RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 HEMK1Q9Y5R4 338 aaPredicted RBP14.27□□□□□ -0.13
NPHP4-201ENST00000378156 ZNF670-ZNF695F2Z2N8 137 aa14.26□□□□□ -0.13
NPHP4-201ENST00000378156 S100A12P80511 92 aa14.26□□□□□ -0.13
NPHP4-201ENST00000378156 RGNQ15493 299 aa14.26□□□□□ -0.13
NPHP4-201ENST00000378156 TCEAL6Q6IPX3 200 aa14.26□□□□□ -0.13
NPHP4-201ENST00000378156 PLXDC1Q8IUK5 500 aa14.26□□□□□ -0.13
NPHP4-201ENST00000378156 SPARTQ8N0X7 666 aa14.26□□□□□ -0.13
NPHP4-201ENST00000378156 NEIL2Q969S2 332 aa14.26□□□□□ -0.13
NPHP4-201ENST00000378156 LMAN1LQ9HAT1 526 aa14.26□□□□□ -0.13
NPHP4-201ENST00000378156 SCP2D1Q9UJQ7 156 aa14.26□□□□□ -0.13
NPHP4-201ENST00000378156 DNMT3AQ9Y6K1 912 aaPredicted RBP14.26□□□□□ -0.13
NPHP4-201ENST00000378156 NUMA1Q14980 2115 aa14.26□□□□□ -0.13
NPHP4-201ENST00000378156 SOX1O00570 391 aaPredicted RBP14.26□□□□□ -0.13
NPHP4-201ENST00000378156 VILLO15195 856 aa14.26□□□□□ -0.13
NPHP4-201ENST00000378156 GADD45AP24522 165 aa14.26□□□□□ -0.13
NPHP4-201ENST00000378156 BMXP51813 675 aa14.26□□□□□ -0.13
NPHP4-201ENST00000378156 PLGLB1Q02325 96 aa14.26□□□□□ -0.13
NPHP4-201ENST00000378156 GRM7Q14831 915 aa14.26□□□□□ -0.13
NPHP4-201ENST00000378156 TTLL10Q6ZVT0 673 aa14.26□□□□□ -0.13
NPHP4-201ENST00000378156 OR6N1Q8NGY5 312 aa14.26□□□□□ -0.13
NPHP4-201ENST00000378156 DOK4Q8TEW6 326 aa14.26□□□□□ -0.13
NPHP4-201ENST00000378156 THEM6Q8WUY1 208 aa14.26□□□□□ -0.13
NPHP4-201ENST00000378156 BRF2Q9HAW0 419 aa14.26□□□□□ -0.13
NPHP4-201ENST00000378156 KCNK12Q9HB15 430 aa14.26□□□□□ -0.13
NPHP4-201ENST00000378156 PCDHA9Q9Y5H5 950 aa14.26□□□□□ -0.13
NPHP4-201ENST00000378156 LTBP4Q8N2S1 1624 aa14.26□□□□□ -0.13
NPHP4-201ENST00000378156 AK1P00568 194 aa14.26□□□□□ -0.13
NPHP4-201ENST00000378156 CSF2P04141 144 aa14.26□□□□□ -0.13
NPHP4-201ENST00000378156 RPL34P49207 117 aaKnown RBP14.26□□□□□ -0.13
NPHP4-201ENST00000378156 ZNF41P51814 821 aaPredicted RBP14.26□□□□□ -0.13
NPHP4-201ENST00000378156 CDK3Q00526 305 aa14.26□□□□□ -0.13
NPHP4-201ENST00000378156 HNRNPA0Q13151 305 aaKnown RBP14.26□□□□□ -0.13
NPHP4-201ENST00000378156 LRRC26Q2I0M4 334 aa14.26□□□□□ -0.13
NPHP4-201ENST00000378156 GXYLT1Q4G148 440 aa14.26□□□□□ -0.13
NPHP4-201ENST00000378156 CCBE1Q6UXH8 406 aaPredicted RBP14.26□□□□□ -0.13
NPHP4-201ENST00000378156 Q6ZSR9 355 aa14.26□□□□□ -0.13
NPHP4-201ENST00000378156 RBP7Q96R05 134 aa14.26□□□□□ -0.13
NPHP4-201ENST00000378156 NELL2Q99435 816 aa14.26□□□□□ -0.13
NPHP4-201ENST00000378156 ZFYVE21Q9BQ24 234 aa14.26□□□□□ -0.13
NPHP4-201ENST00000378156 CWH43Q9H720 699 aa14.26□□□□□ -0.13
NPHP4-201ENST00000378156 GORASP2Q9H8Y8 452 aa14.26□□□□□ -0.13
NPHP4-201ENST00000378156 CPNE5Q9HCH3 593 aa14.26□□□□□ -0.13
NPHP4-201ENST00000378156 C5AR2Q9P296 337 aa14.26□□□□□ -0.13
NPHP4-201ENST00000378156 NUMBLQ9Y6R0 609 aa14.26□□□□□ -0.13
NPHP4-201ENST00000378156 HSPE1-MOB4S4R3N1 261 aa14.26□□□□□ -0.13
NPHP4-201ENST00000378156 PHIPQ8WWQ0 1821 aa14.26□□□□□ -0.13
NPHP4-201ENST00000378156 ANHXE9PGG2 379 aa14.26□□□□□ -0.13
NPHP4-201ENST00000378156 TRAPPC6AO75865 159 aa14.26□□□□□ -0.13
NPHP4-201ENST00000378156 ATE1O95260 518 aa14.26□□□□□ -0.13
NPHP4-201ENST00000378156 EIF2S3LQ2VIR3 472 aaKnown RBP14.26□□□□□ -0.13
NPHP4-201ENST00000378156 ZNF761Q86XN6 746 aaPredicted RBP14.26□□□□□ -0.13
NPHP4-201ENST00000378156 SNX29P2Q8IUI4 249 aa14.26□□□□□ -0.13
NPHP4-201ENST00000378156 C7orf57Q8NEG2 295 aa14.26□□□□□ -0.13
NPHP4-201ENST00000378156 OR5J2Q8NH18 312 aa14.26□□□□□ -0.13
NPHP4-201ENST00000378156 ZDHHC1Q8WTX9 485 aa14.26□□□□□ -0.13
NPHP4-201ENST00000378156 TMEM234Q8WY98 164 aa14.26□□□□□ -0.13
NPHP4-201ENST00000378156 ECHDC3Q96DC8 303 aa14.26□□□□□ -0.13
NPHP4-201ENST00000378156 B3GNT4Q9C0J1 378 aa14.26□□□□□ -0.13
NPHP4-201ENST00000378156 NOP16Q9Y3C1 178 aaKnown RBP14.26□□□□□ -0.13
NPHP4-201ENST00000378156 ZNF195O14628 629 aa14.25□□□□□ -0.13
NPHP4-201ENST00000378156 ZNF20P17024 532 aa14.25□□□□□ -0.13
NPHP4-201ENST00000378156 FBLP22087 321 aaKnown RBP14.25□□□□□ -0.13
NPHP4-201ENST00000378156 GJA4P35212 333 aa14.25□□□□□ -0.13
NPHP4-201ENST00000378156 SGSHP51688 502 aa14.25□□□□□ -0.13
NPHP4-201ENST00000378156 FAM78AQ5JUQ0 283 aa14.25□□□□□ -0.13
NPHP4-201ENST00000378156 DUS1LQ6P1R4 473 aaKnown RBP14.25□□□□□ -0.13
NPHP4-201ENST00000378156 PNCKQ6P2M8 343 aa14.25□□□□□ -0.13
NPHP4-201ENST00000378156 RNF111Q6ZNA4 994 aa14.25□□□□□ -0.13
NPHP4-201ENST00000378156 UBQLNLQ8IYU4 475 aa14.25□□□□□ -0.13
NPHP4-201ENST00000378156 OR51A7Q8NH64 312 aa14.25□□□□□ -0.13
NPHP4-201ENST00000378156 MSANTD3Q96H12 275 aa14.25□□□□□ -0.13
NPHP4-201ENST00000378156 TMEM19Q96HH6 336 aa14.25□□□□□ -0.13
NPHP4-201ENST00000378156 DEFB126Q9BYW3 111 aa14.25□□□□□ -0.13
NPHP4-201ENST00000378156 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.25□□□□□ -0.13
NPHP4-201ENST00000378156 HYKKA2RU49 373 aa14.25□□□□□ -0.13
NPHP4-201ENST00000378156 KIAA0513O60268 411 aa14.25□□□□□ -0.13
NPHP4-201ENST00000378156 ABLIM3O94929 683 aa14.25□□□□□ -0.13
NPHP4-201ENST00000378156 AOAHP28039 575 aa14.25□□□□□ -0.13
NPHP4-201ENST00000378156 OPRL1P41146 370 aa14.25□□□□□ -0.13
NPHP4-201ENST00000378156 SLC6A9P48067 706 aa14.25□□□□□ -0.13
NPHP4-201ENST00000378156 CTBP2P56545 445 aa14.25□□□□□ -0.13
NPHP4-201ENST00000378156 PNLDC1Q8NA58 520 aaKnown RBP14.25□□□□□ -0.13
NPHP4-201ENST00000378156 CCDC54Q8NEL0 328 aa14.25□□□□□ -0.13
NPHP4-201ENST00000378156 OR9Q2Q8NGE9 314 aa14.25□□□□□ -0.13
NPHP4-201ENST00000378156 OR2A12Q8NGT7 310 aa14.25□□□□□ -0.13
NPHP4-201ENST00000378156 GAL3ST3Q96A11 431 aa14.25□□□□□ -0.13
NPHP4-201ENST00000378156 CCDC32Q9BV29 185 aa14.25□□□□□ -0.13
NPHP4-201ENST00000378156 NAA50Q9GZZ1 169 aaKnown RBP14.25□□□□□ -0.13
NPHP4-201ENST00000378156 MCCC2Q9HCC0 563 aa14.25□□□□□ -0.13
NPHP4-201ENST00000378156 RABL2AQ9UBK7 228 aaPredicted RBP14.25□□□□□ -0.13
NPHP4-201ENST00000378156 RABL2BQ9UNT1 228 aa14.25□□□□□ -0.13
NPHP4-201ENST00000378156 ENTPD2Q9Y5L3 495 aa14.25□□□□□ -0.13
NPHP4-201ENST00000378156 PRAMEF26H0Y7S4 382 aa14.25□□□□□ -0.13
NPHP4-201ENST00000378156 PSMD9O00233 223 aa14.25□□□□□ -0.13
NPHP4-201ENST00000378156 GPR37L1O60883 481 aa14.25□□□□□ -0.13
NPHP4-201ENST00000378156 MT-ND5P03915 603 aa14.25□□□□□ -0.13
NPHP4-201ENST00000378156 LHCGRP22888 699 aa14.25□□□□□ -0.13
NPHP4-201ENST00000378156 PPP5CP53041 499 aa14.25□□□□□ -0.13
NPHP4-201ENST00000378156 CLDN2P57739 230 aa14.25□□□□□ -0.13
NPHP4-201ENST00000378156 SHC2P98077 582 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms