RNA–Protein interactions for RNA: ENST00000375820.8

COL4A1-201, Transcript of collagen type IV alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A1, Length 6,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-201ENST00000375820 TIFABQ6ZNK6 161 aa13.04□□□□□ -0.32
COL4A1-201ENST00000375820 AVL9Q8NBF6 648 aa13.04□□□□□ -0.32
COL4A1-201ENST00000375820 MTMR14Q8NCE2 650 aa13.04□□□□□ -0.32
COL4A1-201ENST00000375820 TCEAL4Q96EI5 215 aa13.04□□□□□ -0.32
COL4A1-201ENST00000375820 APIPQ96GX9 242 aa13.04□□□□□ -0.32
COL4A1-201ENST00000375820 SULT4A1Q9BR01 284 aa13.04□□□□□ -0.32
COL4A1-201ENST00000375820 MYO5BQ9ULV0 1848 aa13.04□□□□□ -0.32
COL4A1-201ENST00000375820 LAMTOR5O43504 91 aa13.04□□□□□ -0.32
COL4A1-201ENST00000375820 PNMTP11086 282 aa13.04□□□□□ -0.32
COL4A1-201ENST00000375820 EIF2B1Q14232 305 aaKnown RBP13.04□□□□□ -0.32
COL4A1-201ENST00000375820 CCDC28AQ8IWP9 274 aa13.04□□□□□ -0.32
COL4A1-201ENST00000375820 SCML4Q8N228 414 aa13.04□□□□□ -0.32
COL4A1-201ENST00000375820 FKBP10Q96AY3 582 aa13.04□□□□□ -0.32
COL4A1-201ENST00000375820 TMEM19Q96HH6 336 aa13.04□□□□□ -0.32
COL4A1-201ENST00000375820 USP36Q9P275 1121 aaKnown RBP13.04□□□□□ -0.32
COL4A1-201ENST00000375820 MED16Q9Y2X0 877 aa13.04□□□□□ -0.32
COL4A1-201ENST00000375820 TRAV18A0A075B6X5 111 aa13.03□□□□□ -0.32
COL4A1-201ENST00000375820 HOXB9P17482 250 aaPredicted RBP13.03□□□□□ -0.32
COL4A1-201ENST00000375820 CERS1P27544 350 aa13.03□□□□□ -0.32
COL4A1-201ENST00000375820 PRKXP51817 358 aa13.03□□□□□ -0.32
COL4A1-201ENST00000375820 ART1P52961 327 aa13.03□□□□□ -0.32
COL4A1-201ENST00000375820 DYRK1AQ13627 763 aa13.03□□□□□ -0.32
COL4A1-201ENST00000375820 ATG9BQ674R7 924 aa13.03□□□□□ -0.32
COL4A1-201ENST00000375820 LARP4Q71RC2 724 aaKnown RBP eCLIP13.03□□□□□ -0.32
COL4A1-201ENST00000375820 KLHDC8AQ8IYD2 350 aa13.03□□□□□ -0.32
COL4A1-201ENST00000375820 OR8J3Q8NGG0 315 aa13.03□□□□□ -0.32
COL4A1-201ENST00000375820 FRZBQ92765 325 aa13.03□□□□□ -0.32
COL4A1-201ENST00000375820 SLCO2A1Q92959 643 aa13.03□□□□□ -0.32
COL4A1-201ENST00000375820 LGALS12Q96DT0 336 aa13.03□□□□□ -0.32
COL4A1-201ENST00000375820 NKX2-4Q9H2Z4 354 aa13.03□□□□□ -0.32
COL4A1-201ENST00000375820 KCNIP1Q9NZI2 227 aa13.03□□□□□ -0.32
COL4A1-201ENST00000375820 RHBDD3Q9Y3P4 386 aa13.03□□□□□ -0.32
COL4A1-201ENST00000375820 PIRO00625 290 aa13.03□□□□□ -0.32
COL4A1-201ENST00000375820 UCHL1P09936 223 aa13.03□□□□□ -0.32
COL4A1-201ENST00000375820 SLC35E2BP0CK96 405 aa13.03□□□□□ -0.32
COL4A1-201ENST00000375820 THBS2P35442 1172 aa13.03□□□□□ -0.32
COL4A1-201ENST00000375820 SGSHP51688 502 aa13.03□□□□□ -0.32
COL4A1-201ENST00000375820 BMXP51813 675 aa13.03□□□□□ -0.32
COL4A1-201ENST00000375820 ZNF45Q02386 682 aa13.03□□□□□ -0.32
COL4A1-201ENST00000375820 MARVELD2Q8N4S9 558 aa13.03□□□□□ -0.32
COL4A1-201ENST00000375820 CHST14Q8NCH0 376 aa13.03□□□□□ -0.32
COL4A1-201ENST00000375820 OR56B2PQ8NGI1 322 aa13.03□□□□□ -0.32
COL4A1-201ENST00000375820 NDNFQ8TB73 568 aa13.03□□□□□ -0.32
COL4A1-201ENST00000375820 SLC41A3Q96GZ6 507 aa13.03□□□□□ -0.32
COL4A1-201ENST00000375820 MMP27Q9H306 513 aa13.03□□□□□ -0.32
COL4A1-201ENST00000375820 GCM1Q9NP62 436 aa13.03□□□□□ -0.32
COL4A1-201ENST00000375820 RPL35P42766 123 aaKnown RBP13.03□□□□□ -0.32
COL4A1-201ENST00000375820 CAV2P51636 162 aa13.03□□□□□ -0.32
COL4A1-201ENST00000375820 PLEKHN1Q494U1 663 aaPredicted RBP13.03□□□□□ -0.32
COL4A1-201ENST00000375820 GTDC1Q4AE62 458 aa13.03□□□□□ -0.32
COL4A1-201ENST00000375820 C9orf135Q5VTT2 229 aa13.03□□□□□ -0.32
COL4A1-201ENST00000375820 OR5AK2Q8NH90 309 aa13.03□□□□□ -0.32
COL4A1-201ENST00000375820 NETO1Q8TDF5 533 aa13.03□□□□□ -0.32
COL4A1-201ENST00000375820 ZMYND19Q96E35 227 aaPredicted RBP13.03□□□□□ -0.32
COL4A1-201ENST00000375820 IMP4Q96G21 291 aaKnown RBP13.03□□□□□ -0.32
COL4A1-201ENST00000375820 FAXDC2Q96IV6 333 aa13.03□□□□□ -0.32
COL4A1-201ENST00000375820 B3GNT2Q9NY97 397 aa13.03□□□□□ -0.32
COL4A1-201ENST00000375820 PCDHGA2Q9Y5H1 932 aa13.03□□□□□ -0.32
COL4A1-201ENST00000375820 GXYLT2A0PJZ3 443 aa13.03□□□□□ -0.32
COL4A1-201ENST00000375820 RNH1P13489 461 aaKnown RBP13.03□□□□□ -0.32
COL4A1-201ENST00000375820 JUPP14923 745 aa13.03□□□□□ -0.32
COL4A1-201ENST00000375820 GABRR1P24046 479 aa13.03□□□□□ -0.32
COL4A1-201ENST00000375820 GJA5P36382 358 aa13.03□□□□□ -0.32
COL4A1-201ENST00000375820 RPS15AP62244 130 aaKnown RBP13.03□□□□□ -0.32
COL4A1-201ENST00000375820 PSPHP78330 225 aa13.03□□□□□ -0.32
COL4A1-201ENST00000375820 DEFB133Q30KQ1 61 aa13.03□□□□□ -0.32
COL4A1-201ENST00000375820 UGT3A2Q3SY77 523 aa13.03□□□□□ -0.32
COL4A1-201ENST00000375820 DDX1Q92499 740 aaKnown RBP13.03□□□□□ -0.32
COL4A1-201ENST00000375820 ARL5BQ96KC2 179 aa13.03□□□□□ -0.32
COL4A1-201ENST00000375820 OR4K3Q96R72 315 aa13.03□□□□□ -0.32
COL4A1-201ENST00000375820 FEVQ99581 238 aa13.03□□□□□ -0.32
COL4A1-201ENST00000375820 SERTAD4Q9NUC0 356 aa13.03□□□□□ -0.32
COL4A1-201ENST00000375820 FAM230AA0A1W2PPH8 454 aa13.03□□□□□ -0.32
COL4A1-201ENST00000375820 ARGFXA6NJG6 315 aa13.03□□□□□ -0.32
COL4A1-201ENST00000375820 KLF11O14901 512 aa13.03□□□□□ -0.32
COL4A1-201ENST00000375820 SYT7O43581 403 aa13.03□□□□□ -0.32
COL4A1-201ENST00000375820 LCATP04180 440 aa13.03□□□□□ -0.32
COL4A1-201ENST00000375820 KDELR2P33947 212 aa13.03□□□□□ -0.32
COL4A1-201ENST00000375820 HOXC5Q00444 222 aa13.03□□□□□ -0.32
COL4A1-201ENST00000375820 TMEM205Q6UW68 189 aa13.03□□□□□ -0.32
COL4A1-201ENST00000375820 ZNF572Q7Z3I7 529 aaPredicted RBP13.03□□□□□ -0.32
COL4A1-201ENST00000375820 COMMD7Q86VX2 200 aa13.03□□□□□ -0.32
COL4A1-201ENST00000375820 OR5D16Q8NGK9 328 aa13.03□□□□□ -0.32
COL4A1-201ENST00000375820 OR9A2Q8NGT5 310 aa13.03□□□□□ -0.32
COL4A1-201ENST00000375820 TBCCD1Q9NVR7 557 aa13.03□□□□□ -0.32
COL4A1-201ENST00000375820 PPLO60437 1756 aa13.02□□□□□ -0.32
COL4A1-201ENST00000375820 KRBA1A5PL33 1030 aa13.02□□□□□ -0.32
COL4A1-201ENST00000375820 SGK494L7N484 410 aa13.02□□□□□ -0.32
COL4A1-201ENST00000375820 ZNF888P0CJ79 500 aaPredicted RBP13.02□□□□□ -0.32
COL4A1-201ENST00000375820 CHMP24386 653 aa13.02□□□□□ -0.32
COL4A1-201ENST00000375820 PSMB10P40306 273 aa13.02□□□□□ -0.32
COL4A1-201ENST00000375820 TAS2R38P59533 333 aa13.02□□□□□ -0.32
COL4A1-201ENST00000375820 RPS15P62841 145 aaKnown RBP13.02□□□□□ -0.32
COL4A1-201ENST00000375820 DHCR24Q15392 516 aa13.02□□□□□ -0.32
COL4A1-201ENST00000375820 SLC18B1Q6NT16 456 aa13.02□□□□□ -0.32
COL4A1-201ENST00000375820 DUS1LQ6P1R4 473 aaKnown RBP13.02□□□□□ -0.32
COL4A1-201ENST00000375820 ZNF765Q7L2R6 523 aa13.02□□□□□ -0.32
COL4A1-201ENST00000375820 ASCC1Q8N9N2 400 aaKnown RBP13.02□□□□□ -0.32
COL4A1-201ENST00000375820 C16orf78Q8WTQ4 265 aa13.02□□□□□ -0.32
COL4A1-201ENST00000375820 DDIT4LQ96D03 193 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms