RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 SOX3P41225 446 aa11.2□□□□□ -0.62
CDC42BPA-202ENST00000366764 SNTA1Q13424 505 aa11.2□□□□□ -0.62
CDC42BPA-202ENST00000366764 RAB33AQ14088 237 aa11.2□□□□□ -0.62
CDC42BPA-202ENST00000366764 PUM1Q14671 1186 aaKnown RBP eCLIP11.2□□□□□ -0.622e-6■■□□□ 13.3
CDC42BPA-202ENST00000366764 GPR19Q15760 415 aa11.2□□□□□ -0.62
CDC42BPA-202ENST00000366764 ANKRD54Q6NXT1 300 aa11.2□□□□□ -0.62
CDC42BPA-202ENST00000366764 AMIGO1Q86WK6 493 aa11.2□□□□□ -0.62
CDC42BPA-202ENST00000366764 OR9Q2Q8NGE9 314 aa11.2□□□□□ -0.62
CDC42BPA-202ENST00000366764 RXFP3Q9NSD7 469 aa11.2□□□□□ -0.62
CDC42BPA-202ENST00000366764 MGAT4CQ9UBM8 478 aa11.2□□□□□ -0.62
CDC42BPA-202ENST00000366764 TATDN3Q17R31 274 aa11.2□□□□□ -0.62
CDC42BPA-202ENST00000366764 KLBQ86Z14 1044 aa11.2□□□□□ -0.62
CDC42BPA-202ENST00000366764 HSPA12BQ96MM6 686 aa11.2□□□□□ -0.62
CDC42BPA-202ENST00000366764 OR51J1Q9H342 316 aa11.2□□□□□ -0.62
CDC42BPA-202ENST00000366764 SACM1LQ9NTJ5 587 aa11.2□□□□□ -0.62
CDC42BPA-202ENST00000366764 SLAMF8Q9P0V8 285 aa11.2□□□□□ -0.62
CDC42BPA-202ENST00000366764 TDRD6O60522 2096 aaKnown RBP11.2□□□□□ -0.62
CDC42BPA-202ENST00000366764 PCSK6P29122 969 aa11.2□□□□□ -0.62
CDC42BPA-202ENST00000366764 ABCA11PQ4W5N1 156 aa11.2□□□□□ -0.62
CDC42BPA-202ENST00000366764 PDZD9Q8IXQ8 264 aa11.2□□□□□ -0.62
CDC42BPA-202ENST00000366764 NSMAFQ92636 917 aa11.2□□□□□ -0.62
CDC42BPA-202ENST00000366764 RBFOX1Q9NWB1 397 aaKnown RBP11.2□□□□□ -0.62
CDC42BPA-202ENST00000366764 EMC3Q9P0I2 261 aa11.2□□□□□ -0.62
CDC42BPA-202ENST00000366764 OR5K4A6NMS3 321 aa11.2□□□□□ -0.62
CDC42BPA-202ENST00000366764 SLC31A1O15431 190 aa11.2□□□□□ -0.62
CDC42BPA-202ENST00000366764 CLEC3AO75596 197 aa11.2□□□□□ -0.62
CDC42BPA-202ENST00000366764 GPX2P18283 190 aa11.2□□□□□ -0.62
CDC42BPA-202ENST00000366764 RAB3BP20337 219 aa11.2□□□□□ -0.62
CDC42BPA-202ENST00000366764 ARNTP27540 789 aa11.2□□□□□ -0.62
CDC42BPA-202ENST00000366764 DPP6P42658 865 aa11.2□□□□□ -0.62
CDC42BPA-202ENST00000366764 CCINQ13939 588 aa11.2□□□□□ -0.62
CDC42BPA-202ENST00000366764 GTDC1Q4AE62 458 aa11.2□□□□□ -0.62
CDC42BPA-202ENST00000366764 AKIRIN2Q53H80 203 aa11.2□□□□□ -0.62
CDC42BPA-202ENST00000366764 FAAH2Q6GMR7 532 aa11.2□□□□□ -0.62
CDC42BPA-202ENST00000366764 MDGA1Q8NFP4 955 aa11.2□□□□□ -0.62
CDC42BPA-202ENST00000366764 GPR62Q9BZJ7 368 aa11.2□□□□□ -0.62
CDC42BPA-202ENST00000366764 A0A0G2JN53 185 aa11.2□□□□□ -0.62
CDC42BPA-202ENST00000366764 OR7A10O76100 309 aa11.2□□□□□ -0.62
CDC42BPA-202ENST00000366764 ARAFP10398 606 aa11.2□□□□□ -0.62
CDC42BPA-202ENST00000366764 OR4C11Q6IEV9 310 aa11.2□□□□□ -0.62
CDC42BPA-202ENST00000366764 PGBD2Q6P3X8 592 aa11.2□□□□□ -0.62
CDC42BPA-202ENST00000366764 ARMC5Q96C12 935 aa11.2□□□□□ -0.62
CDC42BPA-202ENST00000366764 PCDHB16Q9NRJ7 776 aa11.2□□□□□ -0.62
CDC42BPA-202ENST00000366764 C14orf166Q9Y224 244 aaKnown RBP11.2□□□□□ -0.62
CDC42BPA-202ENST00000366764 RALGAPA1Q6GYQ0 2036 aa11.2□□□□□ -0.62
CDC42BPA-202ENST00000366764 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.2□□□□□ -0.62
CDC42BPA-202ENST00000366764 OR2A25A4D2G3 310 aa11.2□□□□□ -0.62
CDC42BPA-202ENST00000366764 E7EQ34 232 aa11.2□□□□□ -0.62
CDC42BPA-202ENST00000366764 STK19P49842 368 aaPredicted RBP11.2□□□□□ -0.62
CDC42BPA-202ENST00000366764 CATSPEREQ5SY80 951 aa11.2□□□□□ -0.62
CDC42BPA-202ENST00000366764 PDZD3Q86UT5 571 aa11.2□□□□□ -0.62
CDC42BPA-202ENST00000366764 OR2M4Q96R27 311 aa11.2□□□□□ -0.62
CDC42BPA-202ENST00000366764 RGPD3A6NKT7 1758 aaPredicted RBP11.19□□□□□ -0.62
CDC42BPA-202ENST00000366764 RGPD4Q7Z3J3 1758 aa11.19□□□□□ -0.62
CDC42BPA-202ENST00000366764 ACOT7O00154 380 aa11.19□□□□□ -0.62
CDC42BPA-202ENST00000366764 FAM76BQ5HYJ3 339 aa11.19□□□□□ -0.62
CDC42BPA-202ENST00000366764 UBE2UQ5VVX9 321 aa11.19□□□□□ -0.62
CDC42BPA-202ENST00000366764 SBSNQ6UWP8 590 aa11.19□□□□□ -0.62
CDC42BPA-202ENST00000366764 FAM86B1Q8N7N1 296 aa11.19□□□□□ -0.62
CDC42BPA-202ENST00000366764 SLC38A3Q99624 504 aa11.19□□□□□ -0.62
CDC42BPA-202ENST00000366764 PLCL2Q9UPR0 1127 aa11.19□□□□□ -0.62
CDC42BPA-202ENST00000366764 CACNG2Q9Y698 323 aa11.19□□□□□ -0.62
CDC42BPA-202ENST00000366764 MEGF11A6BM72 1044 aa11.19□□□□□ -0.62
CDC42BPA-202ENST00000366764 C12orf71A8MTZ7 269 aa11.19□□□□□ -0.62
CDC42BPA-202ENST00000366764 ACP2P11117 423 aa11.19□□□□□ -0.62
CDC42BPA-202ENST00000366764 ILKQ13418 452 aa11.19□□□□□ -0.62
CDC42BPA-202ENST00000366764 NDUFAF5Q5TEU4 345 aa11.19□□□□□ -0.62
CDC42BPA-202ENST00000366764 DPPA4Q7L190 304 aa11.19□□□□□ -0.62
CDC42BPA-202ENST00000366764 JAGN1Q8N5M9 183 aa11.19□□□□□ -0.62
CDC42BPA-202ENST00000366764 CLCC1Q96S66 551 aa11.19□□□□□ -0.62
CDC42BPA-202ENST00000366764 ARHGAP39Q9C0H5 1083 aa11.19□□□□□ -0.62
CDC42BPA-202ENST00000366764 HOXD1Q9GZZ0 328 aa11.19□□□□□ -0.62
CDC42BPA-202ENST00000366764 GPR34Q9UPC5 381 aa11.19□□□□□ -0.62
CDC42BPA-202ENST00000366764 TEX13CA0A0J9YWL9 993 aa11.19□□□□□ -0.62
CDC42BPA-202ENST00000366764 CRYZL1O95825 349 aa11.19□□□□□ -0.62
CDC42BPA-202ENST00000366764 RPL10P27635 214 aaKnown RBP11.19□□□□□ -0.62
CDC42BPA-202ENST00000366764 GAL3ST4Q96RP7 486 aa11.19□□□□□ -0.62
CDC42BPA-202ENST00000366764 MTCL1Q9Y4B5 1905 aaKnown RBP11.19□□□□□ -0.62
CDC42BPA-202ENST00000366764 GVINP1Q7Z2Y8 2422 aa11.19□□□□□ -0.62
CDC42BPA-202ENST00000366764 CACNG3O60359 315 aa11.19□□□□□ -0.62
CDC42BPA-202ENST00000366764 RAB12Q6IQ22 244 aa11.19□□□□□ -0.62
CDC42BPA-202ENST00000366764 CREB3L2Q70SY1 520 aa11.19□□□□□ -0.62
CDC42BPA-202ENST00000366764 GALNT10Q86SR1 603 aa11.19□□□□□ -0.62
CDC42BPA-202ENST00000366764 MSANTD3Q96H12 275 aa11.19□□□□□ -0.62
CDC42BPA-202ENST00000366764 MIR1-1HGQ9H1L0 117 aa11.19□□□□□ -0.62
CDC42BPA-202ENST00000366764 TLR9Q9NR96 1032 aa11.19□□□□□ -0.62
CDC42BPA-202ENST00000366764 A0A1B0GVC2 190 aa11.19□□□□□ -0.62
CDC42BPA-202ENST00000366764 GNB5O14775 395 aa11.19□□□□□ -0.62
CDC42BPA-202ENST00000366764 FRKP42685 505 aaPredicted RBP11.19□□□□□ -0.62
CDC42BPA-202ENST00000366764 CYCSP99999 105 aaKnown RBP11.19□□□□□ -0.62
CDC42BPA-202ENST00000366764 EFR3AQ14156 821 aa11.19□□□□□ -0.62
CDC42BPA-202ENST00000366764 SLC8B1Q6J4K2 584 aa11.19□□□□□ -0.62
CDC42BPA-202ENST00000366764 SLC43A2Q8N370 569 aa11.19□□□□□ -0.62
CDC42BPA-202ENST00000366764 OR2T35Q8NGX2 323 aa11.19□□□□□ -0.62
CDC42BPA-202ENST00000366764 FBXL12Q9NXK8 326 aa11.19□□□□□ -0.62
CDC42BPA-202ENST00000366764 DNMT3AQ9Y6K1 912 aaPredicted RBP11.19□□□□□ -0.62
CDC42BPA-202ENST00000366764 ADORA3P0DMS8 318 aa11.19□□□□□ -0.62
CDC42BPA-202ENST00000366764 PVALBP20472 110 aaPredicted RBP11.19□□□□□ -0.62
CDC42BPA-202ENST00000366764 TCEA1P23193 301 aaKnown RBP11.19□□□□□ -0.62
CDC42BPA-202ENST00000366764 CDKN1CP49918 316 aaPredicted RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms