RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 TMED5Q9Y3A6 229 aa15.43■□□□□ 0.06
HMGN4-201ENST00000377575 DNAJC15Q9Y5T4 150 aa15.43■□□□□ 0.06
HMGN4-201ENST00000377575 CELSR2Q9HCU4 2923 aa15.43■□□□□ 0.06
HMGN4-201ENST00000377575 HNRNPRO43390 633 aaKnown RBP15.42■□□□□ 0.06
HMGN4-201ENST00000377575 TYROBPO43914 113 aa15.42■□□□□ 0.06
HMGN4-201ENST00000377575 ERN1O75460 977 aaKnown RBP15.42■□□□□ 0.06
HMGN4-201ENST00000377575 JUNP05412 331 aaKnown RBP15.42■□□□□ 0.06
HMGN4-201ENST00000377575 FGF4P08620 206 aa15.42■□□□□ 0.06
HMGN4-201ENST00000377575 RFPL3SP0C7P2 107 aa15.42■□□□□ 0.06
HMGN4-201ENST00000377575 KRT20P35900 424 aa15.42■□□□□ 0.06
HMGN4-201ENST00000377575 CASP3P42574 277 aa15.42■□□□□ 0.06
HMGN4-201ENST00000377575 RPL38P63173 70 aaKnown RBP15.42■□□□□ 0.06
HMGN4-201ENST00000377575 ZNF155Q12901 538 aaPredicted RBP15.42■□□□□ 0.06
HMGN4-201ENST00000377575 KIAA0040Q15053 153 aa15.42■□□□□ 0.06
HMGN4-201ENST00000377575 ARL13AQ5H913 290 aaPredicted RBP15.42■□□□□ 0.06
HMGN4-201ENST00000377575 SH2D4BQ5SQS7 431 aa15.42■□□□□ 0.06
HMGN4-201ENST00000377575 WLSQ5T9L3 541 aa15.42■□□□□ 0.06
HMGN4-201ENST00000377575 BICRALQ6AI39 1079 aa15.42■□□□□ 0.06
HMGN4-201ENST00000377575 ZCCHC23Q6ZST2 131 aa15.42■□□□□ 0.06
HMGN4-201ENST00000377575 CLYBLQ8N0X4 340 aa15.42■□□□□ 0.06
HMGN4-201ENST00000377575 OR7G2Q8NG99 324 aa15.42■□□□□ 0.06
HMGN4-201ENST00000377575 TMEM41AQ96HV5 264 aa15.42■□□□□ 0.06
HMGN4-201ENST00000377575 FCRL1Q96LA6 429 aa15.42■□□□□ 0.06
HMGN4-201ENST00000377575 OSBPL11Q9BXB4 747 aa15.42■□□□□ 0.06
HMGN4-201ENST00000377575 RUBCNLQ9H714 662 aa15.42■□□□□ 0.06
HMGN4-201ENST00000377575 FOLH1BQ9HBA9 442 aa15.42■□□□□ 0.06
HMGN4-201ENST00000377575 ACKR4Q9NPB9 350 aa15.42■□□□□ 0.06
HMGN4-201ENST00000377575 PNPLA3Q9NST1 481 aa15.42■□□□□ 0.06
HMGN4-201ENST00000377575 KLRF1Q9NZS2 232 aa15.42■□□□□ 0.06
HMGN4-201ENST00000377575 ACAD8Q9UKU7 415 aa15.42■□□□□ 0.06
HMGN4-201ENST00000377575 GPR55Q9Y2T6 319 aaPredicted RBP15.42■□□□□ 0.06
HMGN4-201ENST00000377575 TRAF6Q9Y4K3 522 aa15.42■□□□□ 0.06
HMGN4-201ENST00000377575 ARHGAP21Q5T5U3 1957 aa15.42■□□□□ 0.06
HMGN4-201ENST00000377575 CACNA1DQ01668 2161 aa15.41■□□□□ 0.06
HMGN4-201ENST00000377575 A0A087WV62 115 aa15.41■□□□□ 0.06
HMGN4-201ENST00000377575 OR6C70A6NIJ9 312 aa15.41■□□□□ 0.06
HMGN4-201ENST00000377575 LSM1O15116 133 aaKnown RBP15.41■□□□□ 0.06
HMGN4-201ENST00000377575 WDR1O75083 606 aa15.41■□□□□ 0.06
HMGN4-201ENST00000377575 BPGMP07738 259 aa15.41■□□□□ 0.06
HMGN4-201ENST00000377575 LINC00032P0C843 101 aa15.41■□□□□ 0.06
HMGN4-201ENST00000377575 ELAVL4P26378 380 aaKnown RBP15.41■□□□□ 0.06
HMGN4-201ENST00000377575 ACVR2AP27037 513 aa15.41■□□□□ 0.06
HMGN4-201ENST00000377575 SNTA1Q13424 505 aa15.41■□□□□ 0.06
HMGN4-201ENST00000377575 GXYLT1Q4G148 440 aa15.41■□□□□ 0.06
HMGN4-201ENST00000377575 EMC4Q5J8M3 183 aa15.41■□□□□ 0.06
HMGN4-201ENST00000377575 SP5Q6BEB4 398 aaPredicted RBP15.41■□□□□ 0.06
HMGN4-201ENST00000377575 SLC30A6Q6NXT4 461 aa15.41■□□□□ 0.06
HMGN4-201ENST00000377575 TMEM107Q6UX40 140 aa15.41■□□□□ 0.06
HMGN4-201ENST00000377575 Q6ZSR9 355 aa15.41■□□□□ 0.06
HMGN4-201ENST00000377575 ACAD11Q709F0 780 aa15.41■□□□□ 0.06
HMGN4-201ENST00000377575 OR5M9Q8NGP3 310 aa15.41■□□□□ 0.06
HMGN4-201ENST00000377575 OR2T11Q8NH01 316 aa15.41■□□□□ 0.06
HMGN4-201ENST00000377575 CA5BP1Q8WTZ4 195 aa15.41■□□□□ 0.06
HMGN4-201ENST00000377575 HGDQ93099 445 aa15.41■□□□□ 0.06
HMGN4-201ENST00000377575 MARVELD3Q96A59 401 aa15.41■□□□□ 0.06
HMGN4-201ENST00000377575 SDCCAG3Q96C92 435 aa15.41■□□□□ 0.06
HMGN4-201ENST00000377575 TMCO6Q96DC7 493 aa15.41■□□□□ 0.06
HMGN4-201ENST00000377575 ZNF764Q96H86 408 aaPredicted RBP15.41■□□□□ 0.06
HMGN4-201ENST00000377575 VSTM2LQ96N03 204 aa15.41■□□□□ 0.06
HMGN4-201ENST00000377575 TUBB1Q9H4B7 451 aa15.41■□□□□ 0.06
HMGN4-201ENST00000377575 ANKRA2Q9H9E1 313 aa15.41■□□□□ 0.06
HMGN4-201ENST00000377575 C15orf41Q9Y2V0 281 aa15.41■□□□□ 0.06
HMGN4-201ENST00000377575 PRAMEF25A6NGN4 478 aa15.4■□□□□ 0.06
HMGN4-201ENST00000377575 TMEM233B4DJY2 109 aa15.4■□□□□ 0.06
HMGN4-201ENST00000377575 PIP5K1BO14986 540 aa15.4■□□□□ 0.06
HMGN4-201ENST00000377575 PDPK1O15530 556 aa15.4■□□□□ 0.06
HMGN4-201ENST00000377575 CTIFO43310 598 aaKnown RBP15.4■□□□□ 0.06
HMGN4-201ENST00000377575 CT45A8P0DMV1 189 aa15.4■□□□□ 0.06
HMGN4-201ENST00000377575 CT45A9P0DMV2 189 aa15.4■□□□□ 0.06
HMGN4-201ENST00000377575 CREB1P16220 341 aa15.4■□□□□ 0.06
HMGN4-201ENST00000377575 DDX5P17844 614 aaKnown RBP15.4■□□□□ 0.06
HMGN4-201ENST00000377575 SDC1P18827 310 aa15.4■□□□□ 0.06
HMGN4-201ENST00000377575 TACR1P25103 407 aa15.4■□□□□ 0.06
HMGN4-201ENST00000377575 MAPK1P28482 360 aa15.4■□□□□ 0.06
HMGN4-201ENST00000377575 GRNP28799 593 aaKnown RBP15.4■□□□□ 0.06
HMGN4-201ENST00000377575 IL12BP29460 328 aa15.4■□□□□ 0.06
HMGN4-201ENST00000377575 MC3RP41968 323 aa15.4■□□□□ 0.06
HMGN4-201ENST00000377575 ASMTP46597 345 aa15.4■□□□□ 0.06
HMGN4-201ENST00000377575 CORO7P57737 925 aa15.4■□□□□ 0.06
HMGN4-201ENST00000377575 GALNTL6Q49A17 601 aa15.4■□□□□ 0.06
HMGN4-201ENST00000377575 CT45A2Q5DJT8 189 aa15.4■□□□□ 0.06
HMGN4-201ENST00000377575 ZNF585AQ6P3V2 769 aa15.4■□□□□ 0.06
HMGN4-201ENST00000377575 CROCCP2Q86T23 111 aa15.4■□□□□ 0.06
HMGN4-201ENST00000377575 MARVELD2Q8N4S9 558 aa15.4■□□□□ 0.06
HMGN4-201ENST00000377575 PPP1R14CQ8TAE6 165 aa15.4■□□□□ 0.06
HMGN4-201ENST00000377575 NEIL3Q8TAT5 605 aa15.4■□□□□ 0.06
HMGN4-201ENST00000377575 AGR3Q8TD06 166 aa15.4■□□□□ 0.06
HMGN4-201ENST00000377575 ASB5Q8WWX0 329 aa15.4■□□□□ 0.06
HMGN4-201ENST00000377575 RND1Q92730 232 aa15.4■□□□□ 0.06
HMGN4-201ENST00000377575 TMBIM1Q969X1 311 aa15.4■□□□□ 0.06
HMGN4-201ENST00000377575 AMDHD1Q96NU7 426 aa15.4■□□□□ 0.06
HMGN4-201ENST00000377575 COL21A1Q96P44 957 aa15.4■□□□□ 0.06
HMGN4-201ENST00000377575 SLC6A15Q9H2J7 730 aa15.4■□□□□ 0.06
HMGN4-201ENST00000377575 GLIPR2Q9H4G4 154 aa15.4■□□□□ 0.06
HMGN4-201ENST00000377575 SSU72Q9NP77 194 aaKnown RBP15.4■□□□□ 0.06
HMGN4-201ENST00000377575 DDX18Q9NVP1 670 aaKnown RBP15.4■□□□□ 0.06
HMGN4-201ENST00000377575 SPRR3Q9UBC9 169 aa15.4■□□□□ 0.06
HMGN4-201ENST00000377575 EXO1Q9UQ84 846 aaKnown RBP15.4■□□□□ 0.06
HMGN4-201ENST00000377575 OR10H1Q9Y4A9 318 aa15.4■□□□□ 0.06
HMGN4-201ENST00000377575 TMEM114B3SHH9 223 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms