RNA–Protein interactions for RNA: ENST00000366896.5

PRKN-204, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-204ENST00000366896 SLC9B2Q86UD5 537 aa13.88□□□□□ -0.19
PRKN-204ENST00000366896 TRAPPC5Q8IUR0 188 aa13.88□□□□□ -0.19
PRKN-204ENST00000366896 SFTPA1Q8IWL2 248 aa13.88□□□□□ -0.19
PRKN-204ENST00000366896 OR9Q1Q8NGQ5 310 aa13.88□□□□□ -0.19
PRKN-204ENST00000366896 COQ7Q99807 217 aa13.88□□□□□ -0.19
PRKN-204ENST00000366896 OR2AG1Q9H205 316 aa13.88□□□□□ -0.19
PRKN-204ENST00000366896 SLAMF7Q9NQ25 335 aa13.88□□□□□ -0.19
PRKN-204ENST00000366896 MIEF1Q9NQG6 463 aa13.88□□□□□ -0.19
PRKN-204ENST00000366896 PRELID1Q9Y255 219 aa13.88□□□□□ -0.19
PRKN-204ENST00000366896 RPL36Q9Y3U8 105 aaKnown RBP13.88□□□□□ -0.19
PRKN-204ENST00000366896 CLEC2LP0C7M8 214 aa13.87□□□□□ -0.19
PRKN-204ENST00000366896 DDCP20711 480 aa13.87□□□□□ -0.19
PRKN-204ENST00000366896 FRKP42685 505 aaPredicted RBP13.87□□□□□ -0.19
PRKN-204ENST00000366896 ALDH6A1Q02252 535 aaKnown RBP13.87□□□□□ -0.19
PRKN-204ENST00000366896 SEC23BQ15437 767 aa13.87□□□□□ -0.19
PRKN-204ENST00000366896 TNFAIP8L2Q6P589 184 aaPredicted RBP13.87□□□□□ -0.19
PRKN-204ENST00000366896 FAM129CQ86XR2 697 aa13.87□□□□□ -0.19
PRKN-204ENST00000366896 KRT78Q8N1N4 520 aa13.87□□□□□ -0.19
PRKN-204ENST00000366896 PROKR2Q8NFJ6 384 aa13.87□□□□□ -0.19
PRKN-204ENST00000366896 OR8J1Q8NGP2 316 aa13.87□□□□□ -0.19
PRKN-204ENST00000366896 PLAGL1Q9UM63 463 aa13.87□□□□□ -0.19
PRKN-204ENST00000366896 SNX11Q9Y5W9 270 aa13.87□□□□□ -0.19
PRKN-204ENST00000366896 LEUTXA8MZ59 168 aa13.87□□□□□ -0.19
PRKN-204ENST00000366896 HCN1O60741 890 aa13.87□□□□□ -0.19
PRKN-204ENST00000366896 BCHEP06276 602 aa13.87□□□□□ -0.19
PRKN-204ENST00000366896 PRKACBP22694 351 aa13.87□□□□□ -0.19
PRKN-204ENST00000366896 SNRPD2P62316 118 aaKnown RBP13.87□□□□□ -0.19
PRKN-204ENST00000366896 CDONQ4KMG0 1287 aa13.87□□□□□ -0.19
PRKN-204ENST00000366896 CCNJQ5T5M9 372 aa13.87□□□□□ -0.19
PRKN-204ENST00000366896 LIPKQ5VXJ0 399 aa13.87□□□□□ -0.19
PRKN-204ENST00000366896 TMIGD1Q6UXZ0 262 aa13.87□□□□□ -0.19
PRKN-204ENST00000366896 CD300LDQ6UXZ3 194 aa13.87□□□□□ -0.19
PRKN-204ENST00000366896 CEACAM20Q6UY09 585 aa13.87□□□□□ -0.19
PRKN-204ENST00000366896 HORMAD2Q8N7B1 307 aa13.87□□□□□ -0.19
PRKN-204ENST00000366896 DUSP18Q8NEJ0 188 aa13.87□□□□□ -0.19
PRKN-204ENST00000366896 GPR32P1Q8NGA4 272 aa13.87□□□□□ -0.19
PRKN-204ENST00000366896 MARVELD3Q96A59 401 aa13.87□□□□□ -0.19
PRKN-204ENST00000366896 FUZQ9BT04 418 aa13.87□□□□□ -0.19
PRKN-204ENST00000366896 ABCG4Q9H172 646 aa13.87□□□□□ -0.19
PRKN-204ENST00000366896 RHBGQ9H310 441 aa13.87□□□□□ -0.19
PRKN-204ENST00000366896 RBFOX1Q9NWB1 397 aaKnown RBP13.87□□□□□ -0.19
PRKN-204ENST00000366896 ING3Q9NXR8 418 aa13.87□□□□□ -0.19
PRKN-204ENST00000366896 DNAJC27Q9NZQ0 273 aa13.87□□□□□ -0.19
PRKN-204ENST00000366896 NDRG2Q9UN36 371 aaKnown RBP13.87□□□□□ -0.19
PRKN-204ENST00000366896 PLXND1Q9Y4D7 1925 aa13.86□□□□□ -0.19
PRKN-204ENST00000366896 MUC22E2RYF6 1773 aaPredicted RBP13.86□□□□□ -0.19
PRKN-204ENST00000366896 CCDC88CQ9P219 2028 aa13.86□□□□□ -0.19
PRKN-204ENST00000366896 C5orf58C9J3I9 102 aa13.86□□□□□ -0.19
PRKN-204ENST00000366896 SPINT1O43278 529 aa13.86□□□□□ -0.19
PRKN-204ENST00000366896 NARSO43776 548 aaKnown RBP13.86□□□□□ -0.19
PRKN-204ENST00000366896 KAT7O95251 611 aa13.86□□□□□ -0.19
PRKN-204ENST00000366896 FAM157BP0CG42 384 aa13.86□□□□□ -0.19
PRKN-204ENST00000366896 ACADMP11310 421 aa13.86□□□□□ -0.19
PRKN-204ENST00000366896 ELAVL4P26378 380 aaKnown RBP13.86□□□□□ -0.19
PRKN-204ENST00000366896 ACADLP28330 430 aa13.86□□□□□ -0.19
PRKN-204ENST00000366896 SSTR4P31391 388 aa13.86□□□□□ -0.19
PRKN-204ENST00000366896 SLC9A3P48764 834 aa13.86□□□□□ -0.19
PRKN-204ENST00000366896 ZNF628Q5EBL2 1059 aa13.86□□□□□ -0.19
PRKN-204ENST00000366896 DCST1Q5T197 706 aa13.86□□□□□ -0.19
PRKN-204ENST00000366896 TCTN3Q6NUS6 607 aa13.86□□□□□ -0.19
PRKN-204ENST00000366896 TRMT11Q7Z4G4 463 aaKnown RBP13.86□□□□□ -0.19
PRKN-204ENST00000366896 FAM20CQ8IXL6 584 aa13.86□□□□□ -0.19
PRKN-204ENST00000366896 SLC38A5Q8WUX1 472 aa13.86□□□□□ -0.19
PRKN-204ENST00000366896 SLC6A18Q96N87 628 aa13.86□□□□□ -0.19
PRKN-204ENST00000366896 GPR34Q9UPC5 381 aa13.86□□□□□ -0.19
PRKN-204ENST00000366896 TBC1D3BA6NDS4 549 aa13.86□□□□□ -0.19
PRKN-204ENST00000366896 RTCAO00442 366 aaKnown RBP13.86□□□□□ -0.19
PRKN-204ENST00000366896 MMP20O60882 483 aa13.86□□□□□ -0.19
PRKN-204ENST00000366896 UQCRC1P31930 480 aa13.86□□□□□ -0.19
PRKN-204ENST00000366896 CTHP32929 405 aa13.86□□□□□ -0.19
PRKN-204ENST00000366896 BCDIN3DQ7Z5W3 292 aaKnown RBP13.86□□□□□ -0.19
PRKN-204ENST00000366896 GLCCI1Q86VQ1 547 aa13.86□□□□□ -0.19
PRKN-204ENST00000366896 RBM45Q8IUH3 476 aaKnown RBP13.86□□□□□ -0.19
PRKN-204ENST00000366896 IQCF2Q8IXL9 164 aa13.86□□□□□ -0.19
PRKN-204ENST00000366896 ADGRF3Q8IZF5 1079 aa13.86□□□□□ -0.19
PRKN-204ENST00000366896 LINC00471Q8N535 108 aa13.86□□□□□ -0.19
PRKN-204ENST00000366896 ATP6V1C2Q8NEY4 427 aa13.86□□□□□ -0.19
PRKN-204ENST00000366896 WFDC6Q9BQY6 131 aa13.86□□□□□ -0.19
PRKN-204ENST00000366896 ACAT2Q9BWD1 397 aa13.86□□□□□ -0.19
PRKN-204ENST00000366896 B3GNT2Q9NY97 397 aa13.86□□□□□ -0.19
PRKN-204ENST00000366896 C5AR2Q9P296 337 aa13.86□□□□□ -0.19
PRKN-204ENST00000366896 TEKT2Q9UIF3 430 aa13.86□□□□□ -0.19
PRKN-204ENST00000366896 MOSPD1Q9UJG1 213 aa13.86□□□□□ -0.19
PRKN-204ENST00000366896 SPEF1Q9Y4P9 236 aa13.86□□□□□ -0.19
PRKN-204ENST00000366896 APODP05090 189 aa13.85□□□□□ -0.19
PRKN-204ENST00000366896 PSKH1P11801 424 aa13.85□□□□□ -0.19
PRKN-204ENST00000366896 KCNJ5P48544 419 aa13.85□□□□□ -0.19
PRKN-204ENST00000366896 MAN2A2P49641 1150 aa13.85□□□□□ -0.19
PRKN-204ENST00000366896 ZNF91Q05481 1191 aa13.85□□□□□ -0.19
PRKN-204ENST00000366896 COX10Q12887 443 aa13.85□□□□□ -0.19
PRKN-204ENST00000366896 TDGQ13569 410 aa13.85□□□□□ -0.19
PRKN-204ENST00000366896 C1DQ13901 141 aaKnown RBP13.85□□□□□ -0.19
PRKN-204ENST00000366896 PRAMEF14Q5SWL7 426 aa13.85□□□□□ -0.19
PRKN-204ENST00000366896 PRAMEF13Q5VWM6 474 aa13.85□□□□□ -0.19
PRKN-204ENST00000366896 KIAA1211LQ6NV74 962 aa13.85□□□□□ -0.19
PRKN-204ENST00000366896 PAQR6Q6TCH4 344 aa13.85□□□□□ -0.19
PRKN-204ENST00000366896 AMIGO1Q86WK6 493 aa13.85□□□□□ -0.19
PRKN-204ENST00000366896 ZNF547Q8IVP9 402 aa13.85□□□□□ -0.19
PRKN-204ENST00000366896 RAB8BQ92930 207 aa13.85□□□□□ -0.19
PRKN-204ENST00000366896 ZNF354BQ96LW1 612 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms