RNA–Protein interactions for RNA: ENST00000393965.7

CCDC142-202, Transcript of coiled-coil domain containing 142, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC142, Length 3,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC142-202ENST00000393965 RAB43Q86YS6 212 aa12.92□□□□□ -0.34
CCDC142-202ENST00000393965 TIGD4Q8IY51 512 aa12.92□□□□□ -0.34
CCDC142-202ENST00000393965 CCDC116Q8IYX3 515 aa12.92□□□□□ -0.34
CCDC142-202ENST00000393965 ENKURQ8TC29 256 aa12.92□□□□□ -0.34
CCDC142-202ENST00000393965 IPCEF1Q8WWN9 437 aaPredicted RBP12.92□□□□□ -0.34
CCDC142-202ENST00000393965 GEMIN6Q8WXD5 167 aaKnown RBP12.92□□□□□ -0.34
CCDC142-202ENST00000393965 SMURF1Q9HCE7 757 aa12.92□□□□□ -0.34
CCDC142-202ENST00000393965 RPRD1BQ9NQG5 326 aaKnown RBP12.92□□□□□ -0.34
CCDC142-202ENST00000393965 FBXO8Q9NRD0 319 aa12.92□□□□□ -0.34
CCDC142-202ENST00000393965 THSD1Q9NS62 852 aa12.92□□□□□ -0.34
CCDC142-202ENST00000393965 ENPP4Q9Y6X5 453 aa12.92□□□□□ -0.34
CCDC142-202ENST00000393965 FAM25AB3EWG3 89 aa12.92□□□□□ -0.34
CCDC142-202ENST00000393965 FAM25CB3EWG5 89 aa12.92□□□□□ -0.34
CCDC142-202ENST00000393965 FAM25GB3EWG6 89 aa12.92□□□□□ -0.34
CCDC142-202ENST00000393965 CBLP22681 906 aa12.92□□□□□ -0.34
CCDC142-202ENST00000393965 SNAPC1Q16533 368 aa12.92□□□□□ -0.34
CCDC142-202ENST00000393965 TMEM196Q5HYL7 178 aa12.92□□□□□ -0.34
CCDC142-202ENST00000393965 OR4C11Q6IEV9 310 aa12.92□□□□□ -0.34
CCDC142-202ENST00000393965 HOXD1Q9GZZ0 328 aa12.92□□□□□ -0.34
CCDC142-202ENST00000393965 SEC14L3Q9UDX4 400 aa12.92□□□□□ -0.34
CCDC142-202ENST00000393965 ANGPT4Q9Y264 503 aa12.92□□□□□ -0.34
CCDC142-202ENST00000393965 A0A0A6YYD5 115 aa12.91□□□□□ -0.34
CCDC142-202ENST00000393965 A0A1W2PQL4 384 aaPredicted RBP12.91□□□□□ -0.34
CCDC142-202ENST00000393965 A0A1W2PR48 441 aa12.91□□□□□ -0.34
CCDC142-202ENST00000393965 ERI3O43414 337 aaKnown RBP12.91□□□□□ -0.34
CCDC142-202ENST00000393965 SERPINI2O75830 405 aa12.91□□□□□ -0.34
CCDC142-202ENST00000393965 CCNYL3P0C7X3 344 aa12.91□□□□□ -0.34
CCDC142-202ENST00000393965 PSMA1P25786 263 aaKnown RBP12.91□□□□□ -0.34
CCDC142-202ENST00000393965 KIR2DL1P43626 348 aaPredicted RBP12.91□□□□□ -0.34
CCDC142-202ENST00000393965 CXCR4P61073 352 aa12.91□□□□□ -0.34
CCDC142-202ENST00000393965 ERVK-21P61565 698 aa12.91□□□□□ -0.34
CCDC142-202ENST00000393965 IL20RBQ6UXL0 311 aa12.91□□□□□ -0.34
CCDC142-202ENST00000393965 SMAP2Q8WU79 429 aaPredicted RBP12.91□□□□□ -0.34
CCDC142-202ENST00000393965 BTBD1Q9H0C5 482 aa12.91□□□□□ -0.34
CCDC142-202ENST00000393965 DPP7Q9UHL4 492 aa12.91□□□□□ -0.34
CCDC142-202ENST00000393965 NR2F1P10589 423 aa12.91□□□□□ -0.34
CCDC142-202ENST00000393965 SDC2P34741 201 aa12.91□□□□□ -0.34
CCDC142-202ENST00000393965 SRP54P61011 504 aaKnown RBP12.91□□□□□ -0.34
CCDC142-202ENST00000393965 PRDX1Q06830 199 aaKnown RBP12.91□□□□□ -0.34
CCDC142-202ENST00000393965 RBBP4Q09028 425 aa12.91□□□□□ -0.34
CCDC142-202ENST00000393965 RPA4Q13156 261 aa12.91□□□□□ -0.34
CCDC142-202ENST00000393965 NUDT13Q86X67 352 aa12.91□□□□□ -0.34
CCDC142-202ENST00000393965 KCT2Q8NC54 265 aa12.91□□□□□ -0.34
CCDC142-202ENST00000393965 BBS10Q8TAM1 723 aa12.91□□□□□ -0.34
CCDC142-202ENST00000393965 UBE2E3Q969T4 207 aa12.91□□□□□ -0.34
CCDC142-202ENST00000393965 CNRIP1Q96F85 164 aaPredicted RBP12.91□□□□□ -0.34
CCDC142-202ENST00000393965 GPA33Q99795 319 aa12.91□□□□□ -0.34
CCDC142-202ENST00000393965 TREX2Q9BQ50 279 aaPredicted RBP12.91□□□□□ -0.34
CCDC142-202ENST00000393965 TSSK6Q9BXA6 273 aa12.91□□□□□ -0.34
CCDC142-202ENST00000393965 SLC28A3Q9HAS3 691 aa12.91□□□□□ -0.34
CCDC142-202ENST00000393965 PELI2Q9HAT8 420 aa12.91□□□□□ -0.34
CCDC142-202ENST00000393965 PEX16Q9Y5Y5 336 aa12.91□□□□□ -0.34
CCDC142-202ENST00000393965 HSPE1-MOB4S4R3N1 261 aa12.91□□□□□ -0.34
CCDC142-202ENST00000393965 TBC1D3DA0A087WVF3 549 aa12.91□□□□□ -0.34
CCDC142-202ENST00000393965 TBC1D3IA0A087WXS9 549 aa12.91□□□□□ -0.34
CCDC142-202ENST00000393965 TBC1D3EA0A087X179 549 aa12.91□□□□□ -0.34
CCDC142-202ENST00000393965 TBC1D3KA0A087X1G2 549 aa12.91□□□□□ -0.34
CCDC142-202ENST00000393965 TBC1D3FA6NER0 549 aaPredicted RBP12.91□□□□□ -0.34
CCDC142-202ENST00000393965 CCDC182A6NF36 153 aa12.91□□□□□ -0.34
CCDC142-202ENST00000393965 TBC1D3LB9A6J9 549 aa12.91□□□□□ -0.34
CCDC142-202ENST00000393965 CASKO14936 926 aa12.91□□□□□ -0.34
CCDC142-202ENST00000393965 TBC1D3HP0C7X1 549 aa12.91□□□□□ -0.34
CCDC142-202ENST00000393965 APEX1P27695 318 aaKnown RBP12.91□□□□□ -0.34
CCDC142-202ENST00000393965 XKP51811 444 aa12.91□□□□□ -0.34
CCDC142-202ENST00000393965 NCBP2P52298 156 aaKnown RBP eCLIP12.91□□□□□ -0.34
CCDC142-202ENST00000393965 LTB4RQ15722 352 aa12.91□□□□□ -0.34
CCDC142-202ENST00000393965 TBC1D3GQ6DHY5 549 aa12.91□□□□□ -0.34
CCDC142-202ENST00000393965 TBC1D3CQ6IPX1 549 aa12.91□□□□□ -0.34
CCDC142-202ENST00000393965 IKBIPQ70UQ0 350 aa12.91□□□□□ -0.34
CCDC142-202ENST00000393965 RRM2BQ7LG56 351 aa12.91□□□□□ -0.34
CCDC142-202ENST00000393965 HOMEZQ8IX15 550 aa12.91□□□□□ -0.34
CCDC142-202ENST00000393965 TMEFF1Q8IYR6 380 aa12.91□□□□□ -0.34
CCDC142-202ENST00000393965 TBC1D3Q8IZP1 549 aaPredicted RBP12.91□□□□□ -0.34
CCDC142-202ENST00000393965 OR4E2Q8NGC2 313 aa12.91□□□□□ -0.34
CCDC142-202ENST00000393965 SUN3Q8TAQ9 357 aa12.91□□□□□ -0.34
CCDC142-202ENST00000393965 RAB7BQ96AH8 199 aa12.91□□□□□ -0.34
CCDC142-202ENST00000393965 RGMAQ96B86 450 aa12.91□□□□□ -0.34
CCDC142-202ENST00000393965 AMDHD1Q96NU7 426 aa12.91□□□□□ -0.34
CCDC142-202ENST00000393965 WACQ9BTA9 647 aa12.91□□□□□ -0.34
CCDC142-202ENST00000393965 HDHD2Q9H0R4 259 aa12.91□□□□□ -0.34
CCDC142-202ENST00000393965 FTSJ1Q9UET6 329 aa12.91□□□□□ -0.34
CCDC142-202ENST00000393965 APOBEC3BQ9UH17 382 aaKnown RBP12.91□□□□□ -0.34
CCDC142-202ENST00000393965 VPS13AQ96RL7 3174 aa12.91□□□□□ -0.34
CCDC142-202ENST00000393965 NOTOA8MTQ0 251 aa12.9□□□□□ -0.34
CCDC142-202ENST00000393965 FAM47E-STBD1D6RA91 191 aa12.9□□□□□ -0.34
CCDC142-202ENST00000393965 GSTM5P46439 218 aa12.9□□□□□ -0.34
CCDC142-202ENST00000393965 IL18Q14116 193 aa12.9□□□□□ -0.34
CCDC142-202ENST00000393965 KRT33BQ14525 404 aa12.9□□□□□ -0.34
CCDC142-202ENST00000393965 HEPACAMQ14CZ8 416 aa12.9□□□□□ -0.34
CCDC142-202ENST00000393965 SPHARQ15513 63 aa12.9□□□□□ -0.34
CCDC142-202ENST00000393965 FAM46CQ5VWP2 391 aa12.9□□□□□ -0.34
CCDC142-202ENST00000393965 TMEM107Q6UX40 140 aa12.9□□□□□ -0.34
CCDC142-202ENST00000393965 LYPD8Q6UX82 237 aa12.9□□□□□ -0.34
CCDC142-202ENST00000393965 OR5P2Q8WZ92 322 aa12.9□□□□□ -0.34
CCDC142-202ENST00000393965 SLC17A9Q9BYT1 436 aa12.9□□□□□ -0.34
CCDC142-202ENST00000393965 GDE1Q9NZC3 331 aa12.9□□□□□ -0.34
CCDC142-202ENST00000393965 CNIH4Q9P003 139 aa12.9□□□□□ -0.34
CCDC142-202ENST00000393965 NLKQ9UBE8 527 aa12.9□□□□□ -0.34
CCDC142-202ENST00000393965 TBC1D29Q9UFV1 150 aa12.9□□□□□ -0.34
CCDC142-202ENST00000393965 NTNG1Q9Y2I2 539 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms