RNA–Protein interactions for RNA: ENST00000375425.9

NELFE-201, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-201ENST00000375425 EXOSC8Q96B26 276 aaKnown RBP12.99□□□□□ -0.33
NELFE-201ENST00000375425 KCNA7Q96RP8 456 aa12.99□□□□□ -0.33
NELFE-201ENST00000375425 PRDM14Q9GZV8 571 aa12.99□□□□□ -0.33
NELFE-201ENST00000375425 EPB41L4BQ9H329 900 aa12.99□□□□□ -0.33
NELFE-201ENST00000375425 GALNT9Q9HCQ5 603 aa12.99□□□□□ -0.33
NELFE-201ENST00000375425 FETUBQ9UGM5 382 aa12.99□□□□□ -0.33
NELFE-201ENST00000375425 CAMK2AQ9UQM7 478 aa12.99□□□□□ -0.33
NELFE-201ENST00000375425 STK38LQ9Y2H1 464 aa12.99□□□□□ -0.33
NELFE-201ENST00000375425 GPR55Q9Y2T6 319 aaPredicted RBP12.99□□□□□ -0.33
NELFE-201ENST00000375425 L3MBTL1Q9Y468 752 aa12.99□□□□□ -0.33
NELFE-201ENST00000375425 HIVEP1P15822 2718 aa12.99□□□□□ -0.33
NELFE-201ENST00000375425 SPG11Q96JI7 2443 aa12.98□□□□□ -0.33
NELFE-201ENST00000375425 A0A1W2PPM1 405 aa12.98□□□□□ -0.33
NELFE-201ENST00000375425 FRG2CA6NGY1 282 aa12.98□□□□□ -0.33
NELFE-201ENST00000375425 SNPHO15079 494 aa12.98□□□□□ -0.33
NELFE-201ENST00000375425 TO15178 435 aa12.98□□□□□ -0.33
NELFE-201ENST00000375425 NME6O75414 186 aaPredicted RBP12.98□□□□□ -0.33
NELFE-201ENST00000375425 REM1O75628 298 aa12.98□□□□□ -0.33
NELFE-201ENST00000375425 ZWINTO95229 277 aa12.98□□□□□ -0.33
NELFE-201ENST00000375425 IL2RAP01589 272 aa12.98□□□□□ -0.33
NELFE-201ENST00000375425 ENO1P06733 434 aaKnown RBP12.98□□□□□ -0.33
NELFE-201ENST00000375425 BMP5P22003 454 aa12.98□□□□□ -0.33
NELFE-201ENST00000375425 NAGLUP54802 743 aa12.98□□□□□ -0.33
NELFE-201ENST00000375425 GALNT18Q6P9A2 607 aa12.98□□□□□ -0.33
NELFE-201ENST00000375425 YRDCQ86U90 279 aaKnown RBP12.98□□□□□ -0.33
NELFE-201ENST00000375425 TMEM200AQ86VY9 491 aa12.98□□□□□ -0.33
NELFE-201ENST00000375425 LACC1Q8IV20 430 aa12.98□□□□□ -0.33
NELFE-201ENST00000375425 SAMD14Q8IZD0 417 aaPredicted RBP12.98□□□□□ -0.33
NELFE-201ENST00000375425 CCNYL1Q8N7R7 359 aa12.98□□□□□ -0.33
NELFE-201ENST00000375425 FAM83FQ8NEG4 500 aaPredicted RBP12.98□□□□□ -0.33
NELFE-201ENST00000375425 OR9A2Q8NGT5 310 aa12.98□□□□□ -0.33
NELFE-201ENST00000375425 ZNF675Q8TD23 568 aa12.98□□□□□ -0.33
NELFE-201ENST00000375425 TMBIM1Q969X1 311 aa12.98□□□□□ -0.33
NELFE-201ENST00000375425 C11orf24Q96F05 449 aaPredicted RBP12.98□□□□□ -0.33
NELFE-201ENST00000375425 WDYHV1Q96HA8 205 aa12.98□□□□□ -0.33
NELFE-201ENST00000375425 EBPLQ9BY08 206 aa12.98□□□□□ -0.33
NELFE-201ENST00000375425 UGT2B28Q9BY64 529 aa12.98□□□□□ -0.33
NELFE-201ENST00000375425 GSTO2Q9H4Y5 243 aa12.98□□□□□ -0.33
NELFE-201ENST00000375425 MID1IP1Q9NPA3 183 aa12.98□□□□□ -0.33
NELFE-201ENST00000375425 KLRF1Q9NZS2 232 aa12.98□□□□□ -0.33
NELFE-201ENST00000375425 ZNF629Q9UEG4 869 aaPredicted RBP12.98□□□□□ -0.33
NELFE-201ENST00000375425 EXO1Q9UQ84 846 aaKnown RBP12.98□□□□□ -0.33
NELFE-201ENST00000375425 SERTM1A2A2V5 107 aa12.97□□□□□ -0.33
NELFE-201ENST00000375425 CCDC151A5D8V7 595 aa12.97□□□□□ -0.33
NELFE-201ENST00000375425 OR6C70A6NIJ9 312 aa12.97□□□□□ -0.33
NELFE-201ENST00000375425 G3V2L1 256 aa12.97□□□□□ -0.33
NELFE-201ENST00000375425 UBFD1O14562 309 aaKnown RBP12.97□□□□□ -0.33
NELFE-201ENST00000375425 DVL2O14641 736 aa12.97□□□□□ -0.33
NELFE-201ENST00000375425 CBR3O75828 277 aa12.97□□□□□ -0.33
NELFE-201ENST00000375425 ANXA4P09525 319 aaPredicted RBP12.97□□□□□ -0.33
NELFE-201ENST00000375425 CT45A8P0DMV1 189 aa12.97□□□□□ -0.33
NELFE-201ENST00000375425 CT45A9P0DMV2 189 aa12.97□□□□□ -0.33
NELFE-201ENST00000375425 TIA1P31483 386 aaKnown RBP eCLIP12.97□□□□□ -0.33
NELFE-201ENST00000375425 UQCRC1P31930 480 aa12.97□□□□□ -0.33
NELFE-201ENST00000375425 FOXA1P55317 472 aa12.97□□□□□ -0.33
NELFE-201ENST00000375425 SF3B4Q15427 424 aaKnown RBP eCLIP12.97□□□□□ -0.33
NELFE-201ENST00000375425 CT45A2Q5DJT8 189 aa12.97□□□□□ -0.33
NELFE-201ENST00000375425 SPDYAQ5MJ70 313 aa12.97□□□□□ -0.33
NELFE-201ENST00000375425 DCST1Q5T197 706 aa12.97□□□□□ -0.33
NELFE-201ENST00000375425 NSUN5P2Q63ZY6 315 aa12.97□□□□□ -0.33
NELFE-201ENST00000375425 SH2D5Q6ZV89 423 aa12.97□□□□□ -0.33
NELFE-201ENST00000375425 CNPY4Q8N129 248 aa12.97□□□□□ -0.33
NELFE-201ENST00000375425 WDSUB1Q8N9V3 476 aa12.97□□□□□ -0.33
NELFE-201ENST00000375425 RELL2Q8NC24 303 aaPredicted RBP12.97□□□□□ -0.33
NELFE-201ENST00000375425 TMCO6Q96DC7 493 aa12.97□□□□□ -0.33
NELFE-201ENST00000375425 ERP27Q96DN0 273 aa12.97□□□□□ -0.33
NELFE-201ENST00000375425 COL21A1Q96P44 957 aa12.97□□□□□ -0.33
NELFE-201ENST00000375425 ADOQ96SZ5 270 aa12.97□□□□□ -0.33
NELFE-201ENST00000375425 OSBPL11Q9BXB4 747 aa12.97□□□□□ -0.33
NELFE-201ENST00000375425 SLC35C2Q9NQQ7 365 aa12.97□□□□□ -0.33
NELFE-201ENST00000375425 GIMAP4Q9NUV9 329 aa12.97□□□□□ -0.33
NELFE-201ENST00000375425 EMCNQ9ULC0 261 aa12.97□□□□□ -0.33
NELFE-201ENST00000375425 MAPRE3Q9UPY8 281 aa12.97□□□□□ -0.33
NELFE-201ENST00000375425 FREM3P0C091 2139 aa12.97□□□□□ -0.33
NELFE-201ENST00000375425 F8P00451 2351 aa12.97□□□□□ -0.33
NELFE-201ENST00000375425 PRAMEF25A6NGN4 478 aa12.96□□□□□ -0.33
NELFE-201ENST00000375425 MYL2P10916 166 aa12.96□□□□□ -0.33
NELFE-201ENST00000375425 MPIP34949 423 aa12.96□□□□□ -0.33
NELFE-201ENST00000375425 KIR2DL3P43628 341 aa12.96□□□□□ -0.33
NELFE-201ENST00000375425 CORO7P57737 925 aa12.96□□□□□ -0.33
NELFE-201ENST00000375425 C2orf80Q0P641 193 aa12.96□□□□□ -0.33
NELFE-201ENST00000375425 CEBPEQ15744 281 aa12.96□□□□□ -0.33
NELFE-201ENST00000375425 ERCC6LQ2NKX8 1250 aa12.96□□□□□ -0.33
NELFE-201ENST00000375425 POMZP3Q6PJE2 187 aa12.96□□□□□ -0.33
NELFE-201ENST00000375425 GSPT2Q8IYD1 628 aaKnown RBP12.96□□□□□ -0.33
NELFE-201ENST00000375425 ZZZ3Q8IYH5 903 aa12.96□□□□□ -0.33
NELFE-201ENST00000375425 RDH11Q8TC12 318 aa12.96□□□□□ -0.33
NELFE-201ENST00000375425 NRGNQ92686 78 aa12.96□□□□□ -0.33
NELFE-201ENST00000375425 CCDC126Q96EE4 140 aa12.96□□□□□ -0.33
NELFE-201ENST00000375425 VSTM2LQ96N03 204 aa12.96□□□□□ -0.33
NELFE-201ENST00000375425 BTBD9Q96Q07 612 aa12.96□□□□□ -0.33
NELFE-201ENST00000375425 TRIB1Q96RU8 372 aa12.96□□□□□ -0.33
NELFE-201ENST00000375425 CALHM2Q9HA72 323 aa12.96□□□□□ -0.33
NELFE-201ENST00000375425 SERHLQ9NQF3 203 aa12.96□□□□□ -0.33
NELFE-201ENST00000375425 SIRT5Q9NXA8 310 aa12.96□□□□□ -0.33
NELFE-201ENST00000375425 ANKRD17O75179 2603 aaKnown RBP12.96□□□□□ -0.33
NELFE-201ENST00000375425 CD8B2A6NJW9 211 aa12.96□□□□□ -0.34
NELFE-201ENST00000375425 PLOD3O60568 738 aa12.96□□□□□ -0.34
NELFE-201ENST00000375425 ABCB7O75027 752 aa12.96□□□□□ -0.34
NELFE-201ENST00000375425 ERN1O75460 977 aaKnown RBP12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms