RNA–Protein interactions for RNA: ENST00000368671.3

CLRN3-201, Transcript of clarin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLRN3, Length 1,152 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3-201ENST00000368671 SLC30A6Q6NXT4 461 aa9.42□□□□□ -0.9
CLRN3-201ENST00000368671 FAM180BQ6P0A1 224 aa9.42□□□□□ -0.9
CLRN3-201ENST00000368671 SLC48A1Q6P1K1 146 aa9.42□□□□□ -0.9
CLRN3-201ENST00000368671 METTL2BQ6P1Q9 378 aaKnown RBP9.42□□□□□ -0.9
CLRN3-201ENST00000368671 PLXDC2Q6UX71 529 aa9.42□□□□□ -0.9
CLRN3-201ENST00000368671 RPS27LQ71UM5 84 aaKnown RBP9.42□□□□□ -0.9
CLRN3-201ENST00000368671 NUP54Q7Z3B4 507 aa9.42□□□□□ -0.9
CLRN3-201ENST00000368671 COMMD6Q7Z4G1 85 aa9.42□□□□□ -0.9
CLRN3-201ENST00000368671 MILR1Q7Z6M3 343 aa9.42□□□□□ -0.9
CLRN3-201ENST00000368671 METTL4Q8N3J2 472 aa9.42□□□□□ -0.9
CLRN3-201ENST00000368671 SIMC1Q8NDZ2 872 aa9.42□□□□□ -0.9
CLRN3-201ENST00000368671 OR4F6Q8NGB9 312 aa9.42□□□□□ -0.9
CLRN3-201ENST00000368671 OR52R1Q8NGF1 315 aa9.42□□□□□ -0.9
CLRN3-201ENST00000368671 OR14L1PQ8NHC6 308 aa9.42□□□□□ -0.9
CLRN3-201ENST00000368671 HGDQ93099 445 aa9.42□□□□□ -0.9
CLRN3-201ENST00000368671 KLHL29Q96CT2 875 aa9.42□□□□□ -0.9
CLRN3-201ENST00000368671 MBD6Q96DN6 1003 aa9.42□□□□□ -0.9
CLRN3-201ENST00000368671 ZNF837Q96EG3 531 aaPredicted RBP9.42□□□□□ -0.9
CLRN3-201ENST00000368671 LCORQ96JN0 433 aaPredicted RBP9.42□□□□□ -0.9
CLRN3-201ENST00000368671 TUBA1CQ9BQE3 449 aa9.42□□□□□ -0.9
CLRN3-201ENST00000368671 NTMT1Q9BV86 223 aa9.42□□□□□ -0.9
CLRN3-201ENST00000368671 RBM24Q9BX46 236 aaKnown RBP9.42□□□□□ -0.9
CLRN3-201ENST00000368671 ELOVL6Q9H5J4 265 aa9.42□□□□□ -0.9
CLRN3-201ENST00000368671 CALHM2Q9HA72 323 aa9.42□□□□□ -0.9
CLRN3-201ENST00000368671 ZBTB26Q9HCK0 441 aa9.42□□□□□ -0.9
CLRN3-201ENST00000368671 SERHLQ9NQF3 203 aa9.42□□□□□ -0.9
CLRN3-201ENST00000368671 FARSBQ9NSD9 589 aaKnown RBP9.42□□□□□ -0.9
CLRN3-201ENST00000368671 XPR1Q9UBH6 696 aa9.42□□□□□ -0.9
CLRN3-201ENST00000368671 ADAM29Q9UKF5 820 aa9.42□□□□□ -0.9
CLRN3-201ENST00000368671 PCTPQ9UKL6 214 aa9.42□□□□□ -0.9
CLRN3-201ENST00000368671 CFL2Q9Y281 166 aa9.42□□□□□ -0.9
CLRN3-201ENST00000368671 PLLPQ9Y342 182 aa9.42□□□□□ -0.9
CLRN3-201ENST00000368671 HIVEP1P15822 2718 aa9.41□□□□□ -0.9
CLRN3-201ENST00000368671 POLQO75417 2590 aa9.41□□□□□ -0.9
CLRN3-201ENST00000368671 PRAMEF25A6NGN4 478 aa9.41□□□□□ -0.9
CLRN3-201ENST00000368671 A6NJY4 79 aa9.41□□□□□ -0.9
CLRN3-201ENST00000368671 STX16-NPEPL1H3BU86 382 aa9.41□□□□□ -0.9
CLRN3-201ENST00000368671 STX16O14662 325 aa9.41□□□□□ -0.9
CLRN3-201ENST00000368671 UGT2B11O75310 529 aa9.41□□□□□ -0.9
CLRN3-201ENST00000368671 GUCY1B2O75343 617 aa9.41□□□□□ -0.9
CLRN3-201ENST00000368671 IL18BPO95998 194 aa9.41□□□□□ -0.9
CLRN3-201ENST00000368671 PDYNP01213 254 aa9.41□□□□□ -0.9
CLRN3-201ENST00000368671 ATP1B1P05026 303 aa9.41□□□□□ -0.9
CLRN3-201ENST00000368671 RBP1P09455 135 aa9.41□□□□□ -0.9
CLRN3-201ENST00000368671 RHOXF2BP0C7M4 288 aa9.41□□□□□ -0.9
CLRN3-201ENST00000368671 DRD2P14416 443 aa9.41□□□□□ -0.9
CLRN3-201ENST00000368671 NAGAP17050 411 aa9.41□□□□□ -0.9
CLRN3-201ENST00000368671 TSPAN8P19075 237 aa9.41□□□□□ -0.9
CLRN3-201ENST00000368671 CSNK2A2P19784 350 aaPredicted RBP9.41□□□□□ -0.9
CLRN3-201ENST00000368671 TCEA1P23193 301 aaKnown RBP9.41□□□□□ -0.9
CLRN3-201ENST00000368671 CPA2P48052 419 aa9.41□□□□□ -0.9
CLRN3-201ENST00000368671 SORDQ00796 357 aa9.41□□□□□ -0.9
CLRN3-201ENST00000368671 MGAT2Q10469 447 aa9.41□□□□□ -0.9
CLRN3-201ENST00000368671 MAP4K2Q12851 820 aa9.41□□□□□ -0.9
CLRN3-201ENST00000368671 TRMT12Q53H54 448 aaKnown RBP9.41□□□□□ -0.9
CLRN3-201ENST00000368671 WFDC11Q8NEX6 87 aa9.41□□□□□ -0.9
CLRN3-201ENST00000368671 ZPLD1Q8TCW7 415 aa9.41□□□□□ -0.9
CLRN3-201ENST00000368671 SLC44A1Q8WWI5 657 aa9.41□□□□□ -0.9
CLRN3-201ENST00000368671 SELENOMQ8WWX9 145 aa9.41□□□□□ -0.9
CLRN3-201ENST00000368671 TM4SF18Q96CE8 201 aa9.41□□□□□ -0.9
CLRN3-201ENST00000368671 NTNG2Q96CW9 530 aa9.41□□□□□ -0.9
CLRN3-201ENST00000368671 PFDN4Q9NQP4 134 aa9.41□□□□□ -0.9
CLRN3-201ENST00000368671 DLL4Q9NR61 685 aa9.41□□□□□ -0.9
CLRN3-201ENST00000368671 GALNT8Q9NY28 637 aa9.41□□□□□ -0.9
CLRN3-201ENST00000368671 NINJ2Q9NZG7 142 aa9.41□□□□□ -0.9
CLRN3-201ENST00000368671 JKAMPQ9P055 326 aa9.41□□□□□ -0.9
CLRN3-201ENST00000368671 CES1P1Q9UKY3 287 aa9.41□□□□□ -0.9
CLRN3-201ENST00000368671 TMCO1Q9UM00 188 aa9.41□□□□□ -0.9
CLRN3-201ENST00000368671 A0A1B0GTL3 188 aa9.4□□□□□ -0.9
CLRN3-201ENST00000368671 ACOX3O15254 700 aa9.4□□□□□ -0.9
CLRN3-201ENST00000368671 REM1O75628 298 aa9.4□□□□□ -0.9
CLRN3-201ENST00000368671 CBR3O75828 277 aa9.4□□□□□ -0.9
CLRN3-201ENST00000368671 ESRRBO95718 433 aa9.4□□□□□ -0.9
CLRN3-201ENST00000368671 CBX7O95931 251 aa9.4□□□□□ -0.9
CLRN3-201ENST00000368671 INHBAP08476 426 aa9.4□□□□□ -0.9
CLRN3-201ENST00000368671 CPN1P15169 458 aa9.4□□□□□ -0.9
CLRN3-201ENST00000368671 PCSK2P16519 638 aa9.4□□□□□ -0.9
CLRN3-201ENST00000368671 STARP49675 285 aa9.4□□□□□ -0.9
CLRN3-201ENST00000368671 CDH13P55290 713 aa9.4□□□□□ -0.9
CLRN3-201ENST00000368671 MRPS35P82673 323 aaKnown RBP9.4□□□□□ -0.9
CLRN3-201ENST00000368671 GALNT1Q10472 559 aaPredicted RBP9.4□□□□□ -0.9
CLRN3-201ENST00000368671 GGTA1PQ4G0N0 100 aa9.4□□□□□ -0.9
CLRN3-201ENST00000368671 C8orf74Q6P047 294 aa9.4□□□□□ -0.9
CLRN3-201ENST00000368671 TMEM81Q6P7N7 255 aa9.4□□□□□ -0.9
CLRN3-201ENST00000368671 ENPP6Q6UWR7 440 aa9.4□□□□□ -0.9
CLRN3-201ENST00000368671 SYT10Q6XYQ8 523 aa9.4□□□□□ -0.9
CLRN3-201ENST00000368671 Q71RC1 249 aaPredicted RBP9.4□□□□□ -0.9
CLRN3-201ENST00000368671 IFNEQ86WN2 208 aa9.4□□□□□ -0.9
CLRN3-201ENST00000368671 TRIM42Q8IWZ5 723 aa9.4□□□□□ -0.9
CLRN3-201ENST00000368671 GCNT2Q8N0V5 402 aa9.4□□□□□ -0.9
CLRN3-201ENST00000368671 C1orf52Q8N6N3 182 aaKnown RBP9.4□□□□□ -0.9
CLRN3-201ENST00000368671 WDSUB1Q8N9V3 476 aa9.4□□□□□ -0.9
CLRN3-201ENST00000368671 TRPC4APQ8TEL6 797 aa9.4□□□□□ -0.9
CLRN3-201ENST00000368671 ANP32BQ92688 251 aaKnown RBP9.4□□□□□ -0.9
CLRN3-201ENST00000368671 TMBIM1Q969X1 311 aa9.4□□□□□ -0.9
CLRN3-201ENST00000368671 INTS12Q96CB8 462 aaKnown RBP9.4□□□□□ -0.9
CLRN3-201ENST00000368671 TMCO6Q96DC7 493 aa9.4□□□□□ -0.9
CLRN3-201ENST00000368671 HBEGFQ99075 208 aa9.4□□□□□ -0.9
CLRN3-201ENST00000368671 TM9SF2Q99805 663 aa9.4□□□□□ -0.9
CLRN3-201ENST00000368671 SFXN3Q9BWM7 321 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms