RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 LINGO2Q7L985 606 aa11.2□□□□□ -0.62
NPHP4-202ENST00000378161 DNAAF1Q8NEP3 725 aa11.2□□□□□ -0.62
NPHP4-202ENST00000378161 OR2A12Q8NGT7 310 aa11.2□□□□□ -0.62
NPHP4-202ENST00000378161 SLC35F5Q8WV83 523 aa11.2□□□□□ -0.62
NPHP4-202ENST00000378161 C22orf15Q8WYQ4 148 aa11.2□□□□□ -0.62
NPHP4-202ENST00000378161 NTAN1Q96AB6 310 aa11.2□□□□□ -0.62
NPHP4-202ENST00000378161 SLC41A3Q96GZ6 507 aa11.2□□□□□ -0.62
NPHP4-202ENST00000378161 LRIG1Q96JA1 1093 aa11.2□□□□□ -0.62
NPHP4-202ENST00000378161 NMRK2Q9NPI5 230 aa11.2□□□□□ -0.62
NPHP4-202ENST00000378161 SIX4Q9UIU6 781 aa11.2□□□□□ -0.62
NPHP4-202ENST00000378161 LOC285095A0A1B0GVY8 99 aa11.2□□□□□ -0.62
NPHP4-202ENST00000378161 ZNF670-ZNF695F2Z2N8 137 aa11.2□□□□□ -0.62
NPHP4-202ENST00000378161 CACNG3O60359 315 aa11.2□□□□□ -0.62
NPHP4-202ENST00000378161 CPSF4O95639 269 aaKnown RBP11.2□□□□□ -0.62
NPHP4-202ENST00000378161 IRF1P10914 325 aa11.2□□□□□ -0.62
NPHP4-202ENST00000378161 CPN1P15169 458 aa11.2□□□□□ -0.62
NPHP4-202ENST00000378161 GABRB1P18505 474 aa11.2□□□□□ -0.62
NPHP4-202ENST00000378161 FGF7P21781 194 aa11.2□□□□□ -0.62
NPHP4-202ENST00000378161 TTPAP49638 278 aa11.2□□□□□ -0.62
NPHP4-202ENST00000378161 PRKXP51817 358 aa11.2□□□□□ -0.62
NPHP4-202ENST00000378161 ZNF252P-AS1Q0IIN9 211 aa11.2□□□□□ -0.62
NPHP4-202ENST00000378161 GPR176Q14439 515 aa11.2□□□□□ -0.62
NPHP4-202ENST00000378161 GCNT6Q5T4J0 391 aa11.2□□□□□ -0.62
NPHP4-202ENST00000378161 GPC2Q8N158 579 aa11.2□□□□□ -0.62
NPHP4-202ENST00000378161 ADPRHL1Q8NDY3 354 aa11.2□□□□□ -0.62
NPHP4-202ENST00000378161 CLEC4CQ8WTT0 213 aa11.2□□□□□ -0.62
NPHP4-202ENST00000378161 SUV39H2Q9H5I1 410 aa11.2□□□□□ -0.62
NPHP4-202ENST00000378161 MINDY3Q9H8M7 445 aa11.2□□□□□ -0.62
NPHP4-202ENST00000378161 PSORS1C1Q9UIG5 152 aa11.2□□□□□ -0.62
NPHP4-202ENST00000378161 KCNMB2Q9Y691 235 aa11.2□□□□□ -0.62
NPHP4-202ENST00000378161 MYH14Q7Z406 1995 aaKnown RBP11.2□□□□□ -0.62
NPHP4-202ENST00000378161 LOC100509620A0A075B734 347 aa11.19□□□□□ -0.62
NPHP4-202ENST00000378161 SEC61A1P61619 476 aaKnown RBP11.19□□□□□ -0.62
NPHP4-202ENST00000378161 AFMIDQ63HM1 303 aa11.19□□□□□ -0.62
NPHP4-202ENST00000378161 SFRP4Q6FHJ7 346 aaPredicted RBP11.19□□□□□ -0.62
NPHP4-202ENST00000378161 KIAA0930Q6ICG6 404 aaPredicted RBP11.19□□□□□ -0.62
NPHP4-202ENST00000378161 CXorf57Q6NSI4 855 aaKnown RBP11.19□□□□□ -0.62
NPHP4-202ENST00000378161 TRAPPC5Q8IUR0 188 aa11.19□□□□□ -0.62
NPHP4-202ENST00000378161 DUSP18Q8NEJ0 188 aa11.19□□□□□ -0.62
NPHP4-202ENST00000378161 MARCH2Q9P0N8 246 aa11.19□□□□□ -0.62
NPHP4-202ENST00000378161 GIMAP2Q9UG22 337 aa11.19□□□□□ -0.62
NPHP4-202ENST00000378161 PISDQ9UG56 409 aa11.19□□□□□ -0.62
NPHP4-202ENST00000378161 ZMYM5Q9UJ78 669 aa11.19□□□□□ -0.62
NPHP4-202ENST00000378161 B4E171 279 aa11.19□□□□□ -0.62
NPHP4-202ENST00000378161 GPR171O14626 319 aa11.19□□□□□ -0.62
NPHP4-202ENST00000378161 SMAD9O15198 467 aaKnown RBP11.19□□□□□ -0.62
NPHP4-202ENST00000378161 TSPAN3O60637 253 aa11.19□□□□□ -0.62
NPHP4-202ENST00000378161 PAGE1O75459 146 aa11.19□□□□□ -0.62
NPHP4-202ENST00000378161 C22orf31O95567 290 aa11.19□□□□□ -0.62
NPHP4-202ENST00000378161 SMIM10L2AP0DMW4 78 aa11.19□□□□□ -0.62
NPHP4-202ENST00000378161 SMIM10L2BP0DMW5 78 aa11.19□□□□□ -0.62
NPHP4-202ENST00000378161 SOX3P41225 446 aa11.19□□□□□ -0.62
NPHP4-202ENST00000378161 TLE4Q04727 773 aa11.19□□□□□ -0.62
NPHP4-202ENST00000378161 GPR26Q8NDV2 337 aa11.19□□□□□ -0.62
NPHP4-202ENST00000378161 OR52J3Q8NH60 311 aa11.19□□□□□ -0.62
NPHP4-202ENST00000378161 DNASE1L2Q92874 299 aa11.19□□□□□ -0.62
NPHP4-202ENST00000378161 PEX11GQ96HA9 241 aa11.19□□□□□ -0.62
NPHP4-202ENST00000378161 MAGIXQ9H6Y5 334 aa11.19□□□□□ -0.62
NPHP4-202ENST00000378161 GOLGA2P5Q9HBQ8 144 aa11.19□□□□□ -0.62
NPHP4-202ENST00000378161 TUBG2Q9NRH3 451 aa11.19□□□□□ -0.62
NPHP4-202ENST00000378161 HEBP1Q9NRV9 189 aa11.19□□□□□ -0.62
NPHP4-202ENST00000378161 ACSS1Q9NUB1 689 aaPredicted RBP11.19□□□□□ -0.62
NPHP4-202ENST00000378161 ZIM2Q9NZV7 527 aa11.19□□□□□ -0.62
NPHP4-202ENST00000378161 IL17BQ9UHF5 180 aa11.19□□□□□ -0.62
NPHP4-202ENST00000378161 PLCH1Q4KWH8 1693 aa11.19□□□□□ -0.62
NPHP4-202ENST00000378161 TRBV23OR9-2A0A075B6M9 112 aa11.19□□□□□ -0.62
NPHP4-202ENST00000378161 NMBP08949 121 aa11.19□□□□□ -0.62
NPHP4-202ENST00000378161 UFM1P61960 85 aa11.19□□□□□ -0.62
NPHP4-202ENST00000378161 REEP5Q00765 189 aa11.19□□□□□ -0.62
NPHP4-202ENST00000378161 OR52W1Q6IF63 320 aa11.19□□□□□ -0.62
NPHP4-202ENST00000378161 OR4L1Q8NH43 312 aa11.19□□□□□ -0.62
NPHP4-202ENST00000378161 NEIL3Q8TAT5 605 aa11.19□□□□□ -0.62
NPHP4-202ENST00000378161 NEK7Q8TDX7 302 aa11.19□□□□□ -0.62
NPHP4-202ENST00000378161 PAQR8Q8TEZ7 354 aa11.19□□□□□ -0.62
NPHP4-202ENST00000378161 BTN2A2Q8WVV5 523 aa11.19□□□□□ -0.62
NPHP4-202ENST00000378161 MED9Q9NWA0 146 aa11.19□□□□□ -0.62
NPHP4-202ENST00000378161 RPS6KB2Q9UBS0 482 aa11.19□□□□□ -0.62
NPHP4-202ENST00000378161 FBXW11Q9UKB1 542 aa11.19□□□□□ -0.62
NPHP4-202ENST00000378161 SLC22A14Q9Y267 594 aa11.19□□□□□ -0.62
NPHP4-202ENST00000378161 F5H5P2 479 aa11.19□□□□□ -0.62
NPHP4-202ENST00000378161 SLC7A4O43246 635 aa11.19□□□□□ -0.62
NPHP4-202ENST00000378161 SC5DO75845 299 aa11.19□□□□□ -0.62
NPHP4-202ENST00000378161 ZNF432O94892 652 aa11.19□□□□□ -0.62
NPHP4-202ENST00000378161 GLUD1P00367 558 aa11.19□□□□□ -0.62
NPHP4-202ENST00000378161 CFDP00746 253 aaPredicted RBP11.19□□□□□ -0.62
NPHP4-202ENST00000378161 BCKDHAP12694 445 aa11.19□□□□□ -0.62
NPHP4-202ENST00000378161 IFNGR1P15260 489 aa11.19□□□□□ -0.62
NPHP4-202ENST00000378161 MSR1P21757 451 aa11.19□□□□□ -0.62
NPHP4-202ENST00000378161 PPP2R1BP30154 601 aa11.19□□□□□ -0.62
NPHP4-202ENST00000378161 DAOAP59103 153 aa11.19□□□□□ -0.62
NPHP4-202ENST00000378161 ZNF155Q12901 538 aaPredicted RBP11.19□□□□□ -0.62
NPHP4-202ENST00000378161 TDGQ13569 410 aa11.19□□□□□ -0.62
NPHP4-202ENST00000378161 MPEG1Q2M385 716 aa11.19□□□□□ -0.62
NPHP4-202ENST00000378161 NCMAPQ5T1S8 102 aa11.19□□□□□ -0.62
NPHP4-202ENST00000378161 ATPAF1Q5TC12 328 aaPredicted RBP11.19□□□□□ -0.62
NPHP4-202ENST00000378161 HACD4Q5VWC8 232 aa11.19□□□□□ -0.62
NPHP4-202ENST00000378161 ADNP2Q6IQ32 1131 aa11.19□□□□□ -0.62
NPHP4-202ENST00000378161 CLEC2AQ6UVW9 174 aa11.19□□□□□ -0.62
NPHP4-202ENST00000378161 ATRAIDQ6UW56 229 aa11.19□□□□□ -0.62
NPHP4-202ENST00000378161 ZNF621Q6ZSS3 439 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms