RNA–Protein interactions for RNA: ENST00000390993.1

SNORD28B-201, Transcript of small nucleolar RNA, C/D box 28B, humanhuman

BASIC

Gene SNORD28B, Length 75 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28B-201ENST00000390993 RTN2O75298 545 aa0.81□□□□□ -2.28
SNORD28B-201ENST00000390993 ATP6V1G1O75348 118 aa0.81□□□□□ -2.28
SNORD28B-201ENST00000390993 LYPLA1O75608 230 aaPredicted RBP0.81□□□□□ -2.28
SNORD28B-201ENST00000390993 NOL4O94818 638 aa0.81□□□□□ -2.28
SNORD28B-201ENST00000390993 UFL1O94874 794 aa0.81□□□□□ -2.28
SNORD28B-201ENST00000390993 CPNE6O95741 557 aa0.81□□□□□ -2.28
SNORD28B-201ENST00000390993 CSF2P04141 144 aa0.81□□□□□ -2.28
SNORD28B-201ENST00000390993 APRTP07741 180 aa0.81□□□□□ -2.28
SNORD28B-201ENST00000390993 HSP90AA1P07900 732 aaKnown RBP0.81□□□□□ -2.28
SNORD28B-201ENST00000390993 HIST1H2AGP0C0S8 130 aaPredicted RBP0.81□□□□□ -2.28
SNORD28B-201ENST00000390993 TOP1P11387 765 aaKnown RBP0.81□□□□□ -2.28
SNORD28B-201ENST00000390993 SDC1P18827 310 aa0.81□□□□□ -2.28
SNORD28B-201ENST00000390993 IGFBP5P24593 272 aa0.81□□□□□ -2.28
SNORD28B-201ENST00000390993 OR1D2P34982 312 aa0.81□□□□□ -2.28
SNORD28B-201ENST00000390993 SAA4P35542 130 aa0.81□□□□□ -2.28
SNORD28B-201ENST00000390993 RPL4P36578 427 aaKnown RBP0.81□□□□□ -2.28
SNORD28B-201ENST00000390993 LONP1P36776 959 aaKnown RBP0.81□□□□□ -2.28
SNORD28B-201ENST00000390993 CSNK1DP48730 415 aa0.81□□□□□ -2.28
SNORD28B-201ENST00000390993 CAV2P51636 162 aa0.81□□□□□ -2.28
SNORD28B-201ENST00000390993 SUCLG1P53597 346 aaKnown RBP0.81□□□□□ -2.28
SNORD28B-201ENST00000390993 UBXN1Q04323 297 aa0.81□□□□□ -2.28
SNORD28B-201ENST00000390993 ZNF33BQ06732 778 aa0.81□□□□□ -2.28
SNORD28B-201ENST00000390993 KLF5Q13887 457 aaPredicted RBP0.81□□□□□ -2.28
SNORD28B-201ENST00000390993 ELAVL3Q14576 367 aaKnown RBP0.81□□□□□ -2.28
SNORD28B-201ENST00000390993 HERPUD1Q15011 391 aa0.81□□□□□ -2.28
SNORD28B-201ENST00000390993 TOMM20Q15388 145 aa0.81□□□□□ -2.28
SNORD28B-201ENST00000390993 CD226Q15762 336 aa0.81□□□□□ -2.28
SNORD28B-201ENST00000390993 SYPL1Q16563 259 aa0.81□□□□□ -2.28
SNORD28B-201ENST00000390993 HKDC1Q2TB90 917 aa0.81□□□□□ -2.28
SNORD28B-201ENST00000390993 SEL1L2Q5TEA6 688 aa0.81□□□□□ -2.28
SNORD28B-201ENST00000390993 ZNF691Q5VV52 312 aa0.81□□□□□ -2.28
SNORD28B-201ENST00000390993 HIST2H2AA3Q6FI13 130 aa0.81□□□□□ -2.28
SNORD28B-201ENST00000390993 OR5M10Q6IEU7 315 aa0.81□□□□□ -2.28
SNORD28B-201ENST00000390993 CAVIN1Q6NZI2 390 aaKnown RBP0.81□□□□□ -2.28
SNORD28B-201ENST00000390993 CDC42EP5Q6NZY7 148 aa0.81□□□□□ -2.28
SNORD28B-201ENST00000390993 ATRAIDQ6UW56 229 aa0.81□□□□□ -2.28
SNORD28B-201ENST00000390993 DNM1P46Q6ZS02 220 aa0.81□□□□□ -2.28
SNORD28B-201ENST00000390993 FRA10AC1Q70Z53 315 aa0.81□□□□□ -2.28
SNORD28B-201ENST00000390993 TRPM8Q7Z2W7 1104 aa0.81□□□□□ -2.28
SNORD28B-201ENST00000390993 PCGF5Q86SE9 256 aa0.81□□□□□ -2.28
SNORD28B-201ENST00000390993 LINC01551Q86U37 167 aa0.81□□□□□ -2.28
SNORD28B-201ENST00000390993 ITIH5Q86UX2 942 aa0.81□□□□□ -2.28
SNORD28B-201ENST00000390993 HOOK3Q86VS8 718 aa0.81□□□□□ -2.28
SNORD28B-201ENST00000390993 RANBP3LQ86VV4 465 aaPredicted RBP0.81□□□□□ -2.28
SNORD28B-201ENST00000390993 PPP1R27Q86WC6 154 aa0.81□□□□□ -2.28
SNORD28B-201ENST00000390993 HIST2H2ABQ8IUE6 130 aaPredicted RBP0.81□□□□□ -2.28
SNORD28B-201ENST00000390993 AQP12AQ8IXF9 295 aa0.81□□□□□ -2.28
SNORD28B-201ENST00000390993 GPR65Q8IYL9 337 aa0.81□□□□□ -2.28
SNORD28B-201ENST00000390993 NUP93Q8N1F7 819 aa0.81□□□□□ -2.28
SNORD28B-201ENST00000390993 ATAD1Q8NBU5 361 aa0.81□□□□□ -2.28
SNORD28B-201ENST00000390993 UXS1Q8NBZ7 420 aa0.81□□□□□ -2.28
SNORD28B-201ENST00000390993 ZNF397Q8NF99 534 aaPredicted RBP0.81□□□□□ -2.28
SNORD28B-201ENST00000390993 OR7G3Q8NG95 312 aa0.81□□□□□ -2.28
SNORD28B-201ENST00000390993 OR4L1Q8NH43 312 aa0.81□□□□□ -2.28
SNORD28B-201ENST00000390993 SRSF12Q8WXF0 261 aaKnown RBP0.81□□□□□ -2.28
SNORD28B-201ENST00000390993 HIST1H2ACQ93077 130 aa0.81□□□□□ -2.28
SNORD28B-201ENST00000390993 LHX4Q969G2 390 aa0.81□□□□□ -2.28
SNORD28B-201ENST00000390993 TEKT1Q969V4 418 aa0.81□□□□□ -2.28
SNORD28B-201ENST00000390993 SLC35E1Q96K37 410 aa0.81□□□□□ -2.28
SNORD28B-201ENST00000390993 MLPHQ9BV36 600 aaPredicted RBP0.81□□□□□ -2.28
SNORD28B-201ENST00000390993 UTP14AQ9BVJ6 771 aaKnown RBP0.81□□□□□ -2.28
SNORD28B-201ENST00000390993 FUNDC2Q9BWH2 189 aa0.81□□□□□ -2.28
SNORD28B-201ENST00000390993 EDEM3Q9BZQ6 932 aa0.81□□□□□ -2.28
SNORD28B-201ENST00000390993 CARD9Q9H257 536 aa0.81□□□□□ -2.28
SNORD28B-201ENST00000390993 CXXC4Q9H2H0 198 aa0.81□□□□□ -2.28
SNORD28B-201ENST00000390993 NARFLQ9H6Q4 476 aa0.81□□□□□ -2.28
SNORD28B-201ENST00000390993 ZDHHC6Q9H6R6 413 aa0.81□□□□□ -2.28
SNORD28B-201ENST00000390993 ALG9Q9H6U8 611 aa0.81□□□□□ -2.28
SNORD28B-201ENST00000390993 RNPEPL1Q9HAU8 725 aa0.81□□□□□ -2.28
SNORD28B-201ENST00000390993 NRN1Q9NPD7 142 aa0.81□□□□□ -2.28
SNORD28B-201ENST00000390993 ZDHHC4Q9NPG8 344 aa0.81□□□□□ -2.28
SNORD28B-201ENST00000390993 ACOXLQ9NUZ1 547 aa0.81□□□□□ -2.28
SNORD28B-201ENST00000390993 MARCH5Q9NX47 278 aa0.81□□□□□ -2.28
SNORD28B-201ENST00000390993 CHCHD3Q9NX63 227 aaKnown RBP0.81□□□□□ -2.28
SNORD28B-201ENST00000390993 TECRQ9NZ01 308 aaKnown RBP0.81□□□□□ -2.28
SNORD28B-201ENST00000390993 CD274Q9NZQ7 290 aa0.81□□□□□ -2.28
SNORD28B-201ENST00000390993 NFKBIL1Q9UBC1 381 aaPredicted RBP0.81□□□□□ -2.28
SNORD28B-201ENST00000390993 SLC2A6Q9UGQ3 507 aa0.81□□□□□ -2.28
SNORD28B-201ENST00000390993 LEF1Q9UJU2 399 aaPredicted RBP0.81□□□□□ -2.28
SNORD28B-201ENST00000390993 BARX2Q9UMQ3 279 aaPredicted RBP0.81□□□□□ -2.28
SNORD28B-201ENST00000390993 NEU3Q9UQ49 428 aa0.81□□□□□ -2.28
SNORD28B-201ENST00000390993 GRIN2DO15399 1336 aa0.81□□□□□ -2.28
SNORD28B-201ENST00000390993 ARID1AO14497 2285 aa0.81□□□□□ -2.28
SNORD28B-201ENST00000390993 GTF3C1Q12789 2109 aa0.8□□□□□ -2.28
SNORD28B-201ENST00000390993 IGKV1D-17A0A075B6S4 117 aa0.8□□□□□ -2.28
SNORD28B-201ENST00000390993 IGHV7-81A0A0B4J1V7 117 aa0.8□□□□□ -2.28
SNORD28B-201ENST00000390993 SMIM28A0A1B0GU29 152 aa0.8□□□□□ -2.28
SNORD28B-201ENST00000390993 B4DXG7 233 aa0.8□□□□□ -2.28
SNORD28B-201ENST00000390993 NPIPA2E9PIF3 369 aa0.8□□□□□ -2.28
SNORD28B-201ENST00000390993 E9PLD3 99 aa0.8□□□□□ -2.28
SNORD28B-201ENST00000390993 H7C0S8 307 aa0.8□□□□□ -2.28
SNORD28B-201ENST00000390993 PANO1I0J062 215 aa0.8□□□□□ -2.28
SNORD28B-201ENST00000390993 CACNB4O00305 520 aaPredicted RBP0.8□□□□□ -2.28
SNORD28B-201ENST00000390993 NBR2O15453 112 aa0.8□□□□□ -2.28
SNORD28B-201ENST00000390993 ST8SIA3O43173 380 aa0.8□□□□□ -2.28
SNORD28B-201ENST00000390993 RANBP6O60518 1105 aaKnown RBP0.8□□□□□ -2.28
SNORD28B-201ENST00000390993 TOXO94900 526 aa0.8□□□□□ -2.28
SNORD28B-201ENST00000390993 TXNDC12O95881 172 aa0.8□□□□□ -2.28
SNORD28B-201ENST00000390993 IGHG3P01860 377 aa0.8□□□□□ -2.28
SNORD28B-201ENST00000390993 SEMG1P04279 462 aa0.8□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms