RNA–Protein interactions for RNA: ENST00000373602.9

CCDC28B-201, Transcript of coiled-coil domain containing 28B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC28B, Length 1,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28B-201ENST00000373602 MSX1P28360 303 aa19.84■□□□□ 0.77
CCDC28B-201ENST00000373602 ADH7P40394 386 aa19.84■□□□□ 0.77
CCDC28B-201ENST00000373602 PTGDSP41222 190 aa19.84■□□□□ 0.77
CCDC28B-201ENST00000373602 CRYZQ08257 329 aaKnown RBP19.84■□□□□ 0.77
CCDC28B-201ENST00000373602 IMPG1Q17R60 797 aa19.84■□□□□ 0.77
CCDC28B-201ENST00000373602 SLC30A6Q6NXT4 461 aa19.84■□□□□ 0.77
CCDC28B-201ENST00000373602 ULK2Q8IYT8 1036 aa19.84■□□□□ 0.77
CCDC28B-201ENST00000373602 C4orf33Q8N1A6 199 aa19.84■□□□□ 0.77
CCDC28B-201ENST00000373602 CCDC63Q8NA47 563 aa19.84■□□□□ 0.77
CCDC28B-201ENST00000373602 FAM76AQ8TAV0 307 aa19.84■□□□□ 0.77
CCDC28B-201ENST00000373602 PUM2Q8TB72 1066 aaKnown RBP eCLIP19.84■□□□□ 0.77
CCDC28B-201ENST00000373602 BTBD9Q96Q07 612 aa19.84■□□□□ 0.77
CCDC28B-201ENST00000373602 ANKZF1Q9H8Y5 726 aa19.84■□□□□ 0.77
CCDC28B-201ENST00000373602 TNFRSF12AQ9NP84 129 aa19.84■□□□□ 0.77
CCDC28B-201ENST00000373602 FREM3P0C091 2139 aa19.84■□□□□ 0.77
CCDC28B-201ENST00000373602 HCFC1P51610 2035 aa19.83■□□□□ 0.77
CCDC28B-201ENST00000373602 FAM47E-STBD1D6RA91 191 aa19.83■□□□□ 0.77
CCDC28B-201ENST00000373602 GNB5O14775 395 aa19.83■□□□□ 0.77
CCDC28B-201ENST00000373602 PLOD3O60568 738 aa19.83■□□□□ 0.77
CCDC28B-201ENST00000373602 RSL1D1O76021 490 aaKnown RBP19.83■□□□□ 0.77
CCDC28B-201ENST00000373602 CT45A8P0DMV1 189 aa19.83■□□□□ 0.77
CCDC28B-201ENST00000373602 CT45A9P0DMV2 189 aa19.83■□□□□ 0.77
CCDC28B-201ENST00000373602 UROSP10746 265 aa19.83■□□□□ 0.77
CCDC28B-201ENST00000373602 PTPN6P29350 595 aa19.83■□□□□ 0.77
CCDC28B-201ENST00000373602 MPIP34949 423 aa19.83■□□□□ 0.77
CCDC28B-201ENST00000373602 C2orf80Q0P641 193 aa19.83■□□□□ 0.77
CCDC28B-201ENST00000373602 SNTA1Q13424 505 aa19.83■□□□□ 0.77
CCDC28B-201ENST00000373602 CT45A2Q5DJT8 189 aa19.83■□□□□ 0.77
CCDC28B-201ENST00000373602 RIPPLY2Q5TAB7 128 aa19.83■□□□□ 0.77
CCDC28B-201ENST00000373602 LIPMQ5VYY2 423 aa19.83■□□□□ 0.77
CCDC28B-201ENST00000373602 FAM71E1Q6IPT2 247 aa19.83■□□□□ 0.77
CCDC28B-201ENST00000373602 ANGPTL8Q6UXH0 198 aa19.83■□□□□ 0.77
CCDC28B-201ENST00000373602 FAM9CQ8IZT9 166 aa19.83■□□□□ 0.77
CCDC28B-201ENST00000373602 OR1J4Q8NGS1 313 aa19.83■□□□□ 0.77
CCDC28B-201ENST00000373602 VSTM2LQ96N03 204 aa19.83■□□□□ 0.77
CCDC28B-201ENST00000373602 TIMP4Q99727 224 aa19.83■□□□□ 0.77
CCDC28B-201ENST00000373602 OSBPL11Q9BXB4 747 aa19.83■□□□□ 0.77
CCDC28B-201ENST00000373602 RRAGDQ9NQL2 400 aaPredicted RBP19.83■□□□□ 0.77
CCDC28B-201ENST00000373602 MID2Q9UJV3 735 aa19.83■□□□□ 0.77
CCDC28B-201ENST00000373602 WBP11Q9Y2W2 641 aaKnown RBP19.83■□□□□ 0.77
CCDC28B-201ENST00000373602 FBN2P35556 2912 aa19.82■□□□□ 0.76
CCDC28B-201ENST00000373602 OR6C70A6NIJ9 312 aa19.82■□□□□ 0.76
CCDC28B-201ENST00000373602 AHRRA9YTQ3 701 aa19.82■□□□□ 0.76
CCDC28B-201ENST00000373602 MYO1GB0I1T2 1018 aa19.82■□□□□ 0.76
CCDC28B-201ENST00000373602 SNPHO15079 494 aa19.82■□□□□ 0.76
CCDC28B-201ENST00000373602 ICOSLGO75144 302 aa19.82■□□□□ 0.76
CCDC28B-201ENST00000373602 PRSS53Q2L4Q9 553 aa19.82■□□□□ 0.76
CCDC28B-201ENST00000373602 ERCC6LQ2NKX8 1250 aa19.82■□□□□ 0.76
CCDC28B-201ENST00000373602 NHSL2Q5HYW2 709 aa19.82■□□□□ 0.76
CCDC28B-201ENST00000373602 VASNQ6EMK4 673 aa19.82■□□□□ 0.76
CCDC28B-201ENST00000373602 OR7G2Q8NG99 324 aa19.82■□□□□ 0.76
CCDC28B-201ENST00000373602 CDC26Q8NHZ8 85 aa19.82■□□□□ 0.76
CCDC28B-201ENST00000373602 TMBIM1Q969X1 311 aa19.82■□□□□ 0.76
CCDC28B-201ENST00000373602 SLC35A4Q96G79 324 aa19.82■□□□□ 0.76
CCDC28B-201ENST00000373602 METTL2AQ96IZ6 378 aaKnown RBP19.82■□□□□ 0.76
CCDC28B-201ENST00000373602 BBS4Q96RK4 519 aa19.82■□□□□ 0.76
CCDC28B-201ENST00000373602 STMN4Q9H169 189 aaPredicted RBP19.82■□□□□ 0.76
CCDC28B-201ENST00000373602 MYNNQ9NPC7 610 aa19.82■□□□□ 0.76
CCDC28B-201ENST00000373602 TAS2R7Q9NYW3 318 aa19.82■□□□□ 0.76
CCDC28B-201ENST00000373602 CCL27Q9Y4X3 112 aa19.82■□□□□ 0.76
CCDC28B-201ENST00000373602 POLR3HQ9Y535 204 aaPredicted RBP19.82■□□□□ 0.76
CCDC28B-201ENST00000373602 LRBAP50851 2863 aa19.81■□□□□ 0.76
CCDC28B-201ENST00000373602 PRAMEF25A6NGN4 478 aa19.81■□□□□ 0.76
CCDC28B-201ENST00000373602 NME6O75414 186 aaPredicted RBP19.81■□□□□ 0.76
CCDC28B-201ENST00000373602 ERN1O75460 977 aaKnown RBP19.81■□□□□ 0.76
CCDC28B-201ENST00000373602 REM1O75628 298 aa19.81■□□□□ 0.76
CCDC28B-201ENST00000373602 CORO7P57737 925 aa19.81■□□□□ 0.76
CCDC28B-201ENST00000373602 PSPHP78330 225 aa19.81■□□□□ 0.76
CCDC28B-201ENST00000373602 EIPR1Q53HC9 387 aa19.81■□□□□ 0.76
CCDC28B-201ENST00000373602 NPSR1Q6W5P4 371 aa19.81■□□□□ 0.76
CCDC28B-201ENST00000373602 SEM1Q6ZVN7 128 aa19.81■□□□□ 0.76
CCDC28B-201ENST00000373602 LIX1LQ8IVB5 337 aa19.81■□□□□ 0.76
CCDC28B-201ENST00000373602 C10orf107Q8IVU9 208 aa19.81■□□□□ 0.76
CCDC28B-201ENST00000373602 TMCO6Q96DC7 493 aa19.81■□□□□ 0.76
CCDC28B-201ENST00000373602 COL21A1Q96P44 957 aa19.81■□□□□ 0.76
CCDC28B-201ENST00000373602 PRDM14Q9GZV8 571 aa19.81■□□□□ 0.76
CCDC28B-201ENST00000373602 FOLH1BQ9HBA9 442 aa19.81■□□□□ 0.76
CCDC28B-201ENST00000373602 GALNT9Q9HCQ5 603 aa19.81■□□□□ 0.76
CCDC28B-201ENST00000373602 MKS1Q9NXB0 559 aa19.81■□□□□ 0.76
CCDC28B-201ENST00000373602 KLRF1Q9NZS2 232 aa19.81■□□□□ 0.76
CCDC28B-201ENST00000373602 SLC6A5Q9Y345 797 aa19.81■□□□□ 0.76
CCDC28B-201ENST00000373602 INTS1Q8N201 2190 aaKnown RBP19.8■□□□□ 0.76
CCDC28B-201ENST00000373602 TLDC2A0PJX2 215 aa19.8■□□□□ 0.76
CCDC28B-201ENST00000373602 NPIPB8E9PQR5 432 aa19.8■□□□□ 0.76
CCDC28B-201ENST00000373602 ABCB7O75027 752 aa19.8■□□□□ 0.76
CCDC28B-201ENST00000373602 EPPINO95925 133 aa19.8■□□□□ 0.76
CCDC28B-201ENST00000373602 PRPH2P23942 346 aa19.8■□□□□ 0.76
CCDC28B-201ENST00000373602 TLE4Q04727 773 aa19.8■□□□□ 0.76
CCDC28B-201ENST00000373602 PCLAFQ15004 111 aa19.8■□□□□ 0.76
CCDC28B-201ENST00000373602 KIAA0040Q15053 153 aa19.8■□□□□ 0.76
CCDC28B-201ENST00000373602 TOMM20Q15388 145 aa19.8■□□□□ 0.76
CCDC28B-201ENST00000373602 SLC25A35Q3KQZ1 300 aa19.8■□□□□ 0.76
CCDC28B-201ENST00000373602 ACSF3Q4G176 576 aaPredicted RBP19.8■□□□□ 0.76
CCDC28B-201ENST00000373602 WIPI1Q5MNZ9 446 aaPredicted RBP19.8■□□□□ 0.76
CCDC28B-201ENST00000373602 CLEC6AQ6EIG7 209 aa19.8■□□□□ 0.76
CCDC28B-201ENST00000373602 NOXRED1Q6NXP6 359 aa19.8■□□□□ 0.76
CCDC28B-201ENST00000373602 IKBIPQ70UQ0 350 aa19.8■□□□□ 0.76
CCDC28B-201ENST00000373602 DMRTC2Q8IXT2 367 aaPredicted RBP19.8■□□□□ 0.76
CCDC28B-201ENST00000373602 PM20D2Q8IYS1 436 aa19.8■□□□□ 0.76
CCDC28B-201ENST00000373602 OR2W6PQ8NHA6 318 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms