RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 AGFG1P52594 562 aaKnown RBP14.58□□□□□ -0.08
CKS1B-202ENST00000368436 PLCXD2Q0VAA5 305 aa14.58□□□□□ -0.08
CKS1B-202ENST00000368436 RCAN2Q14206 197 aa14.58□□□□□ -0.08
CKS1B-202ENST00000368436 LTB4RQ15722 352 aa14.58□□□□□ -0.08
CKS1B-202ENST00000368436 ADGRE4PQ86SQ3 457 aa14.58□□□□□ -0.08
CKS1B-202ENST00000368436 MED12LQ86YW9 2145 aa14.58□□□□□ -0.08
CKS1B-202ENST00000368436 C1orf52Q8N6N3 182 aaKnown RBP14.58□□□□□ -0.08
CKS1B-202ENST00000368436 C9orf106Q8NAJ2 232 aa14.58□□□□□ -0.08
CKS1B-202ENST00000368436 OR52R1Q8NGF1 315 aa14.58□□□□□ -0.08
CKS1B-202ENST00000368436 POM121Q96HA1 1249 aa14.58□□□□□ -0.08
CKS1B-202ENST00000368436 ALPK1Q96QP1 1244 aa14.58□□□□□ -0.08
CKS1B-202ENST00000368436 UCN2Q96RP3 112 aa14.58□□□□□ -0.08
CKS1B-202ENST00000368436 FAIM2Q9BWQ8 316 aa14.58□□□□□ -0.08
CKS1B-202ENST00000368436 GALNT9Q9HCQ5 603 aa14.58□□□□□ -0.08
CKS1B-202ENST00000368436 HEY2Q9UBP5 337 aa14.58□□□□□ -0.08
CKS1B-202ENST00000368436 VPS29Q9UBQ0 182 aa14.58□□□□□ -0.08
CKS1B-202ENST00000368436 PLEKHA6Q9Y2H5 1048 aa14.58□□□□□ -0.08
CKS1B-202ENST00000368436 GPR55Q9Y2T6 319 aaPredicted RBP14.58□□□□□ -0.08
CKS1B-202ENST00000368436 ZNF780BQ9Y6R6 833 aa14.58□□□□□ -0.08
CKS1B-202ENST00000368436 PRAMEF25A6NGN4 478 aa14.57□□□□□ -0.08
CKS1B-202ENST00000368436 FRG2CA6NGY1 282 aa14.57□□□□□ -0.08
CKS1B-202ENST00000368436 OR6C70A6NIJ9 312 aa14.57□□□□□ -0.08
CKS1B-202ENST00000368436 TRIM49D1C9J1S8 452 aa14.57□□□□□ -0.08
CKS1B-202ENST00000368436 POC1B-GALNT4F8VUJ3 575 aa14.57□□□□□ -0.08
CKS1B-202ENST00000368436 DIAPH2O60879 1101 aa14.57□□□□□ -0.08
CKS1B-202ENST00000368436 OR4F21O95013 312 aa14.57□□□□□ -0.08
CKS1B-202ENST00000368436 TMIGD3P0DMS9 266 aaPredicted RBP14.57□□□□□ -0.08
CKS1B-202ENST00000368436 HSD3B1P14060 373 aa14.57□□□□□ -0.08
CKS1B-202ENST00000368436 PCSK2P16519 638 aa14.57□□□□□ -0.08
CKS1B-202ENST00000368436 HSD3B2P26439 372 aa14.57□□□□□ -0.08
CKS1B-202ENST00000368436 GCKP35557 465 aa14.57□□□□□ -0.08
CKS1B-202ENST00000368436 MRPS35P82673 323 aaKnown RBP14.57□□□□□ -0.08
CKS1B-202ENST00000368436 CLCQ05315 142 aa14.57□□□□□ -0.08
CKS1B-202ENST00000368436 ZNF628Q5EBL2 1059 aa14.57□□□□□ -0.08
CKS1B-202ENST00000368436 FAM219BQ5XKK7 198 aa14.57□□□□□ -0.08
CKS1B-202ENST00000368436 FAM180BQ6P0A1 224 aa14.57□□□□□ -0.08
CKS1B-202ENST00000368436 PAMR1Q6UXH9 720 aa14.57□□□□□ -0.08
CKS1B-202ENST00000368436 CAMKMTQ7Z624 323 aa14.57□□□□□ -0.08
CKS1B-202ENST00000368436 MMGT1Q8N4V1 131 aa14.57□□□□□ -0.08
CKS1B-202ENST00000368436 ZNF675Q8TD23 568 aa14.57□□□□□ -0.08
CKS1B-202ENST00000368436 SLC35A4Q96G79 324 aa14.57□□□□□ -0.08
CKS1B-202ENST00000368436 ZFP3Q96NJ6 502 aa14.57□□□□□ -0.08
CKS1B-202ENST00000368436 TUBA1CQ9BQE3 449 aa14.57□□□□□ -0.08
CKS1B-202ENST00000368436 SERHLQ9NQF3 203 aa14.57□□□□□ -0.08
CKS1B-202ENST00000368436 KLRF1Q9NZS2 232 aa14.57□□□□□ -0.08
CKS1B-202ENST00000368436 DMGDHQ9UI17 866 aaKnown RBP14.57□□□□□ -0.08
CKS1B-202ENST00000368436 MCM8Q9UJA3 840 aa14.57□□□□□ -0.08
CKS1B-202ENST00000368436 MAPRE3Q9UPY8 281 aa14.57□□□□□ -0.08
CKS1B-202ENST00000368436 ABCA4P78363 2273 aa14.57□□□□□ -0.08
CKS1B-202ENST00000368436 MANBAO00462 879 aa14.56□□□□□ -0.08
CKS1B-202ENST00000368436 BCAS2O75934 225 aaPredicted RBP14.56□□□□□ -0.08
CKS1B-202ENST00000368436 RCBTB2O95199 551 aa14.56□□□□□ -0.08
CKS1B-202ENST00000368436 GOSR1O95249 250 aa14.56□□□□□ -0.08
CKS1B-202ENST00000368436 ECHS1P30084 290 aa14.56□□□□□ -0.08
CKS1B-202ENST00000368436 ALDH9A1P49189 494 aa14.56□□□□□ -0.08
CKS1B-202ENST00000368436 GFRA1P56159 465 aa14.56□□□□□ -0.08
CKS1B-202ENST00000368436 PPP2R2AP63151 447 aa14.56□□□□□ -0.08
CKS1B-202ENST00000368436 HMGCS1Q01581 520 aa14.56□□□□□ -0.08
CKS1B-202ENST00000368436 FOXF2Q12947 444 aa14.56□□□□□ -0.08
CKS1B-202ENST00000368436 CSTF3Q12996 717 aaKnown RBP14.56□□□□□ -0.08
CKS1B-202ENST00000368436 UNC50Q53HI1 259 aa14.56□□□□□ -0.08
CKS1B-202ENST00000368436 TCHHL1Q5QJ38 904 aaPredicted RBP14.56□□□□□ -0.08
CKS1B-202ENST00000368436 ENPP6Q6UWR7 440 aa14.56□□□□□ -0.08
CKS1B-202ENST00000368436 CCDC116Q8IYX3 515 aa14.56□□□□□ -0.08
CKS1B-202ENST00000368436 OR14L1PQ8NHC6 308 aa14.56□□□□□ -0.08
CKS1B-202ENST00000368436 LINC01560Q8TB33 94 aa14.56□□□□□ -0.08
CKS1B-202ENST00000368436 RNF138Q8WVD3 245 aa14.56□□□□□ -0.08
CKS1B-202ENST00000368436 TMBIM1Q969X1 311 aa14.56□□□□□ -0.08
CKS1B-202ENST00000368436 TMCO6Q96DC7 493 aa14.56□□□□□ -0.08
CKS1B-202ENST00000368436 ERP27Q96DN0 273 aa14.56□□□□□ -0.08
CKS1B-202ENST00000368436 COL21A1Q96P44 957 aa14.56□□□□□ -0.08
CKS1B-202ENST00000368436 BTBD9Q96Q07 612 aa14.56□□□□□ -0.08
CKS1B-202ENST00000368436 HBEGFQ99075 208 aa14.56□□□□□ -0.08
CKS1B-202ENST00000368436 EHD3Q9NZN3 535 aa14.56□□□□□ -0.08
CKS1B-202ENST00000368436 UTS2RQ9UKP6 389 aa14.56□□□□□ -0.08
CKS1B-202ENST00000368436 MRPS18CQ9Y3D5 142 aaKnown RBP14.56□□□□□ -0.08
CKS1B-202ENST00000368436 EEF1E1-BLOC1S5C9J1V9 151 aa14.55□□□□□ -0.08
CKS1B-202ENST00000368436 EEF1E1O43324 174 aaKnown RBP14.55□□□□□ -0.08
CKS1B-202ENST00000368436 TSPAN2O60636 221 aa14.55□□□□□ -0.08
CKS1B-202ENST00000368436 ERN1O75460 977 aaKnown RBP14.55□□□□□ -0.08
CKS1B-202ENST00000368436 KRT6AP02538 564 aa14.55□□□□□ -0.08
CKS1B-202ENST00000368436 KRT6BP04259 564 aa14.55□□□□□ -0.08
CKS1B-202ENST00000368436 SNRPAP09012 282 aaKnown RBP14.55□□□□□ -0.08
CKS1B-202ENST00000368436 CT45A8P0DMV1 189 aa14.55□□□□□ -0.08
CKS1B-202ENST00000368436 CT45A9P0DMV2 189 aa14.55□□□□□ -0.08
CKS1B-202ENST00000368436 DRD2P14416 443 aa14.55□□□□□ -0.08
CKS1B-202ENST00000368436 CHN1P15882 459 aa14.55□□□□□ -0.08
CKS1B-202ENST00000368436 SRD5A2P31213 254 aa14.55□□□□□ -0.08
CKS1B-202ENST00000368436 KRT6CP48668 564 aa14.55□□□□□ -0.08
CKS1B-202ENST00000368436 DGKQP52824 942 aa14.55□□□□□ -0.08
CKS1B-202ENST00000368436 RAE1P78406 368 aaKnown RBP14.55□□□□□ -0.08
CKS1B-202ENST00000368436 FOXD4Q12950 439 aaPredicted RBP14.55□□□□□ -0.08
CKS1B-202ENST00000368436 RASA2Q15283 850 aa14.55□□□□□ -0.08
CKS1B-202ENST00000368436 CT45A2Q5DJT8 189 aa14.55□□□□□ -0.08
CKS1B-202ENST00000368436 ZNF678Q5SXM1 525 aa14.55□□□□□ -0.08
CKS1B-202ENST00000368436 PLCZ1Q86YW0 608 aa14.55□□□□□ -0.08
CKS1B-202ENST00000368436 TRIM42Q8IWZ5 723 aa14.55□□□□□ -0.08
CKS1B-202ENST00000368436 CDYL2Q8N8U2 506 aa14.55□□□□□ -0.08
CKS1B-202ENST00000368436 WNT2BQ93097 391 aa14.55□□□□□ -0.08
CKS1B-202ENST00000368436 FMO2Q99518 471 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms