RNA–Protein interactions for RNA: ENST00000394106.6

CMTM4-202, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-202ENST00000394106 GPR55Q9Y2T6 319 aaPredicted RBP28.2■■■□□ 2.1
CMTM4-202ENST00000394106 PRSS44E7EML9 344 aa28.19■■■□□ 2.1
CMTM4-202ENST00000394106 ADAM10O14672 748 aa28.19■■■□□ 2.1
CMTM4-202ENST00000394106 TRIM3O75382 744 aaPredicted RBP28.19■■■□□ 2.1
CMTM4-202ENST00000394106 MC3RP41968 323 aa28.19■■■□□ 2.1
CMTM4-202ENST00000394106 CASP3P42574 277 aa28.19■■■□□ 2.1
CMTM4-202ENST00000394106 MASP1P48740 699 aa28.19■■■□□ 2.1
CMTM4-202ENST00000394106 MAN2A2P49641 1150 aa28.19■■■□□ 2.1
CMTM4-202ENST00000394106 CORO7P57737 925 aa28.19■■■□□ 2.1
CMTM4-202ENST00000394106 SLC34A3Q8N130 599 aa28.19■■■□□ 2.1
CMTM4-202ENST00000394106 BTBD9Q96Q07 612 aa28.19■■■□□ 2.1
CMTM4-202ENST00000394106 METTL7AQ9H8H3 244 aa28.19■■■□□ 2.1
CMTM4-202ENST00000394106 FOLH1BQ9HBA9 442 aa28.19■■■□□ 2.1
CMTM4-202ENST00000394106 KCNK9Q9NPC2 374 aa28.19■■■□□ 2.1
CMTM4-202ENST00000394106 TAS2R9Q9NYW1 312 aa28.19■■■□□ 2.1
CMTM4-202ENST00000394106 TNFRSF10DQ9UBN6 386 aa28.19■■■□□ 2.1
CMTM4-202ENST00000394106 GIMAP2Q9UG22 337 aa28.19■■■□□ 2.1
CMTM4-202ENST00000394106 BAIAP2L1Q9UHR4 511 aa28.19■■■□□ 2.1
CMTM4-202ENST00000394106 TMED5Q9Y3A6 229 aa28.19■■■□□ 2.1
CMTM4-202ENST00000394106 HRH3Q9Y5N1 445 aa28.19■■■□□ 2.1
CMTM4-202ENST00000394106 ERN1O75460 977 aaKnown RBP28.18■■■□□ 2.1
CMTM4-202ENST00000394106 SKAP2O75563 359 aaPredicted RBP28.18■■■□□ 2.1
CMTM4-202ENST00000394106 SNX4O95219 450 aa28.18■■■□□ 2.1
CMTM4-202ENST00000394106 GDF1P27539 372 aa28.18■■■□□ 2.1
CMTM4-202ENST00000394106 DCTP40126 519 aa28.18■■■□□ 2.1
CMTM4-202ENST00000394106 NUP54Q7Z3B4 507 aa28.18■■■□□ 2.1
CMTM4-202ENST00000394106 CROCCP2Q86T23 111 aa28.18■■■□□ 2.1
CMTM4-202ENST00000394106 PACS2Q86VP3 889 aa28.18■■■□□ 2.1
CMTM4-202ENST00000394106 OR5M9Q8NGP3 310 aa28.18■■■□□ 2.1
CMTM4-202ENST00000394106 OR6Y1Q8NGX8 325 aa28.18■■■□□ 2.1
CMTM4-202ENST00000394106 HGDQ93099 445 aa28.18■■■□□ 2.1
CMTM4-202ENST00000394106 TMBIM1Q969X1 311 aa28.18■■■□□ 2.1
CMTM4-202ENST00000394106 VSTM2LQ96N03 204 aa28.18■■■□□ 2.1
CMTM4-202ENST00000394106 AMDHD1Q96NU7 426 aa28.18■■■□□ 2.1
CMTM4-202ENST00000394106 DMRTA2Q96SC8 542 aa28.18■■■□□ 2.1
CMTM4-202ENST00000394106 STMN4Q9H169 189 aaPredicted RBP28.18■■■□□ 2.1
CMTM4-202ENST00000394106 TP63Q9H3D4 680 aaPredicted RBP28.18■■■□□ 2.1
CMTM4-202ENST00000394106 DNAJC13O75165 2243 aa28.17■■■□□ 2.1
CMTM4-202ENST00000394106 TRGV5A0A0B4J1U4 118 aa28.17■■■□□ 2.1
CMTM4-202ENST00000394106 TO15178 435 aa28.17■■■□□ 2.1
CMTM4-202ENST00000394106 COQ9O75208 318 aa28.17■■■□□ 2.1
CMTM4-202ENST00000394106 LYPLA1O75608 230 aaPredicted RBP28.17■■■□□ 2.1
CMTM4-202ENST00000394106 HSPA4LO95757 839 aa28.17■■■□□ 2.1
CMTM4-202ENST00000394106 MYZAPP0CAP1 466 aa28.17■■■□□ 2.1
CMTM4-202ENST00000394106 ZNF155Q12901 538 aaPredicted RBP28.17■■■□□ 2.1
CMTM4-202ENST00000394106 ART3Q13508 389 aa28.17■■■□□ 2.1
CMTM4-202ENST00000394106 CHI3L2Q15782 390 aa28.17■■■□□ 2.1
CMTM4-202ENST00000394106 XKRXQ6PP77 449 aa28.17■■■□□ 2.1
CMTM4-202ENST00000394106 PPCDCQ96CD2 204 aa28.17■■■□□ 2.1
CMTM4-202ENST00000394106 NODALQ96S42 347 aa28.17■■■□□ 2.1
CMTM4-202ENST00000394106 REEP4Q9H6H4 257 aa28.17■■■□□ 2.1
CMTM4-202ENST00000394106 PNPLA3Q9NST1 481 aa28.17■■■□□ 2.1
CMTM4-202ENST00000394106 NCOA6Q14686 2063 aaPredicted RBP28.16■■■□□ 2.1
CMTM4-202ENST00000394106 A0A1B0GVC2 190 aa28.16■■■□□ 2.1
CMTM4-202ENST00000394106 OR14I1A6ND48 311 aa28.16■■■□□ 2.1
CMTM4-202ENST00000394106 AQP7O14520 342 aa28.16■■■□□ 2.1
CMTM4-202ENST00000394106 TM9SF1O15321 606 aa28.16■■■□□ 2.1
CMTM4-202ENST00000394106 PDPK1O15530 556 aa28.16■■■□□ 2.1
CMTM4-202ENST00000394106 SUSD5O60279 629 aa28.16■■■□□ 2.1
CMTM4-202ENST00000394106 PEX11AO75192 247 aa28.16■■■□□ 2.1
CMTM4-202ENST00000394106 UGT2B11O75310 529 aa28.16■■■□□ 2.1
CMTM4-202ENST00000394106 REM1O75628 298 aa28.16■■■□□ 2.1
CMTM4-202ENST00000394106 SLITRK5O94991 958 aa28.16■■■□□ 2.1
CMTM4-202ENST00000394106 CT45A8P0DMV1 189 aa28.16■■■□□ 2.1
CMTM4-202ENST00000394106 CT45A9P0DMV2 189 aa28.16■■■□□ 2.1
CMTM4-202ENST00000394106 GXYLT1Q4G148 440 aa28.16■■■□□ 2.1
CMTM4-202ENST00000394106 CT45A2Q5DJT8 189 aa28.16■■■□□ 2.1
CMTM4-202ENST00000394106 XKR7Q5GH72 579 aa28.16■■■□□ 2.1
CMTM4-202ENST00000394106 EMC4Q5J8M3 183 aa28.16■■■□□ 2.1
CMTM4-202ENST00000394106 CES4AQ5XG92 561 aa28.16■■■□□ 2.1
CMTM4-202ENST00000394106 LRIG3Q6UXM1 1119 aa28.16■■■□□ 2.1
CMTM4-202ENST00000394106 NPSR1Q6W5P4 371 aa28.16■■■□□ 2.1
CMTM4-202ENST00000394106 SLC44A2Q8IWA5 706 aaPredicted RBP28.16■■■□□ 2.1
CMTM4-202ENST00000394106 PHF10Q8WUB8 498 aaKnown RBP28.16■■■□□ 2.1
CMTM4-202ENST00000394106 CIDECQ96AQ7 238 aaPredicted RBP28.16■■■□□ 2.1
CMTM4-202ENST00000394106 PPP3R2Q96LZ3 170 aa28.16■■■□□ 2.1
CMTM4-202ENST00000394106 SLC6A15Q9H2J7 730 aa28.16■■■□□ 2.1
CMTM4-202ENST00000394106 DDX18Q9NVP1 670 aaKnown RBP28.16■■■□□ 2.1
CMTM4-202ENST00000394106 A0A087WV62 115 aa28.15■■■□□ 2.1
CMTM4-202ENST00000394106 BCKDKO14874 412 aa28.15■■■□□ 2.1
CMTM4-202ENST00000394106 HCN1O60741 890 aa28.15■■■□□ 2.1
CMTM4-202ENST00000394106 ERLIN1O75477 346 aa28.15■■■□□ 2.1
CMTM4-202ENST00000394106 BCKDHAP12694 445 aa28.15■■■□□ 2.1
CMTM4-202ENST00000394106 TRPC1P48995 793 aa28.15■■■□□ 2.1
CMTM4-202ENST00000394106 HSPB3Q12988 150 aa28.15■■■□□ 2.1
CMTM4-202ENST00000394106 TNFAIP8L3Q5GJ75 292 aa28.15■■■□□ 2.1
CMTM4-202ENST00000394106 ZNF551Q7Z340 670 aaPredicted RBP28.15■■■□□ 2.1
CMTM4-202ENST00000394106 PGM2Q96G03 612 aa28.15■■■□□ 2.1
CMTM4-202ENST00000394106 C3orf30Q96M34 536 aa28.15■■■□□ 2.1
CMTM4-202ENST00000394106 COL21A1Q96P44 957 aa28.15■■■□□ 2.1
CMTM4-202ENST00000394106 QPCTLQ9NXS2 382 aa28.15■■■□□ 2.1
CMTM4-202ENST00000394106 KLRF1Q9NZS2 232 aa28.15■■■□□ 2.1
CMTM4-202ENST00000394106 SH3BP4Q9P0V3 963 aa28.15■■■□□ 2.1
CMTM4-202ENST00000394106 ACAD8Q9UKU7 415 aa28.15■■■□□ 2.1
CMTM4-202ENST00000394106 C19orf53Q9UNZ5 99 aaPredicted RBP28.15■■■□□ 2.1
CMTM4-202ENST00000394106 OR10H1Q9Y4A9 318 aa28.15■■■□□ 2.1
CMTM4-202ENST00000394106 PCNX1Q96RV3 2341 aa28.14■■■□□ 2.1
CMTM4-202ENST00000394106 GNB5O14775 395 aa28.14■■■□□ 2.1
CMTM4-202ENST00000394106 BIRC5O15392 142 aa28.14■■■□□ 2.1
CMTM4-202ENST00000394106 ITM2AO43736 263 aa28.14■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms