RNA–Protein interactions for RNA: ENST00000391993.7

TRAF3IP1-202, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,003 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-202ENST00000391993 OR6K6Q8NGW6 343 aa16.1■□□□□ 0.17
TRAF3IP1-202ENST00000391993 RNF31Q96EP0 1072 aa16.1■□□□□ 0.17
TRAF3IP1-202ENST00000391993 MFFQ9GZY8 342 aa16.1■□□□□ 0.17
TRAF3IP1-202ENST00000391993 BTBD1Q9H0C5 482 aa16.1■□□□□ 0.17
TRAF3IP1-202ENST00000391993 RHBGQ9H310 441 aa16.1■□□□□ 0.17
TRAF3IP1-202ENST00000391993 SCP2D1Q9UJQ7 156 aa16.1■□□□□ 0.17
TRAF3IP1-202ENST00000391993 PCDHGA9Q9Y5G4 932 aaKnown RBP16.1■□□□□ 0.17
TRAF3IP1-202ENST00000391993 PRSS44E7EML9 344 aa16.1■□□□□ 0.17
TRAF3IP1-202ENST00000391993 SCAMP2O15127 329 aaKnown RBP16.1■□□□□ 0.17
TRAF3IP1-202ENST00000391993 CLDN11O75508 207 aa16.1■□□□□ 0.17
TRAF3IP1-202ENST00000391993 IGSF6O95976 241 aa16.1■□□□□ 0.17
TRAF3IP1-202ENST00000391993 RAB3AP20336 220 aa16.1■□□□□ 0.17
TRAF3IP1-202ENST00000391993 KLHDC9Q8NEP7 349 aa16.1■□□□□ 0.17
TRAF3IP1-202ENST00000391993 GMLQ99445 158 aa16.1■□□□□ 0.17
TRAF3IP1-202ENST00000391993 TDP1Q9NUW8 608 aa16.1■□□□□ 0.17
TRAF3IP1-202ENST00000391993 STON1Q9Y6Q2 735 aa16.1■□□□□ 0.17
TRAF3IP1-202ENST00000391993 A0A1B0GVI7 797 aa16.09■□□□□ 0.17
TRAF3IP1-202ENST00000391993 ANXA11P50995 505 aaKnown RBP16.09■□□□□ 0.17
TRAF3IP1-202ENST00000391993 PITPNAQ00169 270 aa16.09■□□□□ 0.17
TRAF3IP1-202ENST00000391993 CPOQ8IVL8 374 aa16.09■□□□□ 0.17
TRAF3IP1-202ENST00000391993 BTBD2Q9BX70 525 aa16.09■□□□□ 0.17
TRAF3IP1-202ENST00000391993 MED20Q9H944 212 aa16.09■□□□□ 0.17
TRAF3IP1-202ENST00000391993 CHMP1AQ9HD42 196 aaPredicted RBP16.09■□□□□ 0.17
TRAF3IP1-202ENST00000391993 B3GAT2Q9NPZ5 323 aa16.09■□□□□ 0.17
TRAF3IP1-202ENST00000391993 PLCXD1Q9NUJ7 323 aa16.09■□□□□ 0.17
TRAF3IP1-202ENST00000391993 CFAP97Q9P2B7 532 aa16.09■□□□□ 0.17
TRAF3IP1-202ENST00000391993 TRAPPC4Q9Y296 219 aa16.09■□□□□ 0.17
TRAF3IP1-202ENST00000391993 IRGMA1A4Y4 181 aa16.09■□□□□ 0.17
TRAF3IP1-202ENST00000391993 ZFP36L2P47974 494 aaKnown RBP16.09■□□□□ 0.17
TRAF3IP1-202ENST00000391993 LSRQ86X29 649 aaPredicted RBP16.09■□□□□ 0.17
TRAF3IP1-202ENST00000391993 OR5D16Q8NGK9 328 aa16.09■□□□□ 0.17
TRAF3IP1-202ENST00000391993 PITX2Q99697 317 aa16.09■□□□□ 0.17
TRAF3IP1-202ENST00000391993 IFT22Q9H7X7 185 aa16.09■□□□□ 0.17
TRAF3IP1-202ENST00000391993 TRIM36Q9NQ86 728 aa16.09■□□□□ 0.17
TRAF3IP1-202ENST00000391993 GOSR2O14653 212 aa16.09■□□□□ 0.17
TRAF3IP1-202ENST00000391993 RASGRP1O95267 797 aa16.09■□□□□ 0.17
TRAF3IP1-202ENST00000391993 OR10A3P58181 314 aa16.09■□□□□ 0.17
TRAF3IP1-202ENST00000391993 DGCR2P98153 550 aa16.09■□□□□ 0.17
TRAF3IP1-202ENST00000391993 PAN3Q58A45 887 aaKnown RBP16.09■□□□□ 0.17
TRAF3IP1-202ENST00000391993 HECTD3Q5T447 861 aa16.09■□□□□ 0.17
TRAF3IP1-202ENST00000391993 PRPF38BQ5VTL8 546 aaKnown RBP16.09■□□□□ 0.17
TRAF3IP1-202ENST00000391993 TIGD3Q6B0B8 471 aa16.09■□□□□ 0.17
TRAF3IP1-202ENST00000391993 CASTOR1Q8WTX7 329 aa16.09■□□□□ 0.17
TRAF3IP1-202ENST00000391993 MARC2Q969Z3 335 aa16.09■□□□□ 0.17
TRAF3IP1-202ENST00000391993 MICU1Q9BPX6 476 aa16.09■□□□□ 0.17
TRAF3IP1-202ENST00000391993 CDCA4Q9BXL8 241 aa16.09■□□□□ 0.17
TRAF3IP1-202ENST00000391993 REEP4Q9H6H4 257 aa16.09■□□□□ 0.17
TRAF3IP1-202ENST00000391993 EXO5Q9H790 373 aa16.09■□□□□ 0.17
TRAF3IP1-202ENST00000391993 SYNPO2LQ9H987 977 aa16.09■□□□□ 0.17
TRAF3IP1-202ENST00000391993 ACER3Q9NUN7 267 aa16.09■□□□□ 0.17
TRAF3IP1-202ENST00000391993 NUBP2Q9Y5Y2 271 aa16.09■□□□□ 0.17
TRAF3IP1-202ENST00000391993 NHSQ6T4R5 1651 aa16.09■□□□□ 0.17
TRAF3IP1-202ENST00000391993 WNK3Q9BYP7 1800 aa16.08■□□□□ 0.17
TRAF3IP1-202ENST00000391993 KRBOX1C9JBD0 128 aa16.08■□□□□ 0.17
TRAF3IP1-202ENST00000391993 SHOXO15266 292 aa16.08■□□□□ 0.17
TRAF3IP1-202ENST00000391993 SDC3O75056 442 aa16.08■□□□□ 0.17
TRAF3IP1-202ENST00000391993 GYPBP06028 91 aa16.08■□□□□ 0.17
TRAF3IP1-202ENST00000391993 GNSP15586 552 aa16.08■□□□□ 0.17
TRAF3IP1-202ENST00000391993 GPX2P18283 190 aa16.08■□□□□ 0.17
TRAF3IP1-202ENST00000391993 NAA10P41227 235 aaPredicted RBP16.08■□□□□ 0.17
TRAF3IP1-202ENST00000391993 SLC6A19Q695T7 634 aa16.08■□□□□ 0.17
TRAF3IP1-202ENST00000391993 PAQR7Q86WK9 346 aa16.08■□□□□ 0.17
TRAF3IP1-202ENST00000391993 OR7G3Q8NG95 312 aa16.08■□□□□ 0.17
TRAF3IP1-202ENST00000391993 OR10K1Q8NGX5 313 aa16.08■□□□□ 0.17
TRAF3IP1-202ENST00000391993 SMAP2Q8WU79 429 aaPredicted RBP16.08■□□□□ 0.17
TRAF3IP1-202ENST00000391993 ZCCHC2Q9C0B9 1178 aaKnown RBP16.08■□□□□ 0.17
TRAF3IP1-202ENST00000391993 EXOSC1Q9Y3B2 195 aaKnown RBP16.08■□□□□ 0.17
TRAF3IP1-202ENST00000391993 FZD7O75084 574 aa16.08■□□□□ 0.16
TRAF3IP1-202ENST00000391993 SERPINA3P01011 423 aa16.08■□□□□ 0.16
TRAF3IP1-202ENST00000391993 RLN2P04090 185 aa16.08■□□□□ 0.16
TRAF3IP1-202ENST00000391993 TPOP07202 933 aa16.08■□□□□ 0.16
TRAF3IP1-202ENST00000391993 HSD3B1P14060 373 aa16.08■□□□□ 0.16
TRAF3IP1-202ENST00000391993 NFYAP23511 347 aaPredicted RBP16.08■□□□□ 0.16
TRAF3IP1-202ENST00000391993 SSR2P43308 183 aa16.08■□□□□ 0.16
TRAF3IP1-202ENST00000391993 EVX1P49640 407 aa16.08■□□□□ 0.16
TRAF3IP1-202ENST00000391993 WDR5P61964 334 aaKnown RBP16.08■□□□□ 0.16
TRAF3IP1-202ENST00000391993 NANOGP1Q8N7R0 232 aa16.08■□□□□ 0.16
TRAF3IP1-202ENST00000391993 ZDHHC1Q8WTX9 485 aa16.08■□□□□ 0.16
TRAF3IP1-202ENST00000391993 OR2M2Q96R28 347 aa16.08■□□□□ 0.16
TRAF3IP1-202ENST00000391993 MNTQ99583 582 aa16.08■□□□□ 0.16
TRAF3IP1-202ENST00000391993 SCAMP1O15126 338 aa16.08■□□□□ 0.16
TRAF3IP1-202ENST00000391993 FLRT2O43155 660 aa16.08■□□□□ 0.16
TRAF3IP1-202ENST00000391993 ZNF763Q0D2J5 394 aa16.08■□□□□ 0.16
TRAF3IP1-202ENST00000391993 ACSM5Q6NUN0 579 aa16.08■□□□□ 0.16
TRAF3IP1-202ENST00000391993 OR51A7Q8NH64 312 aa16.08■□□□□ 0.16
TRAF3IP1-202ENST00000391993 USB1Q9BQ65 265 aaKnown RBP16.08■□□□□ 0.16
TRAF3IP1-202ENST00000391993 SLITRK2Q9H156 845 aa16.08■□□□□ 0.16
TRAF3IP1-202ENST00000391993 SLC25A18Q9H1K4 315 aa16.08■□□□□ 0.16
TRAF3IP1-202ENST00000391993 PHLPP1O60346 1717 aa16.07■□□□□ 0.16
TRAF3IP1-202ENST00000391993 SMIM35A0A1B0GVV1 85 aa16.07■□□□□ 0.16
TRAF3IP1-202ENST00000391993 EFCAB14O75071 495 aa16.07■□□□□ 0.16
TRAF3IP1-202ENST00000391993 GRPRP30550 384 aa16.07■□□□□ 0.16
TRAF3IP1-202ENST00000391993 RPL9P32969 192 aaKnown RBP16.07■□□□□ 0.16
TRAF3IP1-202ENST00000391993 PCGF2P35227 344 aa16.07■□□□□ 0.16
TRAF3IP1-202ENST00000391993 AP3S2P59780 193 aa16.07■□□□□ 0.16
TRAF3IP1-202ENST00000391993 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.07■□□□□ 0.16
TRAF3IP1-202ENST00000391993 PODNL1Q6PEZ8 512 aa16.07■□□□□ 0.16
TRAF3IP1-202ENST00000391993 LRRC70Q7Z2Q7 622 aa16.07■□□□□ 0.16
TRAF3IP1-202ENST00000391993 WDR26Q9H7D7 661 aa16.07■□□□□ 0.16
TRAF3IP1-202ENST00000391993 IL26Q9NPH9 171 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms