RNA–Protein interactions for RNA: ENST00000390971.1

SNORA40.4-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.4-201ENST00000390971 A0A0U1RQG5 324 aaPredicted RBP4.05□□□□□ -1.76
SNORA40.4-201ENST00000390971 NPY2RP49146 381 aa4.05□□□□□ -1.76
SNORA40.4-201ENST00000390971 TSEN54Q7Z6J9 526 aaKnown RBP4.05□□□□□ -1.76
SNORA40.4-201ENST00000390971 MLKLQ8NB16 471 aa4.05□□□□□ -1.76
SNORA40.4-201ENST00000390971 LINC01006Q8NI28 216 aa4.05□□□□□ -1.76
SNORA40.4-201ENST00000390971 DLX4Q92988 240 aaPredicted RBP4.05□□□□□ -1.76
SNORA40.4-201ENST00000390971 EEF2KMTQ96G04 330 aa4.05□□□□□ -1.76
SNORA40.4-201ENST00000390971 LINC00167Q96N53 147 aa4.05□□□□□ -1.76
SNORA40.4-201ENST00000390971 HCAR1Q9BXC0 346 aa4.05□□□□□ -1.76
SNORA40.4-201ENST00000390971 OPN3Q9H1Y3 402 aaPredicted RBP4.05□□□□□ -1.76
SNORA40.4-201ENST00000390971 HPS4Q9NQG7 708 aa4.05□□□□□ -1.76
SNORA40.4-201ENST00000390971 KLRF1Q9NZS2 232 aa4.05□□□□□ -1.76
SNORA40.4-201ENST00000390971 PRO0461Q9UI25 63 aa4.05□□□□□ -1.76
SNORA40.4-201ENST00000390971 ZFP92A6NM28 416 aa4.04□□□□□ -1.76
SNORA40.4-201ENST00000390971 SYNGR4O95473 234 aa4.04□□□□□ -1.76
SNORA40.4-201ENST00000390971 ALDH3B2P48448 385 aa4.04□□□□□ -1.76
SNORA40.4-201ENST00000390971 NT5C2P49902 561 aa4.04□□□□□ -1.76
SNORA40.4-201ENST00000390971 CNN1P51911 297 aaKnown RBP4.04□□□□□ -1.76
SNORA40.4-201ENST00000390971 GALK2Q01415 458 aa4.04□□□□□ -1.76
SNORA40.4-201ENST00000390971 PAGE2BQ5JRK9 111 aa4.04□□□□□ -1.76
SNORA40.4-201ENST00000390971 PRR5LQ6MZQ0 368 aa4.04□□□□□ -1.76
SNORA40.4-201ENST00000390971 DPY19L2P2Q6ZN68 376 aa4.04□□□□□ -1.76
SNORA40.4-201ENST00000390971 UNC45BQ8IWX7 931 aa4.04□□□□□ -1.76
SNORA40.4-201ENST00000390971 APOOQ9BUR5 198 aa4.04□□□□□ -1.76
SNORA40.4-201ENST00000390971 ALG9Q9H6U8 611 aa4.04□□□□□ -1.76
SNORA40.4-201ENST00000390971 PLSCR3Q9NRY6 295 aa4.04□□□□□ -1.76
SNORA40.4-201ENST00000390971 COPS7AQ9UBW8 275 aa4.04□□□□□ -1.76
SNORA40.4-201ENST00000390971 APOBEC3BQ9UH17 382 aaKnown RBP4.04□□□□□ -1.76
SNORA40.4-201ENST00000390971 PURGQ9UJV8 347 aaKnown RBP4.04□□□□□ -1.76
SNORA40.4-201ENST00000390971 IGLV8-61A0A075B6I0 122 aa4.03□□□□□ -1.76
SNORA40.4-201ENST00000390971 NPIPA2E9PIF3 369 aa4.03□□□□□ -1.76
SNORA40.4-201ENST00000390971 KRT6AP02538 564 aa4.03□□□□□ -1.76
SNORA40.4-201ENST00000390971 KRT6BP04259 564 aa4.03□□□□□ -1.76
SNORA40.4-201ENST00000390971 CD1EP15812 388 aa4.03□□□□□ -1.76
SNORA40.4-201ENST00000390971 MARCKSP29966 332 aaPredicted RBP4.03□□□□□ -1.76
SNORA40.4-201ENST00000390971 KRT6CP48668 564 aa4.03□□□□□ -1.76
SNORA40.4-201ENST00000390971 PITPNBP48739 271 aa4.03□□□□□ -1.76
SNORA40.4-201ENST00000390971 RAG2P55895 527 aa4.03□□□□□ -1.76
SNORA40.4-201ENST00000390971 STX17P56962 302 aa4.03□□□□□ -1.76
SNORA40.4-201ENST00000390971 SSTP61278 116 aa4.03□□□□□ -1.76
SNORA40.4-201ENST00000390971 HERC4Q5GLZ8 1057 aaPredicted RBP4.03□□□□□ -1.76
SNORA40.4-201ENST00000390971 ZNF677Q86XU0 584 aa4.03□□□□□ -1.76
SNORA40.4-201ENST00000390971 CADM2Q8N3J6 435 aa4.03□□□□□ -1.76
SNORA40.4-201ENST00000390971 OR2L5Q8NG80 312 aa4.03□□□□□ -1.76
SNORA40.4-201ENST00000390971 ZNF564Q8TBZ8 553 aaPredicted RBP4.03□□□□□ -1.76
SNORA40.4-201ENST00000390971 TSPAN18Q96SJ8 248 aa4.03□□□□□ -1.76
SNORA40.4-201ENST00000390971 NLNQ9BYT8 704 aa4.03□□□□□ -1.76
SNORA40.4-201ENST00000390971 STARD5Q9NSY2 213 aa4.03□□□□□ -1.76
SNORA40.4-201ENST00000390971 LHX3Q9UBR4 397 aa4.03□□□□□ -1.76
SNORA40.4-201ENST00000390971 RPH3AQ9Y2J0 694 aaPredicted RBP4.03□□□□□ -1.76
SNORA40.4-201ENST00000390971 DHRS7Q9Y394 339 aa4.03□□□□□ -1.76
SNORA40.4-201ENST00000390971 CFAP65Q6ZU64 1925 aaKnown RBP4.03□□□□□ -1.76
SNORA40.4-201ENST00000390971 NPC1L1Q9UHC9 1359 aa4.02□□□□□ -1.77
SNORA40.4-201ENST00000390971 TRBV7-9A0A0J9YWB2 115 aa4.02□□□□□ -1.77
SNORA40.4-201ENST00000390971 CCDC69A6NI79 296 aa4.02□□□□□ -1.77
SNORA40.4-201ENST00000390971 BUB1O43683 1085 aa4.02□□□□□ -1.77
SNORA40.4-201ENST00000390971 SERF1AO75920 110 aa4.02□□□□□ -1.77
SNORA40.4-201ENST00000390971 GOSR1O95249 250 aa4.02□□□□□ -1.77
SNORA40.4-201ENST00000390971 IGSF6O95976 241 aa4.02□□□□□ -1.77
SNORA40.4-201ENST00000390971 ELK1P19419 428 aa4.02□□□□□ -1.77
SNORA40.4-201ENST00000390971 IL2RGP31785 369 aa4.02□□□□□ -1.77
SNORA40.4-201ENST00000390971 SGSHP51688 502 aa4.02□□□□□ -1.77
SNORA40.4-201ENST00000390971 NLRP11P59045 1033 aaKnown RBP4.02□□□□□ -1.77
SNORA40.4-201ENST00000390971 C17orf67Q0P5P2 114 aa4.02□□□□□ -1.77
SNORA40.4-201ENST00000390971 PPP1R8Q12972 351 aaKnown RBP4.02□□□□□ -1.77
SNORA40.4-201ENST00000390971 EIF2B1Q14232 305 aaKnown RBP4.02□□□□□ -1.77
SNORA40.4-201ENST00000390971 CMPK2Q5EBM0 449 aa4.02□□□□□ -1.77
SNORA40.4-201ENST00000390971 PRAMEF7Q5VXH5 474 aa4.02□□□□□ -1.77
SNORA40.4-201ENST00000390971 Q6ZVH6 145 aa4.02□□□□□ -1.77
SNORA40.4-201ENST00000390971 BNIPLQ7Z465 357 aa4.02□□□□□ -1.77
SNORA40.4-201ENST00000390971 OR4F17Q8NGA8 305 aa4.02□□□□□ -1.77
SNORA40.4-201ENST00000390971 TMEM45BQ96B21 275 aa4.02□□□□□ -1.77
SNORA40.4-201ENST00000390971 DNAJA3Q96EY1 480 aa4.02□□□□□ -1.77
SNORA40.4-201ENST00000390971 DEFB118Q96PH6 123 aa4.02□□□□□ -1.77
SNORA40.4-201ENST00000390971 OR4F4Q96R69 305 aa4.02□□□□□ -1.77
SNORA40.4-201ENST00000390971 NAP1L3Q99457 506 aaPredicted RBP4.02□□□□□ -1.77
SNORA40.4-201ENST00000390971 FAM124BQ9H5Z6 455 aaPredicted RBP4.02□□□□□ -1.77
SNORA40.4-201ENST00000390971 MIEF1Q9NQG6 463 aa4.02□□□□□ -1.77
SNORA40.4-201ENST00000390971 EXOSC3Q9NQT5 275 aaKnown RBP4.02□□□□□ -1.77
SNORA40.4-201ENST00000390971 CWC25Q9NXE8 425 aaPredicted RBP4.02□□□□□ -1.77
SNORA40.4-201ENST00000390971 TMEM9Q9P0T7 183 aa4.02□□□□□ -1.77
SNORA40.4-201ENST00000390971 BARX2Q9UMQ3 279 aaPredicted RBP4.02□□□□□ -1.77
SNORA40.4-201ENST00000390971 CA5BQ9Y2D0 317 aa4.02□□□□□ -1.77
SNORA40.4-201ENST00000390971 RAD54L2Q9Y4B4 1467 aa4.02□□□□□ -1.77
SNORA40.4-201ENST00000390971 MACROD2A1Z1Q3 448 aa4.01□□□□□ -1.77
SNORA40.4-201ENST00000390971 LRIT2A6NDA9 550 aa4.01□□□□□ -1.77
SNORA40.4-201ENST00000390971 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.01□□□□□ -1.77
SNORA40.4-201ENST00000390971 TLR4O00206 839 aa4.01□□□□□ -1.77
SNORA40.4-201ENST00000390971 TMOD1P28289 359 aa4.01□□□□□ -1.77
SNORA40.4-201ENST00000390971 NOP14P78316 857 aaKnown RBP4.01□□□□□ -1.77
SNORA40.4-201ENST00000390971 GLYR1Q49A26 553 aaPredicted RBP4.01□□□□□ -1.77
SNORA40.4-201ENST00000390971 LGSNQ5TDP6 509 aa4.01□□□□□ -1.77
SNORA40.4-201ENST00000390971 ZNF544Q6NX49 715 aa4.01□□□□□ -1.77
SNORA40.4-201ENST00000390971 C14orf178Q8N769 122 aaPredicted RBP4.01□□□□□ -1.77
SNORA40.4-201ENST00000390971 ZNF560Q96MR9 790 aa4.01□□□□□ -1.77
SNORA40.4-201ENST00000390971 C19orf24Q9BVV8 132 aa4.01□□□□□ -1.77
SNORA40.4-201ENST00000390971 HMG20BQ9P0W2 317 aa4.01□□□□□ -1.77
SNORA40.4-201ENST00000390971 MIOXQ9UGB7 285 aa4.01□□□□□ -1.77
SNORA40.4-201ENST00000390971 FAM153AQ9UHL3 310 aa4.01□□□□□ -1.77
SNORA40.4-201ENST00000390971 FLVCR1Q9Y5Y0 555 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms