13C9Q8NGT0 318 aa12.82□□□□□ -0.36
USP49-203ENST00000394253 PDGFRLQ15198 375 aa12.82□□□□□ -0.36
USP49-203ENST00000394253 ENPP7Q6UWV6 458 aa12.82□□□□□ -0.36
USP49-203ENST00000394253 DCP2Q8IU60 420 aaKnown RBP12.82□□□□□ -0.36
USP49-203ENST00000394253 IQGAP1P46940 1657 aa12.82□□□□□ -0.36
USP49-203ENST00000394253 CDHR4A6H8M9 788 aa12.82□□□□□ -0.36
USP49-203ENST00000394253 DVL2O14641 736 aa12.82□□□□□ -0.36
USP49-203ENST00000394253 TERTO14746 1132 aaKnown RBP12.82□□□□□ -0.36
USP49-203ENST00000394253 CELF2O95319 508 aaKnown RBP12.82□□□□□ -0.36
USP49-203ENST00000394253 TP53P04637 393 aaPredicted RBP12.82□□□□□ -0.36
USP49-203ENST00000394253 TNFSF4P23510 183 aa12.82□□□□□ -0.36
USP49-203ENST00000394253 SNTB1Q13884 538 aaKnown RBP12.82□□□□□ -0.36
USP49-203ENST00000394253 PPP2R2DQ66LE6 453 aa12.82□□□□□ -0.36
USP49-203ENST00000394253 OR52H1Q8NGJ2 320 aa12.82□□□□□ -0.36
USP49-203ENST00000394253 ZNF696Q9H7X3 374 aa12.82□□□□□ -0.36
USP49-203ENST00000394253 PRSS51A0A1B0GVH4 220 aa12.82□□□□□ -0.36
USP49-203ENST00000394253 PPP5D1E7EU14 171 aa12.82□□□□□ -0.36
USP49-203ENST00000394253 GAPDHSO14556 408 aaPredicted RBP12.82□□□□□ -0.36
USP49-203ENST00000394253 SLC31A2O15432 143 aa12.82□□□□□ -0.36
USP49-203ENST00000394253 OR2T1O43869 369 aa12.82□□□□□ -0.36
USP49-203ENST00000394253 HNRNPA3P51991 378 aaKnown RBP12.82□□□□□ -0.36
USP49-203ENST00000394253 FXYD4P59646 89 aa12.82□□□□□ -0.36
USP49-203ENST00000394253 BEX3Q00994 111 aa12.82□□□□□ -0.36
USP49-203ENST00000394253 OR52W1Q6IF63 320 aa12.82□□□□□ -0.36
USP49-203ENST00000394253 OPA3Q9H6K4 179 aa12.82□□□□□ -0.36
USP49-203ENST00000394253 SLC22A14Q9Y267 594 aa12.82□□□□□ -0.36
USP49-203ENST00000394253 STBD1O95210 358 aa12.82□□□□□ -0.36
USP49-203ENST00000394253 MT-ND4LP03901 98 aa12.82□□□□□ -0.36
USP49-203ENST00000394253 TK1P04183 234 aa12.82□□□□□ -0.36
USP49-203ENST00000394253 DHRS4L1P0CG22 281 aa12.82□□□□□ -0.36
USP49-203ENST00000394253 GABRA2P47869 451 aa12.82□□□□□ -0.36
USP49-203ENST00000394253 TAS2R40P59535 323 aa12.82□□□□□ -0.36
USP49-203ENST00000394253 GTF2BQ00403 316 aa12.82□□□□□ -0.36
USP49-203ENST00000394253 CRYZQ08257 329 aaKnown RBP12.82□□□□□ -0.36
USP49-203ENST00000394253 COL13A1Q5TAT6 717 aaPredicted RBP12.82□□□□□ -0.36
USP49-203ENST00000394253 C9orf57Q5W0N0 161 aa12.82□□□□□ -0.36
USP49-203ENST00000394253 FAM205BPQ63HN1 556 aa12.82□□□□□ -0.36
USP49-203ENST00000394253 ACO2Q99798 780 aaKnown RBP12.82□□□□□ -0.36
USP49-203ENST00000394253 ZDHHC3Q9NYG2 299 aa12.82□□□□□ -0.36
USP49-203ENST00000394253 PURGQ9UJV8 347 aaKnown RBP12.82□□□□□ -0.36
USP49-203ENST00000394253 YLPM1P49750 1951 aaKnown RBP12.82□□□□□ -0.36
USP49-203ENST00000394253 NCOR1O75376 2440 aa12.82□□□□□ -0.36
USP49-203ENST00000394253 TP53I11O14683 189 aa12.82□□□□□ -0.36
USP49-203ENST00000394253 SRPXP78539 464 aa12.82□□□□□ -0.36
USP49-203ENST00000394253 PROX2Q3B8N5 592 aa12.82□□□□□ -0.36
USP49-203ENST00000394253 TSTD2Q5T7W7 516 aa12.82□□□□□ -0.36
USP49-203ENST00000394253 ABHD11Q8NFV4 315 aa12.82□□□□□ -0.36
USP49-203ENST00000394253 PPP1R35Q8TAP8 253 aa12.82□□□□□ -0.36
USP49-203ENST00000394253 SEC22CQ9BRL7 303 aa12.82□□□□□ -0.36
USP49-203ENST00000394253 DVL1O14640 695 aa12.82□□□□□ -0.36
USP49-203ENST00000394253 PYCR1P32322 319 aa12.82□□□□□ -0.36
USP49-203ENST00000394253 DVL1P1P54792 670 aaPredicted RBP12.82□□□□□ -0.36
USP49-203ENST00000394253 PPP2CAP67775 309 aa12.82□□□□□ -0.36
USP49-203ENST00000394253 IL10RBQ08334 325 aa12.82□□□□□ -0.36
USP49-203ENST00000394253 GPR33Q49SQ1 333 aa12.82□□□□□ -0.36
USP49-203ENST00000394253 TRNP1Q6NT89 227 aa12.82□□□□□ -0.36
USP49-203ENST00000394253 HERVK_113Q902F9 699 aa12.82□□□□□ -0.36
USP49-203ENST00000394253 NIPAL2Q9H841 368 aa12.82□□□□□ -0.36
USP49-203ENST00000394253 ACSS2Q9NR19 701 aa12.82□□□□□ -0.36
USP49-203ENST00000394253 SACM1LQ9NTJ5 587 aa12.82□□□□□ -0.36
USP49-203ENST00000394253 PRELID3BQ9Y3B1 194 aa12.82□□□□□ -0.36
USP49-203ENST00000394253 CPN1P15169 458 aa12.81□□□□□ -0.36
USP49-203ENST00000394253 DRD5P21918 477 aa12.81□□□□□ -0.36
USP49-203ENST00000394253 GKP32189 559 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms