RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 EGLN2Q96KS0 407 aa11.21□□□□□ -0.61
LSM2-208ENST00000375661 ALPK1Q96QP1 1244 aa11.21□□□□□ -0.61
LSM2-208ENST00000375661 C1orf50Q9BV19 199 aa11.21□□□□□ -0.61
LSM2-208ENST00000375661 WDR55Q9H6Y2 383 aaPredicted RBP11.21□□□□□ -0.61
LSM2-208ENST00000375661 DLL4Q9NR61 685 aa11.21□□□□□ -0.61
LSM2-208ENST00000375661 DEPPQ9NTK1 212 aa11.21□□□□□ -0.61
LSM2-208ENST00000375661 HPF1Q9NWY4 346 aa11.21□□□□□ -0.61
LSM2-208ENST00000375661 EXO1Q9UQ84 846 aaKnown RBP11.21□□□□□ -0.61
LSM2-208ENST00000375661 USH1CQ9Y6N9 552 aa11.21□□□□□ -0.61
LSM2-208ENST00000375661 ZNF469Q96JG9 3925 aaPredicted RBP11.21□□□□□ -0.62
LSM2-208ENST00000375661 ABCA2Q9BZC7 2435 aa11.2□□□□□ -0.62
LSM2-208ENST00000375661 GOLGA8QA0A0J9YX86 632 aa11.2□□□□□ -0.62
LSM2-208ENST00000375661 A0A1W2PS29 197 aa11.2□□□□□ -0.62
LSM2-208ENST00000375661 C1orf226A1L170 272 aa11.2□□□□□ -0.62
LSM2-208ENST00000375661 GOLGA8OA6NCC3 632 aa11.2□□□□□ -0.62
LSM2-208ENST00000375661 TRPC5OSA6NMA1 111 aa11.2□□□□□ -0.62
LSM2-208ENST00000375661 GOLGA8NF8WBI6 632 aa11.2□□□□□ -0.62
LSM2-208ENST00000375661 AQP7O14520 342 aa11.2□□□□□ -0.62
LSM2-208ENST00000375661 GLSO94925 669 aaPredicted RBP11.2□□□□□ -0.62
LSM2-208ENST00000375661 GPR75O95800 540 aa11.2□□□□□ -0.62
LSM2-208ENST00000375661 GLI4P10075 376 aa11.2□□□□□ -0.62
LSM2-208ENST00000375661 BCKDHAP12694 445 aa11.2□□□□□ -0.62
LSM2-208ENST00000375661 ALOX15P16050 662 aaPredicted RBP11.2□□□□□ -0.62
LSM2-208ENST00000375661 EPHA3P29320 983 aa11.2□□□□□ -0.62
LSM2-208ENST00000375661 PPP2R1BP30154 601 aa11.2□□□□□ -0.62
LSM2-208ENST00000375661 GYS2P54840 703 aa11.2□□□□□ -0.62
LSM2-208ENST00000375661 DLX5P56178 289 aa11.2□□□□□ -0.62
LSM2-208ENST00000375661 C2orf80Q0P641 193 aa11.2□□□□□ -0.62
LSM2-208ENST00000375661 PRSS53Q2L4Q9 553 aa11.2□□□□□ -0.62
LSM2-208ENST00000375661 HYAL4Q2M3T9 481 aa11.2□□□□□ -0.62
LSM2-208ENST00000375661 SMU1Q2TAY7 513 aa11.2□□□□□ -0.62
LSM2-208ENST00000375661 OR52E8Q6IFG1 317 aa11.2□□□□□ -0.62
LSM2-208ENST00000375661 EPGNQ6UW88 154 aa11.2□□□□□ -0.62
LSM2-208ENST00000375661 TRILQ7L0X0 811 aa11.2□□□□□ -0.62
LSM2-208ENST00000375661 LRRC34Q8IZ02 419 aa11.2□□□□□ -0.62
LSM2-208ENST00000375661 FAM109AQ8N4B1 249 aa11.2□□□□□ -0.62
LSM2-208ENST00000375661 FNDC5Q8NAU1 212 aa11.2□□□□□ -0.62
LSM2-208ENST00000375661 ASB15Q8WXK1 588 aa11.2□□□□□ -0.62
LSM2-208ENST00000375661 NCLNQ969V3 563 aa11.2□□□□□ -0.62
LSM2-208ENST00000375661 MBD6Q96DN6 1003 aa11.2□□□□□ -0.62
LSM2-208ENST00000375661 RMND5BQ96G75 393 aaPredicted RBP11.2□□□□□ -0.62
LSM2-208ENST00000375661 OR52B2Q96RD2 323 aa11.2□□□□□ -0.62
LSM2-208ENST00000375661 FAIM2Q9BWQ8 316 aa11.2□□□□□ -0.62
LSM2-208ENST00000375661 ALOXE3Q9BYJ1 711 aa11.2□□□□□ -0.62
LSM2-208ENST00000375661 TTTY12Q9BZ98 90 aa11.2□□□□□ -0.62
LSM2-208ENST00000375661 WDR41Q9HAD4 459 aa11.2□□□□□ -0.62
LSM2-208ENST00000375661 IL1RL2Q9HB29 575 aa11.2□□□□□ -0.62
LSM2-208ENST00000375661 MYNNQ9NPC7 610 aa11.2□□□□□ -0.62
LSM2-208ENST00000375661 ADAP2Q9NPF8 381 aa11.2□□□□□ -0.62
LSM2-208ENST00000375661 RASSF1Q9NS23 344 aa11.2□□□□□ -0.62
LSM2-208ENST00000375661 ASIC5Q9NY37 505 aa11.2□□□□□ -0.62
LSM2-208ENST00000375661 MYOTQ9UBF9 498 aa11.2□□□□□ -0.62
LSM2-208ENST00000375661 B4GALT7Q9UBV7 327 aa11.2□□□□□ -0.62
LSM2-208ENST00000375661 BAIAP2L1Q9UHR4 511 aa11.2□□□□□ -0.62
LSM2-208ENST00000375661 ZNF223Q9UK11 482 aaPredicted RBP11.2□□□□□ -0.62
LSM2-208ENST00000375661 WBP11Q9Y2W2 641 aaKnown RBP11.2□□□□□ -0.62
LSM2-208ENST00000375661 FAM215AQ9Y5M1 114 aa11.2□□□□□ -0.62
LSM2-208ENST00000375661 ABCA4P78363 2273 aa11.2□□□□□ -0.62
LSM2-208ENST00000375661 A0A0G2JNJ9 132 aa11.19□□□□□ -0.62
LSM2-208ENST00000375661 TMEM200CA6NKL6 621 aa11.19□□□□□ -0.62
LSM2-208ENST00000375661 FAM166BA8MTA8 275 aa11.19□□□□□ -0.62
LSM2-208ENST00000375661 SUSD5O60279 629 aa11.19□□□□□ -0.62
LSM2-208ENST00000375661 GABRA1P14867 456 aa11.19□□□□□ -0.62
LSM2-208ENST00000375661 LBPP18428 481 aa11.19□□□□□ -0.62
LSM2-208ENST00000375661 CNR1P21554 472 aa11.19□□□□□ -0.62
LSM2-208ENST00000375661 KIR2DL3P43628 341 aa11.19□□□□□ -0.62
LSM2-208ENST00000375661 GSTM5P46439 218 aa11.19□□□□□ -0.62
LSM2-208ENST00000375661 DIO3P55073 304 aa11.19□□□□□ -0.62
LSM2-208ENST00000375661 ERVK-8P63133 956 aa11.19□□□□□ -0.62
LSM2-208ENST00000375661 STX4Q12846 297 aa11.19□□□□□ -0.62
LSM2-208ENST00000375661 FOXD4Q12950 439 aaPredicted RBP11.19□□□□□ -0.62
LSM2-208ENST00000375661 HEPACAMQ14CZ8 416 aa11.19□□□□□ -0.62
LSM2-208ENST00000375661 CEBPEQ15744 281 aa11.19□□□□□ -0.62
LSM2-208ENST00000375661 ZNF750Q32MQ0 723 aa11.19□□□□□ -0.62
LSM2-208ENST00000375661 OGFOD2Q6N063 350 aa11.19□□□□□ -0.62
LSM2-208ENST00000375661 SLC48A1Q6P1K1 146 aa11.19□□□□□ -0.62
LSM2-208ENST00000375661 ZNF585AQ6P3V2 769 aa11.19□□□□□ -0.62
LSM2-208ENST00000375661 DGAT2L6Q6ZPD8 337 aa11.19□□□□□ -0.62
LSM2-208ENST00000375661 RTL4Q6ZR62 310 aa11.19□□□□□ -0.62
LSM2-208ENST00000375661 TMEM132CQ8N3T6 1108 aa11.19□□□□□ -0.62
LSM2-208ENST00000375661 LIX1Q8N485 282 aa11.19□□□□□ -0.62
LSM2-208ENST00000375661 GOLM1Q8NBJ4 401 aa11.19□□□□□ -0.62
LSM2-208ENST00000375661 OR5M9Q8NGP3 310 aa11.19□□□□□ -0.62
LSM2-208ENST00000375661 CLHC1Q8NHS4 586 aa11.19□□□□□ -0.62
LSM2-208ENST00000375661 CDC26Q8NHZ8 85 aa11.19□□□□□ -0.62
LSM2-208ENST00000375661 ACTRT2Q8TDY3 377 aa11.19□□□□□ -0.62
LSM2-208ENST00000375661 SARAFQ96BY9 339 aa11.19□□□□□ -0.62
LSM2-208ENST00000375661 SGCZQ96LD1 299 aa11.19□□□□□ -0.62
LSM2-208ENST00000375661 ZNF681Q96N22 645 aa11.19□□□□□ -0.62
LSM2-208ENST00000375661 TSSK3Q96PN8 268 aa11.19□□□□□ -0.62
LSM2-208ENST00000375661 RASL10BQ96S79 203 aa11.19□□□□□ -0.62
LSM2-208ENST00000375661 FAM173AQ9BQD7 235 aa11.19□□□□□ -0.62
LSM2-208ENST00000375661 EBF4Q9BQW3 602 aa11.19□□□□□ -0.62
LSM2-208ENST00000375661 CLEC4MQ9H2X3 399 aaPredicted RBP11.19□□□□□ -0.62
LSM2-208ENST00000375661 PNO1Q9NRX1 252 aaKnown RBP11.19□□□□□ -0.62
LSM2-208ENST00000375661 Q9UFV3 132 aa11.19□□□□□ -0.62
LSM2-208ENST00000375661 RPH3AQ9Y2J0 694 aaPredicted RBP11.19□□□□□ -0.62
LSM2-208ENST00000375661 PCDHGB3Q9Y5G1 929 aa11.19□□□□□ -0.62
LSM2-208ENST00000375661 ANKHD1Q8IWZ3 2542 aaKnown RBP11.19□□□□□ -0.62
LSM2-208ENST00000375661 NIPBLQ6KC79 2804 aaeCLIP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms