RNA–Protein interactions for RNA: ENST00000379143.9

PCNA-201, Transcript of proliferating cell nuclear antigen, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCNA, Length 1,344 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNA-201ENST00000379143 SIMC1Q8NDZ2 872 aa11.02□□□□□ -0.65
PCNA-201ENST00000379143 OR4A15Q8NGL6 344 aa11.02□□□□□ -0.65
PCNA-201ENST00000379143 SFXN5Q8TD22 340 aa11.02□□□□□ -0.65
PCNA-201ENST00000379143 TMEM125Q96AQ2 219 aa11.02□□□□□ -0.65
PCNA-201ENST00000379143 FAM120BQ96EK7 910 aaKnown RBP11.02□□□□□ -0.65
PCNA-201ENST00000379143 SGCZQ96LD1 299 aa11.02□□□□□ -0.65
PCNA-201ENST00000379143 VSTM2LQ96N03 204 aa11.02□□□□□ -0.65
PCNA-201ENST00000379143 PANX1Q96RD7 426 aa11.02□□□□□ -0.65
PCNA-201ENST00000379143 ITPAQ9BY32 194 aa11.02□□□□□ -0.65
PCNA-201ENST00000379143 NXF5Q9H1B4 397 aaKnown RBP11.02□□□□□ -0.65
PCNA-201ENST00000379143 ZNF385DQ9H6B1 395 aa11.02□□□□□ -0.65
PCNA-201ENST00000379143 CXorf36Q9H7Y0 433 aa11.02□□□□□ -0.65
PCNA-201ENST00000379143 LIN28AQ9H9Z2 209 aaKnown RBP11.02□□□□□ -0.65
PCNA-201ENST00000379143 FOLH1BQ9HBA9 442 aa11.02□□□□□ -0.65
PCNA-201ENST00000379143 SIRT3Q9NTG7 399 aaPredicted RBP11.02□□□□□ -0.65
PCNA-201ENST00000379143 HPF1Q9NWY4 346 aa11.02□□□□□ -0.65
PCNA-201ENST00000379143 PLA2G3Q9NZ20 509 aa11.02□□□□□ -0.65
PCNA-201ENST00000379143 CCDC167Q9P0B6 97 aa11.02□□□□□ -0.65
PCNA-201ENST00000379143 ANAPC2Q9UJX6 822 aa11.02□□□□□ -0.65
PCNA-201ENST00000379143 ERVK-11Q9UQG0 969 aa11.02□□□□□ -0.65
PCNA-201ENST00000379143 DTX4Q9Y2E6 619 aa11.02□□□□□ -0.65
PCNA-201ENST00000379143 GPR55Q9Y2T6 319 aaPredicted RBP11.02□□□□□ -0.65
PCNA-201ENST00000379143 TNRC6AQ8NDV7 1962 aaKnown RBP11.01□□□□□ -0.65
PCNA-201ENST00000379143 CCDC154A6NI56 674 aa11.01□□□□□ -0.65
PCNA-201ENST00000379143 NADKO95544 446 aaPredicted RBP11.01□□□□□ -0.65
PCNA-201ENST00000379143 ABCB1P08183 1280 aaPredicted RBP11.01□□□□□ -0.65
PCNA-201ENST00000379143 KRT16P08779 473 aa11.01□□□□□ -0.65
PCNA-201ENST00000379143 UQCRC2P22695 453 aa11.01□□□□□ -0.65
PCNA-201ENST00000379143 ADSLP30566 484 aaPredicted RBP11.01□□□□□ -0.65
PCNA-201ENST00000379143 SOAT1P35610 550 aa11.01□□□□□ -0.65
PCNA-201ENST00000379143 SOX3P41225 446 aa11.01□□□□□ -0.65
PCNA-201ENST00000379143 CD97P48960 835 aa11.01□□□□□ -0.65
PCNA-201ENST00000379143 ZNF155Q12901 538 aaPredicted RBP11.01□□□□□ -0.65
PCNA-201ENST00000379143 NFATC3Q12968 1075 aa11.01□□□□□ -0.65
PCNA-201ENST00000379143 ZNF169Q14929 603 aaPredicted RBP11.01□□□□□ -0.65
PCNA-201ENST00000379143 OR1C1Q15619 314 aa11.01□□□□□ -0.65
PCNA-201ENST00000379143 AGKQ53H12 422 aa11.01□□□□□ -0.65
PCNA-201ENST00000379143 SLC6A19Q695T7 634 aa11.01□□□□□ -0.65
PCNA-201ENST00000379143 BLOC1S3Q6QNY0 202 aa11.01□□□□□ -0.65
PCNA-201ENST00000379143 IL20RBQ6UXL0 311 aa11.01□□□□□ -0.65
PCNA-201ENST00000379143 C16orf47Q6ZP98 133 aaPredicted RBP11.01□□□□□ -0.65
PCNA-201ENST00000379143 ANKRD46Q86W74 232 aa11.01□□□□□ -0.65
PCNA-201ENST00000379143 CPSF7Q8N684 471 aaKnown RBP11.01□□□□□ -0.65
PCNA-201ENST00000379143 GOLM1Q8NBJ4 401 aa11.01□□□□□ -0.65
PCNA-201ENST00000379143 TMEM178AQ8NBL3 297 aa11.01□□□□□ -0.65
PCNA-201ENST00000379143 OR9I1Q8NGQ6 314 aa11.01□□□□□ -0.65
PCNA-201ENST00000379143 GOT1L1Q8NHS2 421 aaPredicted RBP11.01□□□□□ -0.65
PCNA-201ENST00000379143 TSPEARQ8WU66 669 aa11.01□□□□□ -0.65
PCNA-201ENST00000379143 C10orf82Q8WW14 230 aa11.01□□□□□ -0.65
PCNA-201ENST00000379143 ITCHQ96J02 903 aa11.01□□□□□ -0.65
PCNA-201ENST00000379143 C5orf34Q96MH7 638 aa11.01□□□□□ -0.65
PCNA-201ENST00000379143 ELAC2Q9BQ52 826 aaKnown RBP11.01□□□□□ -0.65
PCNA-201ENST00000379143 LMF2Q9BU23 707 aaKnown RBP11.01□□□□□ -0.65
PCNA-201ENST00000379143 Q9N2J8 555 aa11.01□□□□□ -0.65
PCNA-201ENST00000379143 ANKRD10Q9NXR5 420 aa11.01□□□□□ -0.65
PCNA-201ENST00000379143 MRTO4Q9UKD2 239 aaKnown RBP11.01□□□□□ -0.65
PCNA-201ENST00000379143 NPFFR2Q9Y5X5 522 aa11.01□□□□□ -0.65
PCNA-201ENST00000379143 RNF103-CHMP3A0A140T963 221 aa11□□□□□ -0.65
PCNA-201ENST00000379143 C9JVG2 144 aa11□□□□□ -0.65
PCNA-201ENST00000379143 RFXANKO14593 260 aa11□□□□□ -0.65
PCNA-201ENST00000379143 TP53I11O14683 189 aa11□□□□□ -0.65
PCNA-201ENST00000379143 SNX3O60493 162 aa11□□□□□ -0.65
PCNA-201ENST00000379143 CCDC22O60826 627 aa11□□□□□ -0.65
PCNA-201ENST00000379143 SLC25A12O75746 678 aa11□□□□□ -0.65
PCNA-201ENST00000379143 NEURL1O76050 574 aa11□□□□□ -0.65
PCNA-201ENST00000379143 OR6B1O95007 311 aa11□□□□□ -0.65
PCNA-201ENST00000379143 CPSF4O95639 269 aaKnown RBP11□□□□□ -0.65
PCNA-201ENST00000379143 F10P00742 488 aa11□□□□□ -0.65
PCNA-201ENST00000379143 HMGN2P05204 90 aaKnown RBP11□□□□□ -0.65
PCNA-201ENST00000379143 SP1P08047 785 aa11□□□□□ -0.65
PCNA-201ENST00000379143 FBXO45P0C2W1 286 aa11□□□□□ -0.65
PCNA-201ENST00000379143 CT45A8P0DMV1 189 aa11□□□□□ -0.65
PCNA-201ENST00000379143 CT45A9P0DMV2 189 aa11□□□□□ -0.65
PCNA-201ENST00000379143 DRD4P21917 467 aa11□□□□□ -0.65
PCNA-201ENST00000379143 ABCD3P28288 659 aa11□□□□□ -0.65
PCNA-201ENST00000379143 KRT20P35900 424 aa11□□□□□ -0.65
PCNA-201ENST00000379143 ZFP36L2P47974 494 aaKnown RBP11□□□□□ -0.65
PCNA-201ENST00000379143 TRPC1P48995 793 aa11□□□□□ -0.65
PCNA-201ENST00000379143 RPP38P78345 283 aaKnown RBP11□□□□□ -0.65
PCNA-201ENST00000379143 PSG6Q00889 435 aa11□□□□□ -0.65
PCNA-201ENST00000379143 PLCXD2Q0VAA5 305 aa11□□□□□ -0.65
PCNA-201ENST00000379143 SF3A3Q12874 501 aaKnown RBP eCLIP11□□□□□ -0.65
PCNA-201ENST00000379143 TP53BP2Q13625 1128 aa11□□□□□ -0.65
PCNA-201ENST00000379143 INAQ16352 499 aa11□□□□□ -0.65
PCNA-201ENST00000379143 ZNF791Q3KP31 576 aaPredicted RBP11□□□□□ -0.65
PCNA-201ENST00000379143 NADK2Q4G0N4 442 aa11□□□□□ -0.65
PCNA-201ENST00000379143 CYP27C1Q4G0S4 372 aa11□□□□□ -0.65
PCNA-201ENST00000379143 TIGD2Q4W5G0 525 aa11□□□□□ -0.65
PCNA-201ENST00000379143 CT45A2Q5DJT8 189 aa11□□□□□ -0.65
PCNA-201ENST00000379143 ZNF468Q5VIY5 522 aaPredicted RBP11□□□□□ -0.65
PCNA-201ENST00000379143 MFSD12Q6NUT3 480 aa11□□□□□ -0.65
PCNA-201ENST00000379143 RPUSD3Q6P087 351 aaKnown RBP11□□□□□ -0.65
PCNA-201ENST00000379143 RTL4Q6ZR62 310 aa11□□□□□ -0.65
PCNA-201ENST00000379143 PTRH1Q86Y79 214 aaKnown RBP11□□□□□ -0.65
PCNA-201ENST00000379143 FUNDC1Q8IVP5 155 aa11□□□□□ -0.65
PCNA-201ENST00000379143 MDS2Q8NDY4 140 aa11□□□□□ -0.65
PCNA-201ENST00000379143 CATSPER1Q8NEC5 780 aa11□□□□□ -0.65
PCNA-201ENST00000379143 HOXB13Q92826 284 aaPredicted RBP11□□□□□ -0.65
PCNA-201ENST00000379143 SPACA9Q96E40 222 aaPredicted RBP11□□□□□ -0.65
PCNA-201ENST00000379143 SPDL1Q96EA4 605 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms