RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 Q6ZPB1 254 aaPredicted RBP13.16□□□□□ -0.3
USF1-202ENST00000368020 USP53Q70EK8 1073 aa13.16□□□□□ -0.3
USF1-202ENST00000368020 OOSP2Q86WS3 158 aa13.16□□□□□ -0.3
USF1-202ENST00000368020 KCT2Q8NC54 265 aa13.16□□□□□ -0.3
USF1-202ENST00000368020 OR9A2Q8NGT5 310 aa13.16□□□□□ -0.3
USF1-202ENST00000368020 ADAMTS15Q8TE58 950 aa13.16□□□□□ -0.3
USF1-202ENST00000368020 PMM1Q92871 262 aa13.16□□□□□ -0.3
USF1-202ENST00000368020 C10orf90Q96M02 699 aa13.16□□□□□ -0.3
USF1-202ENST00000368020 PRMT8Q9NR22 394 aaPredicted RBP13.16□□□□□ -0.3
USF1-202ENST00000368020 CPNE7Q9UBL6 633 aa13.16□□□□□ -0.3
USF1-202ENST00000368020 AASSQ9UDR5 926 aa13.16□□□□□ -0.3
USF1-202ENST00000368020 PILRAQ9UKJ1 303 aa13.16□□□□□ -0.3
USF1-202ENST00000368020 DAPP1Q9UN19 280 aa13.16□□□□□ -0.3
USF1-202ENST00000368020 HEMK1Q9Y5R4 338 aaPredicted RBP13.16□□□□□ -0.3
USF1-202ENST00000368020 A0A0J9YY10 115 aa13.15□□□□□ -0.3
USF1-202ENST00000368020 OR6C74A6NCV1 312 aa13.15□□□□□ -0.3
USF1-202ENST00000368020 STATHP02808 62 aa13.15□□□□□ -0.3
USF1-202ENST00000368020 ALOX12P18054 663 aa13.15□□□□□ -0.3
USF1-202ENST00000368020 UGT2B10P36537 528 aa13.15□□□□□ -0.3
USF1-202ENST00000368020 FUT5Q11128 374 aa13.15□□□□□ -0.3
USF1-202ENST00000368020 ST3GAL4Q11206 333 aa13.15□□□□□ -0.3
USF1-202ENST00000368020 TARDBPQ13148 414 aaKnown RBP eCLIP13.15□□□□□ -0.3
USF1-202ENST00000368020 IRF3Q14653 427 aa13.15□□□□□ -0.3
USF1-202ENST00000368020 EIPR1Q53HC9 387 aa13.15□□□□□ -0.3
USF1-202ENST00000368020 ZNF311Q5JNZ3 666 aa13.15□□□□□ -0.3
USF1-202ENST00000368020 SLC25A30Q5SVS4 291 aa13.15□□□□□ -0.3
USF1-202ENST00000368020 TPRG1LQ5T0D9 272 aa13.15□□□□□ -0.3
USF1-202ENST00000368020 C12orf73Q69YU5 71 aa13.15□□□□□ -0.3
USF1-202ENST00000368020 HEPHL1Q6MZM0 1159 aa13.15□□□□□ -0.3
USF1-202ENST00000368020 C16orf87Q6PH81 154 aa13.15□□□□□ -0.3
USF1-202ENST00000368020 RNF44Q7L0R7 432 aa13.15□□□□□ -0.3
USF1-202ENST00000368020 SLCO6A1Q86UG4 719 aa13.15□□□□□ -0.3
USF1-202ENST00000368020 OR2L13Q8N349 312 aa13.15□□□□□ -0.3
USF1-202ENST00000368020 CCL4L1Q8NHW4 92 aa13.15□□□□□ -0.3
USF1-202ENST00000368020 BAHD1Q8TBE0 780 aaPredicted RBP13.15□□□□□ -0.3
USF1-202ENST00000368020 SLC7A13Q8TCU3 470 aa13.15□□□□□ -0.3
USF1-202ENST00000368020 ZNF675Q8TD23 568 aa13.15□□□□□ -0.3
USF1-202ENST00000368020 JPH3Q8WXH2 748 aaPredicted RBP13.15□□□□□ -0.3
USF1-202ENST00000368020 TANKQ92844 425 aa13.15□□□□□ -0.3
USF1-202ENST00000368020 PPP1R14BQ96C90 147 aa13.15□□□□□ -0.3
USF1-202ENST00000368020 TOE1Q96GM8 510 aaKnown RBP13.15□□□□□ -0.3
USF1-202ENST00000368020 POLR2J2Q9GZM3 115 aaKnown RBP13.15□□□□□ -0.3
USF1-202ENST00000368020 EVA1AQ9H8M9 152 aa13.15□□□□□ -0.3
USF1-202ENST00000368020 CD93Q9NPY3 652 aa13.15□□□□□ -0.3
USF1-202ENST00000368020 KCMF1Q9P0J7 381 aa13.15□□□□□ -0.3
USF1-202ENST00000368020 ZNF232Q9UNY5 417 aa13.15□□□□□ -0.3
USF1-202ENST00000368020 CA5BQ9Y2D0 317 aa13.15□□□□□ -0.3
USF1-202ENST00000368020 KLHL20Q9Y2M5 609 aa13.15□□□□□ -0.3
USF1-202ENST00000368020 RPL36Q9Y3U8 105 aaKnown RBP13.15□□□□□ -0.3
USF1-202ENST00000368020 SLC22A7Q9Y694 548 aa13.15□□□□□ -0.3
USF1-202ENST00000368020 IGHV1OR15-9A0A0B4J2B8 117 aa13.14□□□□□ -0.31
USF1-202ENST00000368020 A0A1B0GVG6 124 aa13.14□□□□□ -0.31
USF1-202ENST00000368020 IRGMA1A4Y4 181 aa13.14□□□□□ -0.31
USF1-202ENST00000368020 SNTNA6NMZ2 147 aa13.14□□□□□ -0.31
USF1-202ENST00000368020 EFCAB9A8MZ26 197 aa13.14□□□□□ -0.31
USF1-202ENST00000368020 CLDN25C9JDP6 229 aa13.14□□□□□ -0.31
USF1-202ENST00000368020 H3BN98 237 aa13.14□□□□□ -0.31
USF1-202ENST00000368020 TMX2-CTNND1H3BSU7 103 aa13.14□□□□□ -0.31
USF1-202ENST00000368020 C8orf89P0DMQ9 161 aa13.14□□□□□ -0.31
USF1-202ENST00000368020 POLR2CP19387 275 aaPredicted RBP13.14□□□□□ -0.31
USF1-202ENST00000368020 POU1F1P28069 291 aa13.14□□□□□ -0.31
USF1-202ENST00000368020 ALDH4A1P30038 563 aa13.14□□□□□ -0.31
USF1-202ENST00000368020 TGFBR2P37173 567 aa13.14□□□□□ -0.31
USF1-202ENST00000368020 CLK1P49759 484 aaKnown RBP13.14□□□□□ -0.31
USF1-202ENST00000368020 BMXP51813 675 aa13.14□□□□□ -0.31
USF1-202ENST00000368020 SKP1P63208 163 aa13.14□□□□□ -0.31
USF1-202ENST00000368020 UBE2IP63279 158 aaKnown RBP13.14□□□□□ -0.31
USF1-202ENST00000368020 ST3GAL3Q11203 375 aa13.14□□□□□ -0.31
USF1-202ENST00000368020 SEC23BQ15437 767 aa13.14□□□□□ -0.31
USF1-202ENST00000368020 ENTPD8Q5MY95 495 aa13.14□□□□□ -0.31
USF1-202ENST00000368020 PLAG1Q6DJT9 500 aa13.14□□□□□ -0.31
USF1-202ENST00000368020 MFSD12Q6NUT3 480 aa13.14□□□□□ -0.31
USF1-202ENST00000368020 NIPAL1Q6NVV3 410 aa13.14□□□□□ -0.31
USF1-202ENST00000368020 C1orf94Q6P1W5 598 aa13.14□□□□□ -0.31
USF1-202ENST00000368020 ZCCHC12Q6PEW1 402 aa13.14□□□□□ -0.31
USF1-202ENST00000368020 ADCK1Q86TW2 530 aa13.14□□□□□ -0.31
USF1-202ENST00000368020 B3GNT7Q8NFL0 401 aa13.14□□□□□ -0.31
USF1-202ENST00000368020 KBTBD8Q8NFY9 601 aa13.14□□□□□ -0.31
USF1-202ENST00000368020 OR10G6Q8NH81 332 aa13.14□□□□□ -0.31
USF1-202ENST00000368020 LGALS12Q96DT0 336 aa13.14□□□□□ -0.31
USF1-202ENST00000368020 OTUB1Q96FW1 271 aaPredicted RBP13.14□□□□□ -0.31
USF1-202ENST00000368020 ARHGDIGQ99819 225 aa13.14□□□□□ -0.31
USF1-202ENST00000368020 RHNO1Q9BSD3 238 aa13.14□□□□□ -0.31
USF1-202ENST00000368020 TEX12Q9BXU0 123 aa13.14□□□□□ -0.31
USF1-202ENST00000368020 SLC38A1Q9H2H9 487 aa13.14□□□□□ -0.31
USF1-202ENST00000368020 KRCC1Q9NPI7 259 aaPredicted RBP13.14□□□□□ -0.31
USF1-202ENST00000368020 GPR83Q9NYM4 423 aa13.14□□□□□ -0.31
USF1-202ENST00000368020 CYP8B1Q9UNU6 501 aa13.14□□□□□ -0.31
USF1-202ENST00000368020 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.13□□□□□ -0.31
USF1-202ENST00000368020 A0A087WV62 115 aa13.13□□□□□ -0.31
USF1-202ENST00000368020 A0A0J9YVX5 310 aa13.13□□□□□ -0.31
USF1-202ENST00000368020 M0R3H8 397 aa13.13□□□□□ -0.31
USF1-202ENST00000368020 CTSVO60911 334 aa13.13□□□□□ -0.31
USF1-202ENST00000368020 SEMA7AO75326 666 aa13.13□□□□□ -0.31
USF1-202ENST00000368020 AK1P00568 194 aa13.13□□□□□ -0.31
USF1-202ENST00000368020 RPLP0P05388 317 aaKnown RBP13.13□□□□□ -0.31
USF1-202ENST00000368020 LCKP06239 509 aa13.13□□□□□ -0.31
USF1-202ENST00000368020 PORP16435 677 aaPredicted RBP13.13□□□□□ -0.31
USF1-202ENST00000368020 SLC15A1P46059 708 aa13.13□□□□□ -0.31
USF1-202ENST00000368020 TAS2R41P59536 307 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms