RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 ACRV1P26436 265 aa6.46□□□□□ -1.37
CSDE1-204ENST00000369530 SLC1A2P43004 574 aa6.46□□□□□ -1.37
CSDE1-204ENST00000369530 TAS2R39P59534 338 aa6.46□□□□□ -1.37
CSDE1-204ENST00000369530 FAM214AQ32MH5 1076 aa6.46□□□□□ -1.37
CSDE1-204ENST00000369530 GLYR1Q49A26 553 aaPredicted RBP6.46□□□□□ -1.37
CSDE1-204ENST00000369530 ATP13A5Q4VNC0 1218 aa6.46□□□□□ -1.37
CSDE1-204ENST00000369530 PLBD1Q6P4A8 553 aa6.46□□□□□ -1.37
CSDE1-204ENST00000369530 STK32CQ86UX6 486 aa6.46□□□□□ -1.37
CSDE1-204ENST00000369530 KLHL36Q8N4N3 616 aa6.46□□□□□ -1.37
CSDE1-204ENST00000369530 CDYL2Q8N8U2 506 aa6.46□□□□□ -1.37
CSDE1-204ENST00000369530 SRFBP1Q8NEF9 429 aaKnown RBP6.46□□□□□ -1.37
CSDE1-204ENST00000369530 OR2L2Q8NH16 312 aa6.46□□□□□ -1.37
CSDE1-204ENST00000369530 TSPEARQ8WU66 669 aa6.46□□□□□ -1.37
CSDE1-204ENST00000369530 PHF21AQ96BD5 680 aa6.46□□□□□ -1.37
CSDE1-204ENST00000369530 SLC30A3Q99726 388 aa6.46□□□□□ -1.37
CSDE1-204ENST00000369530 SLC25A23Q9BV35 468 aa6.46□□□□□ -1.37
CSDE1-204ENST00000369530 DDA1Q9BW61 102 aa6.46□□□□□ -1.37
CSDE1-204ENST00000369530 AMBRA1Q9C0C7 1298 aa6.46□□□□□ -1.37
CSDE1-204ENST00000369530 RHOJQ9H4E5 214 aa6.46□□□□□ -1.37
CSDE1-204ENST00000369530 TFB2MQ9H5Q4 396 aaKnown RBP6.46□□□□□ -1.37
CSDE1-204ENST00000369530 DNAJB9Q9UBS3 223 aa6.46□□□□□ -1.37
CSDE1-204ENST00000369530 TBC1D29Q9UFV1 150 aa6.46□□□□□ -1.37
CSDE1-204ENST00000369530 DMRT1Q9Y5R6 373 aa6.46□□□□□ -1.37
CSDE1-204ENST00000369530 RP1P56715 2156 aa6.46□□□□□ -1.37
CSDE1-204ENST00000369530 NCF1BA6NI72 391 aaPredicted RBP6.46□□□□□ -1.38
CSDE1-204ENST00000369530 EFCAB7A8K855 629 aa6.46□□□□□ -1.38
CSDE1-204ENST00000369530 NCF1CA8MVU1 366 aaPredicted RBP6.46□□□□□ -1.38
CSDE1-204ENST00000369530 SDHDO14521 159 aa6.46□□□□□ -1.38
CSDE1-204ENST00000369530 TRIM13O60858 407 aa6.46□□□□□ -1.38
CSDE1-204ENST00000369530 SRP72O76094 671 aaKnown RBP6.46□□□□□ -1.38
CSDE1-204ENST00000369530 HTR3BO95264 441 aa6.46□□□□□ -1.38
CSDE1-204ENST00000369530 LDLRP01130 860 aa6.46□□□□□ -1.38
CSDE1-204ENST00000369530 S100A8P05109 93 aa6.46□□□□□ -1.38
CSDE1-204ENST00000369530 PRKAR1AP10644 381 aa6.46□□□□□ -1.38
CSDE1-204ENST00000369530 NCF1P14598 390 aaPredicted RBP6.46□□□□□ -1.38
CSDE1-204ENST00000369530 MSH3P20585 1137 aa6.46□□□□□ -1.38
CSDE1-204ENST00000369530 LSSP48449 732 aa6.46□□□□□ -1.38
CSDE1-204ENST00000369530 P2RY4P51582 365 aa6.46□□□□□ -1.38
CSDE1-204ENST00000369530 KPNA2P52292 529 aaKnown RBP6.46□□□□□ -1.38
CSDE1-204ENST00000369530 MAB21L1Q13394 359 aa6.46□□□□□ -1.38
CSDE1-204ENST00000369530 PLCL1Q15111 1095 aa6.46□□□□□ -1.38
CSDE1-204ENST00000369530 FAM83EQ2M2I3 478 aa6.46□□□□□ -1.38
CSDE1-204ENST00000369530 CAPN13Q6MZZ7 669 aaPredicted RBP6.46□□□□□ -1.38
CSDE1-204ENST00000369530 MRNIPQ6NTE8 343 aa6.46□□□□□ -1.38
CSDE1-204ENST00000369530 GUSBP11Q6P575 273 aa6.46□□□□□ -1.38
CSDE1-204ENST00000369530 HSD17B13Q7Z5P4 300 aaPredicted RBP6.46□□□□□ -1.38
CSDE1-204ENST00000369530 PLD3Q8IV08 490 aa6.46□□□□□ -1.38
CSDE1-204ENST00000369530 OR4D9Q8NGE8 314 aa6.46□□□□□ -1.38
CSDE1-204ENST00000369530 IPCEF1Q8WWN9 437 aaPredicted RBP6.46□□□□□ -1.38
CSDE1-204ENST00000369530 NUS1Q96E22 293 aa6.46□□□□□ -1.38
CSDE1-204ENST00000369530 TRMT61AQ96FX7 289 aaKnown RBP6.46□□□□□ -1.38
CSDE1-204ENST00000369530 ZDHHC12Q96GR4 267 aa6.46□□□□□ -1.38
CSDE1-204ENST00000369530 GABARAPL1Q9H0R8 117 aa6.46□□□□□ -1.38
CSDE1-204ENST00000369530 ZDHHC6Q9H6R6 413 aa6.46□□□□□ -1.38
CSDE1-204ENST00000369530 ADA2Q9NZK5 511 aa6.46□□□□□ -1.38
CSDE1-204ENST00000369530 BTRCQ9Y297 605 aa6.46□□□□□ -1.38
CSDE1-204ENST00000369530 PCDHA9Q9Y5H5 950 aa6.46□□□□□ -1.38
CSDE1-204ENST00000369530 AP1M2Q9Y6Q5 423 aa6.46□□□□□ -1.38
CSDE1-204ENST00000369530 PRRC2CQ9Y520 2896 aaKnown RBP6.46□□□□□ -1.38
CSDE1-204ENST00000369530 IGHV1OR21-1A0A087WYE8 117 aa6.46□□□□□ -1.38
CSDE1-204ENST00000369530 DCDC2BA2VCK2 349 aa6.46□□□□□ -1.38
CSDE1-204ENST00000369530 NEMP2A6NFY4 417 aa6.46□□□□□ -1.38
CSDE1-204ENST00000369530 D6RAR5 112 aa6.46□□□□□ -1.38
CSDE1-204ENST00000369530 NME4O00746 187 aa6.46□□□□□ -1.38
CSDE1-204ENST00000369530 CFLARO15519 480 aa6.46□□□□□ -1.38
CSDE1-204ENST00000369530 GPR39O43194 453 aa6.46□□□□□ -1.38
CSDE1-204ENST00000369530 VPS26AO75436 327 aa6.46□□□□□ -1.38
CSDE1-204ENST00000369530 APOL3O95236 402 aa6.46□□□□□ -1.38
CSDE1-204ENST00000369530 MPOP05164 745 aa6.46□□□□□ -1.38
CSDE1-204ENST00000369530 ACSM4P0C7M7 580 aa6.46□□□□□ -1.38
CSDE1-204ENST00000369530 IFI30P13284 250 aa6.46□□□□□ -1.38
CSDE1-204ENST00000369530 HOXB6P17509 224 aaKnown RBP6.46□□□□□ -1.38
CSDE1-204ENST00000369530 ALOX12P18054 663 aa6.46□□□□□ -1.38
CSDE1-204ENST00000369530 HLA-DPA1P20036 260 aa6.46□□□□□ -1.38
CSDE1-204ENST00000369530 S100PP25815 95 aa6.46□□□□□ -1.38
CSDE1-204ENST00000369530 SOX18P35713 384 aa6.46□□□□□ -1.38
CSDE1-204ENST00000369530 HSD17B7P56937 341 aa6.46□□□□□ -1.38
CSDE1-204ENST00000369530 RRAS2P62070 204 aaPredicted RBP6.46□□□□□ -1.38
CSDE1-204ENST00000369530 ABRQ12979 859 aa6.46□□□□□ -1.38
CSDE1-204ENST00000369530 CDK5R2Q13319 367 aa6.46□□□□□ -1.38
CSDE1-204ENST00000369530 BOP1Q14137 746 aaKnown RBP6.46□□□□□ -1.38
CSDE1-204ENST00000369530 KEAP1Q14145 624 aa6.46□□□□□ -1.38
CSDE1-204ENST00000369530 GPR19Q15760 415 aa6.46□□□□□ -1.38
CSDE1-204ENST00000369530 TUSC1Q2TAM9 212 aa6.46□□□□□ -1.38
CSDE1-204ENST00000369530 HFEQ30201 348 aa6.46□□□□□ -1.38
CSDE1-204ENST00000369530 FBXO48Q5FWF7 155 aa6.46□□□□□ -1.38
CSDE1-204ENST00000369530 GPRC6AQ5T6X5 926 aa6.46□□□□□ -1.38
CSDE1-204ENST00000369530 KRT74Q7RTS7 529 aa6.46□□□□□ -1.38
CSDE1-204ENST00000369530 SLC46A3Q7Z3Q1 461 aa6.46□□□□□ -1.38
CSDE1-204ENST00000369530 PHC2Q8IXK0 858 aa6.46□□□□□ -1.38
CSDE1-204ENST00000369530 SYTL1Q8IYJ3 562 aa6.46□□□□□ -1.38
CSDE1-204ENST00000369530 SLC43A2Q8N370 569 aa6.46□□□□□ -1.38
CSDE1-204ENST00000369530 SVOPLQ8N434 492 aa6.46□□□□□ -1.38
CSDE1-204ENST00000369530 FSTL5Q8N475 847 aaPredicted RBP6.46□□□□□ -1.38
CSDE1-204ENST00000369530 RNF148Q8N7C7 305 aa6.46□□□□□ -1.38
CSDE1-204ENST00000369530 DEFB124Q8NES8 71 aa6.46□□□□□ -1.38
CSDE1-204ENST00000369530 OR4K2Q8NGD2 314 aa6.46□□□□□ -1.38
CSDE1-204ENST00000369530 LKAAEAR1Q8TD35 194 aa6.46□□□□□ -1.38
CSDE1-204ENST00000369530 LINC00052Q96N35 136 aa6.46□□□□□ -1.38
CSDE1-204ENST00000369530 SLC30A2Q9BRI3 323 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms