RNA–Protein interactions for RNA: ENST00000392246.6

SUMO1-203, Transcript of small ubiquitin-like modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUMO1, Length 1,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-203ENST00000392246 CT45A9P0DMV2 189 aa13.79□□□□□ -0.2
SUMO1-203ENST00000392246 CD1EP15812 388 aa13.79□□□□□ -0.2
SUMO1-203ENST00000392246 CAPN3P20807 821 aa13.79□□□□□ -0.2
SUMO1-203ENST00000392246 CDKN2CP42773 168 aa13.79□□□□□ -0.2
SUMO1-203ENST00000392246 TRPC1P48995 793 aa13.79□□□□□ -0.2
SUMO1-203ENST00000392246 CYB561P49447 251 aa13.79□□□□□ -0.2
SUMO1-203ENST00000392246 HLCSP50747 726 aa13.79□□□□□ -0.2
SUMO1-203ENST00000392246 PSPHP78330 225 aa13.79□□□□□ -0.2
SUMO1-203ENST00000392246 TP53BP2Q13625 1128 aa13.79□□□□□ -0.2
SUMO1-203ENST00000392246 TUBA3CQ13748 450 aa13.79□□□□□ -0.2
SUMO1-203ENST00000392246 TLR1Q15399 786 aa13.79□□□□□ -0.2
SUMO1-203ENST00000392246 MAPRE2Q15555 327 aa13.79□□□□□ -0.2
SUMO1-203ENST00000392246 CT45A2Q5DJT8 189 aa13.79□□□□□ -0.2
SUMO1-203ENST00000392246 C6orf10Q5SRN2 563 aa13.79□□□□□ -0.2
SUMO1-203ENST00000392246 GKAP1Q5VSY0 366 aaPredicted RBP13.79□□□□□ -0.2
SUMO1-203ENST00000392246 TUBA3EQ6PEY2 450 aa13.79□□□□□ -0.2
SUMO1-203ENST00000392246 OPN5Q6U736 354 aa13.79□□□□□ -0.2
SUMO1-203ENST00000392246 C6orf120Q7Z4R8 191 aa13.79□□□□□ -0.2
SUMO1-203ENST00000392246 GPALPP1Q8IXQ4 340 aa13.79□□□□□ -0.2
SUMO1-203ENST00000392246 CDRT4Q8N9R6 151 aa13.79□□□□□ -0.2
SUMO1-203ENST00000392246 OR5AK3PQ8NH89 298 aa13.79□□□□□ -0.2
SUMO1-203ENST00000392246 GTF2H4Q92759 462 aa13.79□□□□□ -0.2
SUMO1-203ENST00000392246 LMF2Q9BU23 707 aaKnown RBP13.79□□□□□ -0.2
SUMO1-203ENST00000392246 NDUFAF1Q9Y375 327 aa13.79□□□□□ -0.2
SUMO1-203ENST00000392246 CAPN7Q9Y6W3 813 aa13.79□□□□□ -0.2
SUMO1-203ENST00000392246 A8MVJ9 347 aa13.78□□□□□ -0.2
SUMO1-203ENST00000392246 CAPN14A8MX76 684 aa13.78□□□□□ -0.2
SUMO1-203ENST00000392246 TO15178 435 aa13.78□□□□□ -0.2
SUMO1-203ENST00000392246 ATXN7O15265 892 aaPredicted RBP13.78□□□□□ -0.2
SUMO1-203ENST00000392246 ZNF354AO60765 605 aaPredicted RBP13.78□□□□□ -0.2
SUMO1-203ENST00000392246 SOX30O94993 753 aa13.78□□□□□ -0.2
SUMO1-203ENST00000392246 ANP32DO95626 131 aa13.78□□□□□ -0.2
SUMO1-203ENST00000392246 F10P00742 488 aa13.78□□□□□ -0.2
SUMO1-203ENST00000392246 HMGN2P05204 90 aaKnown RBP13.78□□□□□ -0.2
SUMO1-203ENST00000392246 ZCCHC18P0CG32 403 aa13.78□□□□□ -0.2
SUMO1-203ENST00000392246 CD96P40200 585 aa13.78□□□□□ -0.2
SUMO1-203ENST00000392246 SOX3P41225 446 aa13.78□□□□□ -0.2
SUMO1-203ENST00000392246 CORO7P57737 925 aa13.78□□□□□ -0.2
SUMO1-203ENST00000392246 PSG6Q00889 435 aa13.78□□□□□ -0.2
SUMO1-203ENST00000392246 OC90Q02509 493 aaPredicted RBP13.78□□□□□ -0.2
SUMO1-203ENST00000392246 LASP1Q14847 261 aaKnown RBP13.78□□□□□ -0.2
SUMO1-203ENST00000392246 NNATQ16517 81 aa13.78□□□□□ -0.2
SUMO1-203ENST00000392246 ZNF468Q5VIY5 522 aaPredicted RBP13.78□□□□□ -0.2
SUMO1-203ENST00000392246 MFSD12Q6NUT3 480 aa13.78□□□□□ -0.2
SUMO1-203ENST00000392246 SLC2A7Q6PXP3 512 aa13.78□□□□□ -0.2
SUMO1-203ENST00000392246 MTERF4Q7Z6M4 381 aaKnown RBP13.78□□□□□ -0.2
SUMO1-203ENST00000392246 SLC44A2Q8IWA5 706 aaPredicted RBP13.78□□□□□ -0.2
SUMO1-203ENST00000392246 DND1Q8IYX4 353 aaKnown RBP13.78□□□□□ -0.2
SUMO1-203ENST00000392246 HORMAD2Q8N7B1 307 aa13.78□□□□□ -0.2
SUMO1-203ENST00000392246 HOXB13Q92826 284 aaPredicted RBP13.78□□□□□ -0.2
SUMO1-203ENST00000392246 PHF12Q96QT6 1004 aa13.78□□□□□ -0.2
SUMO1-203ENST00000392246 SLC35A5Q9BS91 424 aa13.78□□□□□ -0.2
SUMO1-203ENST00000392246 ACTRT3Q9BYD9 372 aa13.78□□□□□ -0.2
SUMO1-203ENST00000392246 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.78□□□□□ -0.29e-11■■■■□ 24.6
SUMO1-203ENST00000392246 TRIM45Q9H8W5 580 aaPredicted RBP13.78□□□□□ -0.2
SUMO1-203ENST00000392246 GPATCH2Q9NW75 528 aa13.78□□□□□ -0.2
SUMO1-203ENST00000392246 HPF1Q9NWY4 346 aa13.78□□□□□ -0.2
SUMO1-203ENST00000392246 ANKRD10Q9NXR5 420 aa13.78□□□□□ -0.2
SUMO1-203ENST00000392246 LRFN1Q9P244 771 aa13.78□□□□□ -0.2
SUMO1-203ENST00000392246 ARMCX1Q9P291 453 aa13.78□□□□□ -0.2
SUMO1-203ENST00000392246 LEF1Q9UJU2 399 aaPredicted RBP13.78□□□□□ -0.2
SUMO1-203ENST00000392246 FAF1Q9UNN5 650 aaPredicted RBP13.78□□□□□ -0.2
SUMO1-203ENST00000392246 NPFFR2Q9Y5X5 522 aa13.78□□□□□ -0.2
SUMO1-203ENST00000392246 KMT2BQ9UMN6 2715 aaPredicted RBP13.78□□□□□ -0.2
SUMO1-203ENST00000392246 NBEAQ8NFP9 2946 aa13.77□□□□□ -0.2
SUMO1-203ENST00000392246 A0A096LPI6 279 aa13.77□□□□□ -0.21
SUMO1-203ENST00000392246 ASPDHA6ND91 283 aa13.77□□□□□ -0.21
SUMO1-203ENST00000392246 ANGPT2O15123 496 aa13.77□□□□□ -0.21
SUMO1-203ENST00000392246 OR6B1O95007 311 aa13.77□□□□□ -0.21
SUMO1-203ENST00000392246 GSNP06396 782 aa13.77□□□□□ -0.21
SUMO1-203ENST00000392246 KRT16P08779 473 aa13.77□□□□□ -0.21
SUMO1-203ENST00000392246 CHI3L1P36222 383 aaPredicted RBP13.77□□□□□ -0.21
SUMO1-203ENST00000392246 MAP3K8P41279 467 aa13.77□□□□□ -0.21
SUMO1-203ENST00000392246 ST13P50502 369 aaKnown RBP13.77□□□□□ -0.21
SUMO1-203ENST00000392246 TNFSF10P50591 281 aa13.77□□□□□ -0.21
SUMO1-203ENST00000392246 GAB1Q13480 694 aa13.77□□□□□ -0.21
SUMO1-203ENST00000392246 PAGE3Q5JUK9 113 aa13.77□□□□□ -0.21
SUMO1-203ENST00000392246 CDC73Q6P1J9 531 aa13.77□□□□□ -0.21
SUMO1-203ENST00000392246 IL20RBQ6UXL0 311 aa13.77□□□□□ -0.21
SUMO1-203ENST00000392246 NPSR1Q6W5P4 371 aa13.77□□□□□ -0.21
SUMO1-203ENST00000392246 WDR53Q7Z5U6 358 aaPredicted RBP13.77□□□□□ -0.21
SUMO1-203ENST00000392246 CLEC4FQ8N1N0 589 aa13.77□□□□□ -0.21
SUMO1-203ENST00000392246 RBMXL3Q8N7X1 1067 aaKnown RBP13.77□□□□□ -0.21
SUMO1-203ENST00000392246 ANKS4BQ8N8V4 417 aa13.77□□□□□ -0.21
SUMO1-203ENST00000392246 SLC9A6Q92581 669 aa13.77□□□□□ -0.21
SUMO1-203ENST00000392246 NEURL3Q96EH8 262 aa13.77□□□□□ -0.21
SUMO1-203ENST00000392246 C16orf58Q96GQ5 468 aa13.77□□□□□ -0.21
SUMO1-203ENST00000392246 YIPF4Q9BSR8 244 aa13.77□□□□□ -0.21
SUMO1-203ENST00000392246 CCDC106Q9BWC9 280 aa13.77□□□□□ -0.21
SUMO1-203ENST00000392246 MYLK2Q9H1R3 596 aa13.77□□□□□ -0.21
SUMO1-203ENST00000392246 Q9N2J8 555 aa13.77□□□□□ -0.21
SUMO1-203ENST00000392246 OR10H1Q9Y4A9 318 aa13.77□□□□□ -0.21
SUMO1-203ENST00000392246 PIEZO2Q9H5I5 2752 aa13.77□□□□□ -0.21
SUMO1-203ENST00000392246 DCTN3O75935 186 aa13.76□□□□□ -0.21
SUMO1-203ENST00000392246 NKX2-2O95096 273 aa13.76□□□□□ -0.21
SUMO1-203ENST00000392246 KCNH1O95259 989 aa13.76□□□□□ -0.21
SUMO1-203ENST00000392246 KRT75O95678 551 aa13.76□□□□□ -0.21
SUMO1-203ENST00000392246 ALOX5P09917 674 aa13.76□□□□□ -0.21
SUMO1-203ENST00000392246 FBXO45P0C2W1 286 aa13.76□□□□□ -0.21
SUMO1-203ENST00000392246 NAGAP17050 411 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms