RNA–Protein interactions for RNA: ENST00000383801.6

SEC13-203, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2 BASIC

Gene SEC13, Length 1,479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-203ENST00000383801 OLR1P78380 273 aa12.69□□□□□ -0.38
SEC13-203ENST00000383801 MGAT2Q10469 447 aa12.69□□□□□ -0.38
SEC13-203ENST00000383801 STX4Q12846 297 aa12.69□□□□□ -0.38
SEC13-203ENST00000383801 COX10Q12887 443 aa12.69□□□□□ -0.38
SEC13-203ENST00000383801 DUSP8Q13202 625 aa12.69□□□□□ -0.38
SEC13-203ENST00000383801 LARS2Q15031 903 aaKnown RBP12.69□□□□□ -0.38
SEC13-203ENST00000383801 SHBQ15464 509 aa12.69□□□□□ -0.38
SEC13-203ENST00000383801 LTB4RQ15722 352 aa12.69□□□□□ -0.38
SEC13-203ENST00000383801 PLK5Q496M5 336 aa12.69□□□□□ -0.38
SEC13-203ENST00000383801 EIPR1Q53HC9 387 aa12.69□□□□□ -0.38
SEC13-203ENST00000383801 ZNF311Q5JNZ3 666 aa12.69□□□□□ -0.38
SEC13-203ENST00000383801 KANSL1Q7Z3B3 1105 aa12.69□□□□□ -0.38
SEC13-203ENST00000383801 OR4N5Q8IXE1 308 aa12.69□□□□□ -0.38
SEC13-203ENST00000383801 PEX5LQ8IYB4 626 aa12.69□□□□□ -0.38
SEC13-203ENST00000383801 TAGAPQ8N103 731 aa12.69□□□□□ -0.38
SEC13-203ENST00000383801 SLC16A11Q8NCK7 471 aa12.69□□□□□ -0.38
SEC13-203ENST00000383801 OR5T3Q8NGG3 340 aa12.69□□□□□ -0.38
SEC13-203ENST00000383801 OR4C6Q8NH72 309 aa12.69□□□□□ -0.38
SEC13-203ENST00000383801 OIT3Q8WWZ8 545 aa12.69□□□□□ -0.38
SEC13-203ENST00000383801 FEVQ99581 238 aa12.69□□□□□ -0.38
SEC13-203ENST00000383801 TUBA1CQ9BQE3 449 aa12.69□□□□□ -0.38
SEC13-203ENST00000383801 ARMC7Q9H6L4 198 aa12.69□□□□□ -0.38
SEC13-203ENST00000383801 PRTFDC1Q9NRG1 225 aa12.69□□□□□ -0.38
SEC13-203ENST00000383801 SERTAD3Q9UJW9 196 aa12.69□□□□□ -0.38
SEC13-203ENST00000383801 GMPPBQ9Y5P6 360 aa12.69□□□□□ -0.38
SEC13-203ENST00000383801 TNRC6BQ9UPQ9 1833 aaKnown RBP12.69□□□□□ -0.38
SEC13-203ENST00000383801 CCDC88CQ9P219 2028 aa12.69□□□□□ -0.38
SEC13-203ENST00000383801 A0A0A6YYC8 382 aaPredicted RBP12.68□□□□□ -0.38
SEC13-203ENST00000383801 A0A1W2PS29 197 aa12.68□□□□□ -0.38
SEC13-203ENST00000383801 H3BMH7 237 aa12.68□□□□□ -0.38
SEC13-203ENST00000383801 I3L1I5 382 aaPredicted RBP12.68□□□□□ -0.38
SEC13-203ENST00000383801 KIF1CO43896 1103 aaKnown RBP12.68□□□□□ -0.38
SEC13-203ENST00000383801 OR10H2O60403 315 aa12.68□□□□□ -0.38
SEC13-203ENST00000383801 STX11O75558 287 aa12.68□□□□□ -0.38
SEC13-203ENST00000383801 SEC24DO94855 1032 aaPredicted RBP12.68□□□□□ -0.38
SEC13-203ENST00000383801 NKX2-2O95096 273 aa12.68□□□□□ -0.38
SEC13-203ENST00000383801 CLIC3O95833 236 aa12.68□□□□□ -0.38
SEC13-203ENST00000383801 CRHBPP24387 322 aa12.68□□□□□ -0.38
SEC13-203ENST00000383801 CD1CP29017 333 aa12.68□□□□□ -0.38
SEC13-203ENST00000383801 SOX18P35713 384 aa12.68□□□□□ -0.38
SEC13-203ENST00000383801 PIGAP37287 484 aa12.68□□□□□ -0.38
SEC13-203ENST00000383801 PPM1FP49593 454 aaPredicted RBP12.68□□□□□ -0.38
SEC13-203ENST00000383801 OR1D5P58170 312 aa12.68□□□□□ -0.38
SEC13-203ENST00000383801 EXOC3L2Q2M3D2 409 aa12.68□□□□□ -0.38
SEC13-203ENST00000383801 DEFB110Q30KQ9 67 aa12.68□□□□□ -0.38
SEC13-203ENST00000383801 PROX2Q3B8N5 592 aa12.68□□□□□ -0.38
SEC13-203ENST00000383801 TRMT12Q53H54 448 aaKnown RBP12.68□□□□□ -0.38
SEC13-203ENST00000383801 RNF220Q5VTB9 566 aa12.68□□□□□ -0.38
SEC13-203ENST00000383801 TMEM71Q6P5X7 295 aa12.68□□□□□ -0.38
SEC13-203ENST00000383801 FAM111BQ6SJ93 734 aa12.68□□□□□ -0.38
SEC13-203ENST00000383801 CD300LDQ6UXZ3 194 aa12.68□□□□□ -0.38
SEC13-203ENST00000383801 GALNT12Q8IXK2 581 aa12.68□□□□□ -0.38
SEC13-203ENST00000383801 OFCC1Q8IZS5 231 aa12.68□□□□□ -0.38
SEC13-203ENST00000383801 DEPDC4Q8N2C3 294 aa12.68□□□□□ -0.38
SEC13-203ENST00000383801 VWA5B2Q8N398 1253 aa12.68□□□□□ -0.38
SEC13-203ENST00000383801 CNDP2Q96KP4 475 aaKnown RBP12.68□□□□□ -0.38
SEC13-203ENST00000383801 PRRC1Q96M27 445 aa12.68□□□□□ -0.38
SEC13-203ENST00000383801 SDF2Q99470 211 aa12.68□□□□□ -0.38
SEC13-203ENST00000383801 BARD1Q99728 777 aaKnown RBP12.68□□□□□ -0.38
SEC13-203ENST00000383801 ARHGDIGQ99819 225 aa12.68□□□□□ -0.38
SEC13-203ENST00000383801 YIPF4Q9BSR8 244 aa12.68□□□□□ -0.38
SEC13-203ENST00000383801 LMF2Q9BU23 707 aaKnown RBP12.68□□□□□ -0.38
SEC13-203ENST00000383801 ZNF350Q9GZX5 532 aa12.68□□□□□ -0.38
SEC13-203ENST00000383801 ZNF768Q9H5H4 540 aaKnown RBP12.68□□□□□ -0.38
SEC13-203ENST00000383801 CXorf21Q9HAI6 301 aa12.68□□□□□ -0.38
SEC13-203ENST00000383801 VCX3AQ9NNX9 186 aa12.68□□□□□ -0.38
SEC13-203ENST00000383801 STARD5Q9NSY2 213 aa12.68□□□□□ -0.38
SEC13-203ENST00000383801 TPRKBQ9Y3C4 175 aa12.68□□□□□ -0.38
SEC13-203ENST00000383801 WDR45Q9Y484 360 aa12.68□□□□□ -0.38
SEC13-203ENST00000383801 FFAR1O14842 300 aa12.67□□□□□ -0.38
SEC13-203ENST00000383801 HRO43593 1189 aa12.67□□□□□ -0.38
SEC13-203ENST00000383801 PCDHGA12O60330 932 aa12.67□□□□□ -0.38
SEC13-203ENST00000383801 MPZL2O60487 215 aa12.67□□□□□ -0.38
SEC13-203ENST00000383801 DBIP07108 87 aaKnown RBP12.67□□□□□ -0.38
SEC13-203ENST00000383801 ANKRD34CP0C6C1 535 aa12.67□□□□□ -0.38
SEC13-203ENST00000383801 ATP6V1B1P15313 513 aa12.67□□□□□ -0.38
SEC13-203ENST00000383801 NELFEP18615 380 aaKnown RBP12.67□□□□□ -0.38
SEC13-203ENST00000383801 TNFRSF1BP20333 461 aa12.67□□□□□ -0.38
SEC13-203ENST00000383801 CBLP22681 906 aa12.67□□□□□ -0.38
SEC13-203ENST00000383801 IFNGR2P38484 337 aa12.67□□□□□ -0.38
SEC13-203ENST00000383801 STT3AP46977 705 aa12.67□□□□□ -0.38
SEC13-203ENST00000383801 GCGRP47871 477 aa12.67□□□□□ -0.38
SEC13-203ENST00000383801 CLK3P49761 638 aaKnown RBP12.67□□□□□ -0.38
SEC13-203ENST00000383801 RPP38P78345 283 aaKnown RBP12.67□□□□□ -0.38
SEC13-203ENST00000383801 BNC1Q01954 994 aa12.67□□□□□ -0.38
SEC13-203ENST00000383801 CHRNEQ04844 493 aa12.67□□□□□ -0.38
SEC13-203ENST00000383801 CD47Q08722 323 aa12.67□□□□□ -0.38
SEC13-203ENST00000383801 SLC13A2Q13183 592 aa12.67□□□□□ -0.38
SEC13-203ENST00000383801 CDK5R2Q13319 367 aa12.67□□□□□ -0.38
SEC13-203ENST00000383801 NR0B2Q15466 257 aa12.67□□□□□ -0.38
SEC13-203ENST00000383801 ZNHIT3Q15649 155 aaPredicted RBP12.67□□□□□ -0.38
SEC13-203ENST00000383801 BROXQ5VW32 411 aa12.67□□□□□ -0.38
SEC13-203ENST00000383801 MLIPQ5VWP3 458 aa12.67□□□□□ -0.38
SEC13-203ENST00000383801 ZNF770Q6IQ21 691 aaPredicted RBP12.67□□□□□ -0.38
SEC13-203ENST00000383801 ZNF773Q6PK81 442 aa12.67□□□□□ -0.38
SEC13-203ENST00000383801 FRRS1Q6ZNA5 592 aa12.67□□□□□ -0.38
SEC13-203ENST00000383801 GPR135Q8IZ08 494 aa12.67□□□□□ -0.38
SEC13-203ENST00000383801 SLC5A8Q8N695 610 aa12.67□□□□□ -0.38
SEC13-203ENST00000383801 TMEM52Q8NDY8 209 aa12.67□□□□□ -0.38
SEC13-203ENST00000383801 OR52P1PQ8NH57 321 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms