RNA–Protein interactions for RNA: ENST00000390847.1

SNORA40.2-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.2-201ENST00000390847 ZBED8Q8IZ13 594 aa3.35□□□□□ -1.87
SNORA40.2-201ENST00000390847 CHCHD4Q8N4Q1 142 aa3.35□□□□□ -1.87
SNORA40.2-201ENST00000390847 KLHL30-AS1Q8NEE0 82 aa3.35□□□□□ -1.87
SNORA40.2-201ENST00000390847 RFESDQ8TAC1 157 aa3.35□□□□□ -1.87
SNORA40.2-201ENST00000390847 PPP1R16AQ96I34 528 aa3.35□□□□□ -1.87
SNORA40.2-201ENST00000390847 PIWIL1Q96J94 861 aaKnown RBP3.35□□□□□ -1.87
SNORA40.2-201ENST00000390847 SERAC1Q96JX3 654 aa3.35□□□□□ -1.87
SNORA40.2-201ENST00000390847 SPXQ9BT56 116 aa3.35□□□□□ -1.87
SNORA40.2-201ENST00000390847 NDUFAF3Q9BU61 184 aa3.35□□□□□ -1.87
SNORA40.2-201ENST00000390847 FAM120CQ9NX05 1096 aaKnown RBP3.35□□□□□ -1.87
SNORA40.2-201ENST00000390847 IMPAD1Q9NX62 359 aa3.35□□□□□ -1.87
SNORA40.2-201ENST00000390847 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.35□□□□□ -1.87
SNORA40.2-201ENST00000390847 BCAP29Q9UHQ4 241 aa3.35□□□□□ -1.87
SNORA40.2-201ENST00000390847 NUDCQ9Y266 331 aa3.35□□□□□ -1.87
SNORA40.2-201ENST00000390847 KLF2Q9Y5W3 355 aaPredicted RBP3.35□□□□□ -1.87
SNORA40.2-201ENST00000390847 GON4LQ3T8J9 2241 aa3.35□□□□□ -1.87
SNORA40.2-201ENST00000390847 PTPRUQ92729 1446 aa3.35□□□□□ -1.87
SNORA40.2-201ENST00000390847 NOTCH3Q9UM47 2321 aa3.35□□□□□ -1.87
SNORA40.2-201ENST00000390847 ABCC9O60706 1549 aa3.34□□□□□ -1.87
SNORA40.2-201ENST00000390847 H3BMH7 237 aa3.34□□□□□ -1.87
SNORA40.2-201ENST00000390847 WNT2P09544 360 aa3.34□□□□□ -1.87
SNORA40.2-201ENST00000390847 ACP1P24666 158 aa3.34□□□□□ -1.87
SNORA40.2-201ENST00000390847 PRDX6P30041 224 aa3.34□□□□□ -1.87
SNORA40.2-201ENST00000390847 RFC2P35250 354 aa3.34□□□□□ -1.87
SNORA40.2-201ENST00000390847 PPIAP62937 165 aaKnown RBP3.34□□□□□ -1.87
SNORA40.2-201ENST00000390847 SRYQ05066 204 aa3.34□□□□□ -1.87
SNORA40.2-201ENST00000390847 ZNF33BQ06732 778 aa3.34□□□□□ -1.87
SNORA40.2-201ENST00000390847 ZIC1Q15915 447 aa3.34□□□□□ -1.87
SNORA40.2-201ENST00000390847 PARP6Q2NL67 630 aa3.34□□□□□ -1.87
SNORA40.2-201ENST00000390847 PRR5LQ6MZQ0 368 aa3.34□□□□□ -1.87
SNORA40.2-201ENST00000390847 CCBE1Q6UXH8 406 aaPredicted RBP3.34□□□□□ -1.87
SNORA40.2-201ENST00000390847 TMEM26Q6ZUK4 368 aa3.34□□□□□ -1.87
SNORA40.2-201ENST00000390847 P4HA3Q7Z4N8 544 aa3.34□□□□□ -1.87
SNORA40.2-201ENST00000390847 SPEM1Q8N4L4 309 aa3.34□□□□□ -1.87
SNORA40.2-201ENST00000390847 ZNF397Q8NF99 534 aaPredicted RBP3.34□□□□□ -1.87
SNORA40.2-201ENST00000390847 WDR36Q8NI36 951 aaKnown RBP3.34□□□□□ -1.87
SNORA40.2-201ENST00000390847 TMEM237Q96Q45 408 aa3.34□□□□□ -1.87
SNORA40.2-201ENST00000390847 TMEM231Q9H6L2 316 aa3.34□□□□□ -1.87
SNORA40.2-201ENST00000390847 PURGQ9UJV8 347 aaKnown RBP3.34□□□□□ -1.87
SNORA40.2-201ENST00000390847 FZR1Q9UM11 496 aa3.34□□□□□ -1.87
SNORA40.2-201ENST00000390847 ZMYM6O95789 1325 aa3.34□□□□□ -1.87
SNORA40.2-201ENST00000390847 LCMT2O60294 686 aaKnown RBP3.33□□□□□ -1.88
SNORA40.2-201ENST00000390847 SDC3O75056 442 aa3.33□□□□□ -1.88
SNORA40.2-201ENST00000390847 STK17BO94768 372 aa3.33□□□□□ -1.88
SNORA40.2-201ENST00000390847 IGSF6O95976 241 aa3.33□□□□□ -1.88
SNORA40.2-201ENST00000390847 ZCCHC18P0CG32 403 aa3.33□□□□□ -1.88
SNORA40.2-201ENST00000390847 PGAM2P15259 253 aa3.33□□□□□ -1.88
SNORA40.2-201ENST00000390847 IDSP22304 550 aa3.33□□□□□ -1.88
SNORA40.2-201ENST00000390847 ARHGDIBP52566 201 aa3.33□□□□□ -1.88
SNORA40.2-201ENST00000390847 SLC26A5P58743 744 aa3.33□□□□□ -1.88
SNORA40.2-201ENST00000390847 ZNF699Q32M78 642 aa3.33□□□□□ -1.88
SNORA40.2-201ENST00000390847 BEND6Q5SZJ8 279 aaPredicted RBP3.33□□□□□ -1.88
SNORA40.2-201ENST00000390847 TATDN1Q6P1N9 297 aa3.33□□□□□ -1.88
SNORA40.2-201ENST00000390847 PLBD1Q6P4A8 553 aa3.33□□□□□ -1.88
SNORA40.2-201ENST00000390847 FAM159AQ6UWV7 190 aa3.33□□□□□ -1.88
SNORA40.2-201ENST00000390847 OLFM4Q6UX06 510 aa3.33□□□□□ -1.88
SNORA40.2-201ENST00000390847 FBXL16Q8N461 479 aa3.33□□□□□ -1.88
SNORA40.2-201ENST00000390847 DLX4Q92988 240 aaPredicted RBP3.33□□□□□ -1.88
SNORA40.2-201ENST00000390847 TMEM186Q96B77 213 aa3.33□□□□□ -1.88
SNORA40.2-201ENST00000390847 CCDC51Q96ER9 411 aa3.33□□□□□ -1.88
SNORA40.2-201ENST00000390847 C9orf85Q96MD7 179 aa3.33□□□□□ -1.88
SNORA40.2-201ENST00000390847 ATG10Q9H0Y0 220 aa3.33□□□□□ -1.88
SNORA40.2-201ENST00000390847 STARD5Q9NSY2 213 aa3.33□□□□□ -1.88
SNORA40.2-201ENST00000390847 GDAP2Q9NXN4 497 aa3.33□□□□□ -1.88
SNORA40.2-201ENST00000390847 IL20RAQ9UHF4 553 aa3.33□□□□□ -1.88
SNORA40.2-201ENST00000390847 ZNF490Q9ULM2 529 aaPredicted RBP3.33□□□□□ -1.88
SNORA40.2-201ENST00000390847 NTNG1Q9Y2I2 539 aa3.33□□□□□ -1.88
SNORA40.2-201ENST00000390847 DHRS7Q9Y394 339 aa3.33□□□□□ -1.88
SNORA40.2-201ENST00000390847 RNF115Q9Y4L5 304 aa3.33□□□□□ -1.88
SNORA40.2-201ENST00000390847 RAD54L2Q9Y4B4 1467 aa3.33□□□□□ -1.88
SNORA40.2-201ENST00000390847 RNF103-CHMP3A0A140T963 221 aa3.32□□□□□ -1.88
SNORA40.2-201ENST00000390847 A0A1B0GVY2 172 aa3.32□□□□□ -1.88
SNORA40.2-201ENST00000390847 A0A1W2PQ72 361 aa3.32□□□□□ -1.88
SNORA40.2-201ENST00000390847 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.32□□□□□ -1.88
SNORA40.2-201ENST00000390847 ADAM12O43184 909 aa3.32□□□□□ -1.88
SNORA40.2-201ENST00000390847 SSX5O60225 188 aa3.32□□□□□ -1.88
SNORA40.2-201ENST00000390847 RALAP11233 206 aa3.32□□□□□ -1.88
SNORA40.2-201ENST00000390847 KLK2P20151 261 aa3.32□□□□□ -1.88
SNORA40.2-201ENST00000390847 PRDX2P32119 198 aa3.32□□□□□ -1.88
SNORA40.2-201ENST00000390847 HERVK_113P63132 956 aa3.32□□□□□ -1.88
SNORA40.2-201ENST00000390847 ERVK-8P63133 956 aa3.32□□□□□ -1.88
SNORA40.2-201ENST00000390847 PAX2Q02962 417 aa3.32□□□□□ -1.88
SNORA40.2-201ENST00000390847 SNX1Q13596 522 aa3.32□□□□□ -1.88
SNORA40.2-201ENST00000390847 GAMTQ14353 236 aa3.32□□□□□ -1.88
SNORA40.2-201ENST00000390847 GSG1Q2KHT4 349 aa3.32□□□□□ -1.88
SNORA40.2-201ENST00000390847 NEK5Q6P3R8 708 aa3.32□□□□□ -1.88
SNORA40.2-201ENST00000390847 GCNT7Q6ZNI0 430 aa3.32□□□□□ -1.88
SNORA40.2-201ENST00000390847 UNC5CLQ8IV45 518 aa3.32□□□□□ -1.88
SNORA40.2-201ENST00000390847 ZNF584Q8IVC4 421 aa3.32□□□□□ -1.88
SNORA40.2-201ENST00000390847 KDM8Q8N371 416 aa3.32□□□□□ -1.88
SNORA40.2-201ENST00000390847 GTSF1Q8WW33 167 aa3.32□□□□□ -1.88
SNORA40.2-201ENST00000390847 FCGR1BQ92637 280 aa3.32□□□□□ -1.88
SNORA40.2-201ENST00000390847 DNAJA3Q96EY1 480 aa3.32□□□□□ -1.88
SNORA40.2-201ENST00000390847 CARD6Q9BX69 1037 aa3.32□□□□□ -1.88
SNORA40.2-201ENST00000390847 ERVK-6Q9BXR3 956 aa3.32□□□□□ -1.88
SNORA40.2-201ENST00000390847 FAM114A2Q9NRY5 505 aa3.32□□□□□ -1.88
SNORA40.2-201ENST00000390847 DCAF13Q9NV06 445 aaKnown RBP3.32□□□□□ -1.88
SNORA40.2-201ENST00000390847 PRR34Q9NV39 138 aa3.32□□□□□ -1.88
SNORA40.2-201ENST00000390847 SPASTQ9UBP0 616 aa3.32□□□□□ -1.88
SNORA40.2-201ENST00000390847 KRT87PA6NCN2 255 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms