RNA–Protein interactions for RNA: ENST00000372748.7

COL9A2-202, Transcript of collagen type IX alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A2, Length 2,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-202ENST00000372748 GSAPA4D1B5 854 aa13.95□□□□□ -0.18
COL9A2-202ENST00000372748 I3L521 148 aa13.95□□□□□ -0.18
COL9A2-202ENST00000372748 GABRPO00591 440 aa13.95□□□□□ -0.18
COL9A2-202ENST00000372748 CHP2O43745 196 aa13.95□□□□□ -0.18
COL9A2-202ENST00000372748 CTSLP07711 333 aa13.95□□□□□ -0.18
COL9A2-202ENST00000372748 SYPP08247 313 aa13.95□□□□□ -0.18
COL9A2-202ENST00000372748 C1GALT1C1LP0DN25 315 aa13.95□□□□□ -0.18
COL9A2-202ENST00000372748 TYRP14679 529 aa13.95□□□□□ -0.18
COL9A2-202ENST00000372748 ZNF250P15622 560 aa13.95□□□□□ -0.18
COL9A2-202ENST00000372748 XPAP23025 273 aaPredicted RBP13.95□□□□□ -0.18
COL9A2-202ENST00000372748 FGF9P31371 208 aaPredicted RBP13.95□□□□□ -0.18
COL9A2-202ENST00000372748 AP2S1P53680 142 aaPredicted RBP13.95□□□□□ -0.18
COL9A2-202ENST00000372748 PXDC1Q5TGL8 231 aa13.95□□□□□ -0.18
COL9A2-202ENST00000372748 ADIPOR2Q86V24 386 aa13.95□□□□□ -0.18
COL9A2-202ENST00000372748 OR6C4Q8NGE1 309 aa13.95□□□□□ -0.18
COL9A2-202ENST00000372748 LRRC20Q8TCA0 184 aa13.95□□□□□ -0.18
COL9A2-202ENST00000372748 FOPNLQ96NB1 174 aa13.95□□□□□ -0.18
COL9A2-202ENST00000372748 NCKAP1Q9Y2A7 1128 aa13.95□□□□□ -0.18
COL9A2-202ENST00000372748 COL4A6Q14031 1691 aa13.95□□□□□ -0.18
COL9A2-202ENST00000372748 C5orf42Q9H799 3197 aa13.95□□□□□ -0.18
COL9A2-202ENST00000372748 PRAMEF27A3QJZ7 478 aa13.95□□□□□ -0.18
COL9A2-202ENST00000372748 SHOXO15266 292 aa13.95□□□□□ -0.18
COL9A2-202ENST00000372748 PRODHO43272 600 aa13.95□□□□□ -0.18
COL9A2-202ENST00000372748 HRO43593 1189 aa13.95□□□□□ -0.18
COL9A2-202ENST00000372748 RFPL3O75679 317 aa13.95□□□□□ -0.18
COL9A2-202ENST00000372748 SLC22A5O76082 557 aa13.95□□□□□ -0.18
COL9A2-202ENST00000372748 TIMP2P16035 220 aa13.95□□□□□ -0.18
COL9A2-202ENST00000372748 RPL3P39023 403 aaKnown RBP13.95□□□□□ -0.18
COL9A2-202ENST00000372748 PER3P56645 1201 aa13.95□□□□□ -0.18
COL9A2-202ENST00000372748 POU6F2P78424 691 aaPredicted RBP13.95□□□□□ -0.18
COL9A2-202ENST00000372748 RAB40BQ12829 278 aa13.95□□□□□ -0.18
COL9A2-202ENST00000372748 TMEM115Q12893 351 aaPredicted RBP13.95□□□□□ -0.18
COL9A2-202ENST00000372748 GRIN2CQ14957 1233 aa13.95□□□□□ -0.18
COL9A2-202ENST00000372748 POU4F3Q15319 338 aa13.95□□□□□ -0.18
COL9A2-202ENST00000372748 IDNKQ5T6J7 187 aa13.95□□□□□ -0.18
COL9A2-202ENST00000372748 KIAA1161Q6NSJ0 714 aa13.95□□□□□ -0.18
COL9A2-202ENST00000372748 IDO2Q6ZQW0 420 aa13.95□□□□□ -0.18
COL9A2-202ENST00000372748 SLAIN1Q8ND83 568 aa13.95□□□□□ -0.18
COL9A2-202ENST00000372748 ANKK1Q8NFD2 765 aa13.95□□□□□ -0.18
COL9A2-202ENST00000372748 EXOSC8Q96B26 276 aaKnown RBP13.95□□□□□ -0.18
COL9A2-202ENST00000372748 NEURL3Q96EH8 262 aa13.95□□□□□ -0.18
COL9A2-202ENST00000372748 ART5Q96L15 291 aa13.95□□□□□ -0.18
COL9A2-202ENST00000372748 NRTNQ99748 197 aa13.95□□□□□ -0.18
COL9A2-202ENST00000372748 ARPC5LQ9BPX5 153 aa13.95□□□□□ -0.18
COL9A2-202ENST00000372748 FUZQ9BT04 418 aa13.95□□□□□ -0.18
COL9A2-202ENST00000372748 MED28Q9H204 178 aa13.95□□□□□ -0.18
COL9A2-202ENST00000372748 DIABLOQ9NR28 239 aa13.95□□□□□ -0.18
COL9A2-202ENST00000372748 EVA1BQ9NVM1 165 aa13.95□□□□□ -0.18
COL9A2-202ENST00000372748 TRDV1A0A1B0GX56 115 aa13.94□□□□□ -0.18
COL9A2-202ENST00000372748 FOXE1O00358 373 aaPredicted RBP13.94□□□□□ -0.18
COL9A2-202ENST00000372748 PDGFAP04085 211 aa13.94□□□□□ -0.18
COL9A2-202ENST00000372748 CTSAP10619 480 aa13.94□□□□□ -0.18
COL9A2-202ENST00000372748 TFPIP10646 304 aa13.94□□□□□ -0.18
COL9A2-202ENST00000372748 M6PRP20645 277 aa13.94□□□□□ -0.18
COL9A2-202ENST00000372748 SMSP52788 366 aa13.94□□□□□ -0.18
COL9A2-202ENST00000372748 CDK5Q00535 292 aa13.94□□□□□ -0.18
COL9A2-202ENST00000372748 LY6G5CQ5SRR4 150 aa13.94□□□□□ -0.18
COL9A2-202ENST00000372748 HENMT1Q5T8I9 393 aaKnown RBP13.94□□□□□ -0.18
COL9A2-202ENST00000372748 HIST2H2AA3Q6FI13 130 aa13.94□□□□□ -0.18
COL9A2-202ENST00000372748 TEX261Q6UWH6 196 aa13.94□□□□□ -0.18
COL9A2-202ENST00000372748 TRILQ7L0X0 811 aa13.94□□□□□ -0.18
COL9A2-202ENST00000372748 KRT74Q7RTS7 529 aa13.94□□□□□ -0.18
COL9A2-202ENST00000372748 ZNF680Q8NEM1 530 aa13.94□□□□□ -0.18
COL9A2-202ENST00000372748 OR11H4Q8NGC9 324 aa13.94□□□□□ -0.18
COL9A2-202ENST00000372748 OR6T1Q8NGN1 323 aa13.94□□□□□ -0.18
COL9A2-202ENST00000372748 DNAJA4Q8WW22 397 aaPredicted RBP13.94□□□□□ -0.18
COL9A2-202ENST00000372748 FGF11Q92914 225 aa13.94□□□□□ -0.18
COL9A2-202ENST00000372748 UCN3Q969E3 161 aa13.94□□□□□ -0.18
COL9A2-202ENST00000372748 ZNF689Q96CS4 500 aaPredicted RBP13.94□□□□□ -0.18
COL9A2-202ENST00000372748 SAP130Q9H0E3 1048 aa13.94□□□□□ -0.18
COL9A2-202ENST00000372748 A4GALTQ9NPC4 353 aa13.94□□□□□ -0.18
COL9A2-202ENST00000372748 MAN2C1Q9NTJ4 1040 aa13.94□□□□□ -0.18
COL9A2-202ENST00000372748 CNIH4Q9P003 139 aa13.94□□□□□ -0.18
COL9A2-202ENST00000372748 IL20RAQ9UHF4 553 aa13.94□□□□□ -0.18
COL9A2-202ENST00000372748 U3KQ87 197 aa13.94□□□□□ -0.18
COL9A2-202ENST00000372748 DENND4CQ5VZ89 1909 aa13.94□□□□□ -0.18
COL9A2-202ENST00000372748 ATG13O75143 517 aa13.94□□□□□ -0.18
COL9A2-202ENST00000372748 SLC1A3P43003 542 aa13.94□□□□□ -0.18
COL9A2-202ENST00000372748 SRP9P49458 86 aaKnown RBP13.94□□□□□ -0.18
COL9A2-202ENST00000372748 ADAM15Q13444 863 aa13.94□□□□□ -0.18
COL9A2-202ENST00000372748 RAET1GQ6H3X3 334 aa13.94□□□□□ -0.18
COL9A2-202ENST00000372748 CD200R1LQ6Q8B3 271 aa13.94□□□□□ -0.18
COL9A2-202ENST00000372748 NR2C2APQ86WQ0 139 aa13.94□□□□□ -0.18
COL9A2-202ENST00000372748 ADGRF3Q8IZF5 1079 aa13.94□□□□□ -0.18
COL9A2-202ENST00000372748 BMPERQ8N8U9 685 aa13.94□□□□□ -0.18
COL9A2-202ENST00000372748 PLA2G15Q8NCC3 412 aa13.94□□□□□ -0.18
COL9A2-202ENST00000372748 OR8D4Q8NGM9 314 aa13.94□□□□□ -0.18
COL9A2-202ENST00000372748 CREB3L1Q96BA8 519 aa13.94□□□□□ -0.18
COL9A2-202ENST00000372748 OTULINQ96BN8 352 aa13.94□□□□□ -0.18
COL9A2-202ENST00000372748 IL17FQ96PD4 163 aa13.94□□□□□ -0.18
COL9A2-202ENST00000372748 EFCAB11Q9BUY7 163 aa13.94□□□□□ -0.18
COL9A2-202ENST00000372748 ABCG5Q9H222 651 aa13.94□□□□□ -0.18
COL9A2-202ENST00000372748 SERHL2Q9H4I8 314 aa13.94□□□□□ -0.18
COL9A2-202ENST00000372748 NUDT15Q9NV35 164 aa13.94□□□□□ -0.18
COL9A2-202ENST00000372748 PLXND1Q9Y4D7 1925 aa13.94□□□□□ -0.18
COL9A2-202ENST00000372748 SLC5A10A0PJK1 596 aa13.93□□□□□ -0.18
COL9A2-202ENST00000372748 SGK494L7N484 410 aa13.93□□□□□ -0.18
COL9A2-202ENST00000372748 QSOX1O00391 747 aa13.93□□□□□ -0.18
COL9A2-202ENST00000372748 CDK2AP1O14519 115 aa13.93□□□□□ -0.18
COL9A2-202ENST00000372748 C1orf105O95561 183 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms