RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 RABIFP47224 123 aa13.22□□□□□ -0.29
LDB3-204ENST00000372066 SRP54P61011 504 aaKnown RBP13.22□□□□□ -0.29
LDB3-204ENST00000372066 ABI3BPQ7Z7G0 1075 aa13.22□□□□□ -0.29
LDB3-204ENST00000372066 ASPGQ86U10 573 aa13.22□□□□□ -0.29
LDB3-204ENST00000372066 NRROSQ86YC3 692 aa13.22□□□□□ -0.29
LDB3-204ENST00000372066 ENTHD1Q8IYW4 607 aa13.22□□□□□ -0.29
LDB3-204ENST00000372066 AMER3Q8N944 861 aa13.22□□□□□ -0.29
LDB3-204ENST00000372066 SMYD1Q8NB12 490 aa13.22□□□□□ -0.29
LDB3-204ENST00000372066 ZNF540Q8NDQ6 660 aa13.22□□□□□ -0.29
LDB3-204ENST00000372066 OR8K5Q8NH50 307 aa13.22□□□□□ -0.29
LDB3-204ENST00000372066 FAM174AQ8TBP5 190 aa13.22□□□□□ -0.29
LDB3-204ENST00000372066 CCDC90BQ9GZT6 254 aa13.22□□□□□ -0.29
LDB3-204ENST00000372066 OR51I1Q9H343 314 aa13.22□□□□□ -0.29
LDB3-204ENST00000372066 KLHL31Q9H511 634 aa13.22□□□□□ -0.29
LDB3-204ENST00000372066 C3orf14Q9HBI5 128 aa13.22□□□□□ -0.29
LDB3-204ENST00000372066 POT1Q9NUX5 634 aa13.22□□□□□ -0.29
LDB3-204ENST00000372066 NLGN3Q9NZ94 848 aa13.22□□□□□ -0.29
LDB3-204ENST00000372066 CALML5Q9NZT1 146 aa13.22□□□□□ -0.29
LDB3-204ENST00000372066 ZNF624Q9P2J8 865 aaPredicted RBP13.22□□□□□ -0.29
LDB3-204ENST00000372066 SEC14L3Q9UDX4 400 aa13.22□□□□□ -0.29
LDB3-204ENST00000372066 ENPP5Q9UJA9 477 aa13.22□□□□□ -0.29
LDB3-204ENST00000372066 ACAD8Q9UKU7 415 aa13.22□□□□□ -0.29
LDB3-204ENST00000372066 TMCC3Q9ULS5 477 aa13.22□□□□□ -0.29
LDB3-204ENST00000372066 KLK4Q9Y5K2 254 aa13.22□□□□□ -0.29
LDB3-204ENST00000372066 ENTPD2Q9Y5L3 495 aa13.22□□□□□ -0.29
LDB3-204ENST00000372066 A0A0G2JN53 185 aa13.21□□□□□ -0.29
LDB3-204ENST00000372066 A0A1W2PR48 441 aa13.21□□□□□ -0.29
LDB3-204ENST00000372066 OR5K4A6NMS3 321 aa13.21□□□□□ -0.29
LDB3-204ENST00000372066 FAAHO00519 579 aa13.21□□□□□ -0.29
LDB3-204ENST00000372066 SCAMP1O15126 338 aa13.21□□□□□ -0.29
LDB3-204ENST00000372066 CASC3O15234 703 aaKnown RBP13.21□□□□□ -0.29
LDB3-204ENST00000372066 EMC8O43402 210 aa13.21□□□□□ -0.29
LDB3-204ENST00000372066 XPNPEP2O43895 674 aa13.21□□□□□ -0.29
LDB3-204ENST00000372066 B4GALT2O60909 372 aa13.21□□□□□ -0.29
LDB3-204ENST00000372066 ZIC2O95409 532 aaPredicted RBP13.21□□□□□ -0.29
LDB3-204ENST00000372066 AIFM1O95831 613 aa13.21□□□□□ -0.29
LDB3-204ENST00000372066 RECKO95980 971 aa13.21□□□□□ -0.29
LDB3-204ENST00000372066 GIMD1P0DJR0 217 aa13.21□□□□□ -0.29
LDB3-204ENST00000372066 MPIP34949 423 aa13.21□□□□□ -0.29
LDB3-204ENST00000372066 KRT20P35900 424 aa13.21□□□□□ -0.29
LDB3-204ENST00000372066 DUSP3P51452 185 aaPredicted RBP13.21□□□□□ -0.29
LDB3-204ENST00000372066 HNRNPKP61978 463 aaKnown RBP eCLIP13.21□□□□□ -0.29
LDB3-204ENST00000372066 RPS26P62854 115 aaKnown RBP13.21□□□□□ -0.29
LDB3-204ENST00000372066 CXADRP78310 365 aa13.21□□□□□ -0.29
LDB3-204ENST00000372066 TLE3Q04726 772 aa13.21□□□□□ -0.29
LDB3-204ENST00000372066 EMX1Q04741 257 aaPredicted RBP13.21□□□□□ -0.29
LDB3-204ENST00000372066 ILF3Q12906 894 aaKnown RBP eCLIP13.21□□□□□ -0.29
LDB3-204ENST00000372066 NFATC3Q12968 1075 aa13.21□□□□□ -0.29
LDB3-204ENST00000372066 NPTX1Q15818 432 aa13.21□□□□□ -0.29
LDB3-204ENST00000372066 DUSP7Q16829 419 aa13.21□□□□□ -0.29
LDB3-204ENST00000372066 SYT6Q5T7P8 510 aaPredicted RBP13.21□□□□□ -0.29
LDB3-204ENST00000372066 CROCCP3Q8IVE0 287 aa13.21□□□□□ -0.29
LDB3-204ENST00000372066 SPACA3Q8IXA5 215 aa13.21□□□□□ -0.29
LDB3-204ENST00000372066 SLC22A18ASQ8N1D0 253 aa13.21□□□□□ -0.29
LDB3-204ENST00000372066 OR4E2Q8NGC2 313 aa13.21□□□□□ -0.29
LDB3-204ENST00000372066 SUN3Q8TAQ9 357 aa13.21□□□□□ -0.29
LDB3-204ENST00000372066 FAR1Q8WVX9 515 aa13.21□□□□□ -0.29
LDB3-204ENST00000372066 MYDGFQ969H8 173 aa13.21□□□□□ -0.29
LDB3-204ENST00000372066 DEPDC7Q96QD5 511 aa13.21□□□□□ -0.29
LDB3-204ENST00000372066 ALPK1Q96QP1 1244 aa13.21□□□□□ -0.29
LDB3-204ENST00000372066 SIGLEC11Q96RL6 698 aa13.21□□□□□ -0.29
LDB3-204ENST00000372066 DUSP23Q9BVJ7 150 aa13.21□□□□□ -0.29
LDB3-204ENST00000372066 SERHL2Q9H4I8 314 aa13.21□□□□□ -0.29
LDB3-204ENST00000372066 LIN28AQ9H9Z2 209 aaKnown RBP13.21□□□□□ -0.29
LDB3-204ENST00000372066 EVA1BQ9NVM1 165 aa13.21□□□□□ -0.29
LDB3-204ENST00000372066 C5AR2Q9P296 337 aa13.21□□□□□ -0.29
LDB3-204ENST00000372066 WARS2Q9UGM6 360 aaKnown RBP13.21□□□□□ -0.29
LDB3-204ENST00000372066 APOBEC3BQ9UH17 382 aaKnown RBP13.21□□□□□ -0.29
LDB3-204ENST00000372066 CES1P1Q9UKY3 287 aa13.21□□□□□ -0.29
LDB3-204ENST00000372066 MGAT4BQ9UQ53 548 aa13.21□□□□□ -0.29
LDB3-204ENST00000372066 PCDHGA10Q9Y5H3 936 aa13.21□□□□□ -0.29
LDB3-204ENST00000372066 A0A0G2JPF8 293 aa13.2□□□□□ -0.3
LDB3-204ENST00000372066 HNRNPCL2B2RXH8 293 aa13.2□□□□□ -0.3
LDB3-204ENST00000372066 HNRNPCL3B7ZW38 293 aa13.2□□□□□ -0.3
LDB3-204ENST00000372066 C4orf51C9J302 202 aa13.2□□□□□ -0.3
LDB3-204ENST00000372066 PROM1O43490 865 aa13.2□□□□□ -0.3
LDB3-204ENST00000372066 WBP4O75554 376 aaKnown RBP13.2□□□□□ -0.3
LDB3-204ENST00000372066 RASGRP1O95267 797 aa13.2□□□□□ -0.3
LDB3-204ENST00000372066 TNFP01375 233 aa13.2□□□□□ -0.3
LDB3-204ENST00000372066 HNRNPCL4P0DMR1 293 aa13.2□□□□□ -0.3
LDB3-204ENST00000372066 NR2F6P10588 404 aa13.2□□□□□ -0.3
LDB3-204ENST00000372066 NR2F1P10589 423 aa13.2□□□□□ -0.3
LDB3-204ENST00000372066 AK4P27144 223 aaPredicted RBP13.2□□□□□ -0.3
LDB3-204ENST00000372066 CERS1P27544 350 aa13.2□□□□□ -0.3
LDB3-204ENST00000372066 BUD31P41223 144 aaPredicted RBP13.2□□□□□ -0.3
LDB3-204ENST00000372066 SLC19A1P41440 591 aa13.2□□□□□ -0.3
LDB3-204ENST00000372066 MAPK11Q15759 364 aa13.2□□□□□ -0.3
LDB3-204ENST00000372066 ALG11Q2TAA5 492 aa13.2□□□□□ -0.3
LDB3-204ENST00000372066 RPS26P11Q5JNZ5 115 aaPredicted RBP13.2□□□□□ -0.3
LDB3-204ENST00000372066 CDCP2Q5VXM1 449 aa13.2□□□□□ -0.3
LDB3-204ENST00000372066 LINC00299Q6ZSB3 139 aa13.2□□□□□ -0.3
LDB3-204ENST00000372066 CCDC71Q8IV32 467 aaPredicted RBP13.2□□□□□ -0.3
LDB3-204ENST00000372066 TRIM48Q8IWZ4 208 aa13.2□□□□□ -0.3
LDB3-204ENST00000372066 LSM14AQ8ND56 463 aaKnown RBP13.2□□□□□ -0.3
LDB3-204ENST00000372066 ZNF248Q8NDW4 579 aa13.2□□□□□ -0.3
LDB3-204ENST00000372066 GPR32P1Q8NGA4 272 aa13.2□□□□□ -0.3
LDB3-204ENST00000372066 FAM81AQ8TBF8 368 aa13.2□□□□□ -0.3
LDB3-204ENST00000372066 RSC1A1Q92681 617 aa13.2□□□□□ -0.3
LDB3-204ENST00000372066 FKBP10Q96AY3 582 aa13.2□□□□□ -0.3
LDB3-204ENST00000372066 TM4SF19Q96DZ7 209 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms